RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W TY2B-BQ12491 1770 aa3.82□□□□□ -1.8
MSH2YOL090W CAN1P04817 590 aa3.81□□□□□ -1.8
MSH2YOL090W GUT2P32191 649 aa3.81□□□□□ -1.8
MSH2YOL090W NGR1P32831 672 aaKnown RBP3.81□□□□□ -1.8
MSH2YOL090W MFT1P33441 392 aaKnown RBP3.81□□□□□ -1.8
MSH2YOL090W RPS0BP46654 252 aaKnown RBP3.81□□□□□ -1.8
MSH2YOL090W ESF2P53743 316 aaKnown RBP3.81□□□□□ -1.8
MSH2YOL090W UFD2P54860 961 aa3.81□□□□□ -1.8
MSH2YOL090W PUS5Q06244 254 aa3.81□□□□□ -1.8
MSH2YOL090W ESC2Q06340 456 aa3.81□□□□□ -1.8
MSH2YOL090W HIR1P32479 840 aa3.81□□□□□ -1.8
MSH2YOL090W ATG3P40344 310 aa3.81□□□□□ -1.8
MSH2YOL090W GPG1P53130 126 aa3.81□□□□□ -1.8
MSH2YOL090W BDS1Q08347 646 aa3.81□□□□□ -1.8
MSH2YOL090W SNU66Q12420 587 aaPredicted RBP3.81□□□□□ -1.8
MSH2YOL090W SRF1Q12516 437 aa3.81□□□□□ -1.8
MSH2YOL090W TRM3Q07527 1436 aa3.81□□□□□ -1.8
MSH2YOL090W RPO21P04050 1733 aaKnown RBP3.81□□□□□ -1.8
MSH2YOL090W DAL5P15365 543 aa3.81□□□□□ -1.8
MSH2YOL090W NPL4P33755 580 aa3.81□□□□□ -1.8
MSH2YOL090W PTC2P39966 464 aaKnown RBP3.81□□□□□ -1.8
MSH2YOL090W YNL011CP53980 444 aa3.81□□□□□ -1.8
MSH2YOL090W SPO14P36126 1683 aa3.8□□□□□ -1.8
MSH2YOL090W NTH2P35172 780 aa3.8□□□□□ -1.8
MSH2YOL090W YKL222CP35995 705 aa3.8□□□□□ -1.8
MSH2YOL090W APP1P53933 587 aa3.8□□□□□ -1.8
MSH2YOL090W YRF1-1P0CX20 1796 aa3.8□□□□□ -1.8
MSH2YOL090W YRF1-5P0CX21 1796 aa3.8□□□□□ -1.8
MSH2YOL090W YRF1-8P0CX22 1796 aa3.8□□□□□ -1.8
MSH2YOL090W CYT1P07143 309 aa3.8□□□□□ -1.8
MSH2YOL090W PRE9P23638 258 aaKnown RBP3.8□□□□□ -1.8
MSH2YOL090W MSH2P25847 964 aa3.8□□□□□ -1.8
MSH2YOL090W NIT1P40447 199 aa3.8□□□□□ -1.8
MSH2YOL090W GPP1P41277 250 aaKnown RBP3.8□□□□□ -1.8
MSH2YOL090W EMW1P42842 904 aaKnown RBP3.8□□□□□ -1.8
MSH2YOL090W SAM37P50110 327 aa3.8□□□□□ -1.8
MSH2YOL090W ATP4P05626 244 aa3.79□□□□□ -1.8
MSH2YOL090W UGA4P32837 571 aa3.79□□□□□ -1.8
MSH2YOL090W YBR184WP38299 523 aa3.79□□□□□ -1.8
MSH2YOL090W YHL008CP38750 627 aa3.79□□□□□ -1.8
MSH2YOL090W CLA4P48562 842 aa3.79□□□□□ -1.8
MSH2YOL090W YGR237CP50089 785 aa3.79□□□□□ -1.8
MSH2YOL090W MAL11P53048 616 aa3.79□□□□□ -1.8
MSH2YOL090W YGR125WP53273 1036 aa3.79□□□□□ -1.8
MSH2YOL090W YPQ2Q06328 317 aa3.79□□□□□ -1.8
MSH2YOL090W DOP1Q03921 1698 aa3.79□□□□□ -1.8
MSH2YOL090W DRS2P39524 1355 aa3.79□□□□□ -1.8
MSH2YOL090W MAL31P38156 614 aa3.79□□□□□ -1.8
MSH2YOL090W HXT5P38695 592 aa3.79□□□□□ -1.8
MSH2YOL090W DAS1P47005 663 aa3.79□□□□□ -1.8
MSH2YOL090W COG6P53959 839 aa3.79□□□□□ -1.8
MSH2YOL090W YNL034WP53963 612 aa3.79□□□□□ -1.8
MSH2YOL090W YNL018CP53976 612 aa3.79□□□□□ -1.8
MSH2YOL090W TMA7Q3E764 64 aaKnown RBP3.79□□□□□ -1.8
MSH2YOL090W TY1B-DR3Q99231 1755 aa3.78□□□□□ -1.8
MSH2YOL090W VPS15P22219 1454 aa3.78□□□□□ -1.8
MSH2YOL090W IES1P43579 692 aa3.78□□□□□ -1.8
MSH2YOL090W PFD1P46988 109 aa3.78□□□□□ -1.8
MSH2YOL090W RTA1P53047 317 aa3.78□□□□□ -1.8
MSH2YOL090W YNL165WP53891 406 aa3.78□□□□□ -1.8
MSH2YOL090W EEB1Q02891 456 aa3.78□□□□□ -1.8
MSH2YOL090W SWI5P08153 709 aa3.78□□□□□ -1.8
MSH2YOL090W RPL8BP29453 256 aaKnown RBP3.78□□□□□ -1.8
MSH2YOL090W RLP24Q07915 199 aaKnown RBP3.78□□□□□ -1.8
MSH2YOL090W OXR1Q08952 273 aa3.78□□□□□ -1.8
MSH2YOL090W DPB3P27344 201 aa3.77□□□□□ -1.81
MSH2YOL090W RPS0AP32905 252 aaKnown RBP3.77□□□□□ -1.81
MSH2YOL090W SUT1P53032 299 aaKnown RBP3.77□□□□□ -1.81
MSH2YOL090W RSC4Q02206 625 aa3.77□□□□□ -1.81
MSH2YOL090W NOC3Q07896 663 aaPredicted RBP3.77□□□□□ -1.81
MSH2YOL090W MPD2Q99316 277 aa3.77□□□□□ -1.81
MSH2YOL090W NPR1P22211 790 aa3.77□□□□□ -1.81
MSH2YOL090W PUF4P25339 888 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
MSH2YOL090W MTC2P34246 357 aa3.77□□□□□ -1.81
MSH2YOL090W BET3P36149 193 aa3.77□□□□□ -1.81
MSH2YOL090W TFB2Q02939 513 aa3.77□□□□□ -1.81
MSH2YOL090W DAL4Q04895 635 aa3.77□□□□□ -1.81
MSH2YOL090W RRI2Q12348 645 aa3.77□□□□□ -1.81
MSH2YOL090W GCR1P07261 785 aa3.77□□□□□ -1.81
MSH2YOL090W RPS6AP0CX37 236 aaKnown RBP3.77□□□□□ -1.81
MSH2YOL090W RPS6BP0CX38 236 aaPredicted RBP3.77□□□□□ -1.81
MSH2YOL090W PIC2P40035 300 aa3.77□□□□□ -1.81
MSH2YOL090W MDM1Q01846 1127 aa3.77□□□□□ -1.81
MSH2YOL090W TAF8Q03750 510 aa3.77□□□□□ -1.81
MSH2YOL090W VMS1Q04311 632 aaKnown RBP3.77□□□□□ -1.81
MSH2YOL090W ATG20Q07528 640 aa3.77□□□□□ -1.81
MSH2YOL090W FAL1Q12099 399 aaKnown RBP3.77□□□□□ -1.81
MSH2YOL090W NYV1Q12255 253 aa3.77□□□□□ -1.81
MSH2YOL090W KIP2P28743 706 aa3.76□□□□□ -1.81
MSH2YOL090W NAB2P32505 525 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
MSH2YOL090W MRPS18P42847 217 aa3.76□□□□□ -1.81
MSH2YOL090W ALO1P54783 526 aaKnown RBP3.76□□□□□ -1.81
MSH2YOL090W BSC2Q05611 235 aa3.76□□□□□ -1.81
MSH2YOL090W NUP170P38181 1502 aa3.76□□□□□ -1.81
MSH2YOL090W PGI1P12709 554 aaKnown RBP3.76□□□□□ -1.81
MSH2YOL090W BAS1P22035 811 aa3.76□□□□□ -1.81
MSH2YOL090W MRT4P33201 236 aaKnown RBP3.76□□□□□ -1.81
MSH2YOL090W YBR071WP38243 211 aa3.76□□□□□ -1.81
MSH2YOL090W FAF1P40546 346 aaPredicted RBP3.76□□□□□ -1.81
MSH2YOL090W YJR115WP47152 169 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms