RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	MGR3	Q04472	501 aa		4.64	□□□□□ -1.67
VAC7	YNL054W	RSA3	Q05942	220 aa	Known RBP	4.64	□□□□□ -1.67
VAC7	YNL054W	PSR2	Q07949	397 aa		4.64	□□□□□ -1.67
VAC7	YNL054W	RPS19A	P07280	144 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	RPS19B	P07281	144 aa	Predicted RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	YEL043W	P32618	956 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	SEC8	P32855	1065 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	KES1	P35844	434 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	SET1	P38827	1080 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	STR2	P47164	639 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	YPT11	P48559	417 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	IST1	P53843	298 aa	Predicted RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	ATP25	Q03153	612 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	TAP42	Q04372	366 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	YMR114C	Q04471	368 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	BRE1	Q07457	700 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	CHS5	Q12114	671 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	RUP1	Q12242	671 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	CDC25	P04821	1589 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	PRT1	P06103	763 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	SUI3	P09064	285 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	RPS6A	P0CX37	236 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	RPS6B	P0CX38	236 aa	Predicted RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	SBP1	P10080	294 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	CDC48	P25694	835 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	BRF1	P29056	596 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	ECM21	P38167	1117 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	MCM6	P53091	1017 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	HOP2	P53187	214 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	OPY2	Q06810	360 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	PSK2	Q08217	1101 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	VMA2	P16140	517 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	PAP1	P29468	568 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	STE13	P33894	931 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	ADE17	P38009	592 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	PSY4	P38193	441 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	YSW1	P38280	609 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	PTA1	Q01329	785 aa	Predicted RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	UTP14	Q04500	899 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	FAR8	Q05040	523 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	RRP9	Q06506	573 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	BDF2	Q07442	638 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	YOR389W	Q08912	624 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	DBP10	Q12389	995 aa	Known RBP	4.63	□□□□□ -1.67
VAC7	YNL054W	YSP2	Q06681	1438 aa		4.63	□□□□□ -1.67
VAC7	YNL054W	COQ4	O13525	335 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	PWP1	P21304	576 aa	Known RBP	4.62	□□□□□ -1.67
VAC7	YNL054W	MAM1	P40065	302 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	ALR1	Q08269	859 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	YBT1	P32386	1661 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	SNF2	P22082	1703 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	CDC16	P09798	840 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	MRP7	P12687	371 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	UGA3	P26370	528 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	EFB1	P32471	206 aa	Known RBP	4.62	□□□□□ -1.67
VAC7	YNL054W	YEL1	P34225	687 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	LHS1	P36016	881 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	MRPS35	P53292	345 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	PLP1	Q04004	230 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	DPL1	Q05567	589 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	MPC54	Q08550	464 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	ZRT2	Q12436	422 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	SEM1	O94742	89 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	REC107	P21651	314 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	CBF2	P32504	956 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	CNS1	P33313	385 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	NPL4	P33755	580 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	NUP60	P39705	539 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	SUM1	P46676	1062 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	UTP5	Q04177	643 aa	Known RBP	4.62	□□□□□ -1.67
VAC7	YNL054W	CSC1	Q06538	782 aa		4.62	□□□□□ -1.67
VAC7	YNL054W	TY4B-P	A0A0B7P3V8	1104 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	ARG4	P04076	463 aa	Predicted RBP	4.61	□□□□□ -1.67
VAC7	YNL054W	YMR085W	P0CF18	432 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	STE11	P23561	717 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	OXP1	P28273	1286 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	PPH3	P32345	308 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	ETP1	P38748	585 aa	Known RBP	4.61	□□□□□ -1.67
VAC7	YNL054W	PIH1	P38768	344 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	SUB1	P54000	292 aa	Known RBP	4.61	□□□□□ -1.67
VAC7	YNL054W	UME1	Q03010	460 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	HFD1	Q04458	532 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	IES3	Q12345	250 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	GVP36	P40531	326 aa	Known RBP	4.61	□□□□□ -1.67
VAC7	YNL054W	SHE4	P51534	789 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	MAL13	P53338	473 aa		4.61	□□□□□ -1.67
VAC7	YNL054W	MCM4	P30665	933 aa	Known RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	YET1	P35723	206 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	HFM1	P51979	1187 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	STE20	Q03497	939 aa	Known RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	MET7	Q08645	548 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	RPL24A	P04449	155 aa	Known RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	SMC1	P32908	1225 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	UBC6	P33296	250 aa	Predicted RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	TIF3	P34167	436 aa	Known RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	VID30	P53076	958 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	CPR6	P53691	371 aa	Known RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	ASI1	P54074	624 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	SPC24	Q04477	213 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	SOV1	Q04748	898 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms