RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W CLP1Q08685 445 aaPredicted RBP6.51□□□□□ -1.37
SKN1YGR143W MSH1P25846 959 aa6.51□□□□□ -1.37
SKN1YGR143W PTH2P34222 208 aa6.51□□□□□ -1.37
SKN1YGR143W DSD1P53095 428 aa6.51□□□□□ -1.37
SKN1YGR143W ERB1Q04660 807 aaKnown RBP6.51□□□□□ -1.37
SKN1YGR143W ARR2Q06597 130 aa6.51□□□□□ -1.37
SKN1YGR143W AOS1Q06624 347 aa6.51□□□□□ -1.37
SKN1YGR143W YDL073WQ07454 984 aa6.51□□□□□ -1.37
SKN1YGR143W SEC15P22224 910 aa6.5□□□□□ -1.37
SKN1YGR143W HSP104P31539 908 aaKnown RBP6.5□□□□□ -1.37
SKN1YGR143W MUM2P38236 366 aa6.5□□□□□ -1.37
SKN1YGR143W RAD17P48581 401 aa6.5□□□□□ -1.37
SKN1YGR143W MSN5P52918 1224 aa6.5□□□□□ -1.37
SKN1YGR143W SSQ1Q05931 657 aaPredicted RBP6.5□□□□□ -1.37
SKN1YGR143W PMT7Q06644 662 aa6.5□□□□□ -1.37
SKN1YGR143W HMI1Q12039 706 aa6.5□□□□□ -1.37
SKN1YGR143W DLD1P32891 587 aa6.5□□□□□ -1.37
SKN1YGR143W MPH3P0CE00 602 aa6.49□□□□□ -1.37
SKN1YGR143W NFU1P32860 256 aa6.49□□□□□ -1.37
SKN1YGR143W TBS1P38114 1094 aa6.49□□□□□ -1.37
SKN1YGR143W YHR218WP38899 603 aa6.49□□□□□ -1.37
SKN1YGR143W SET2P46995 733 aaKnown RBP6.49□□□□□ -1.37
SKN1YGR143W STE20Q03497 939 aaKnown RBP6.49□□□□□ -1.37
SKN1YGR143W YPL225WQ08971 146 aaKnown RBP6.49□□□□□ -1.37
SKN1YGR143W CDC37P06101 506 aaKnown RBP6.49□□□□□ -1.37
SKN1YGR143W PET494P07390 489 aaPredicted RBP6.49□□□□□ -1.37
SKN1YGR143W CSE1P33307 960 aa6.49□□□□□ -1.37
SKN1YGR143W BLI1P35727 113 aa6.49□□□□□ -1.37
SKN1YGR143W AKL1P38080 1108 aaKnown RBP6.49□□□□□ -1.37
SKN1YGR143W RFC1P38630 861 aaKnown RBP6.49□□□□□ -1.37
SKN1YGR143W MEP1P40260 492 aa6.49□□□□□ -1.37
SKN1YGR143W MET18P40469 1032 aa6.49□□□□□ -1.37
SKN1YGR143W RRP46P53256 223 aaPredicted RBP6.49□□□□□ -1.37
SKN1YGR143W MSB4Q12317 492 aa6.49□□□□□ -1.37
SKN1YGR143W TY4A-HQ6Q5P6 413 aa6.49□□□□□ -1.37
SKN1YGR143W KAR9P32526 644 aa6.48□□□□□ -1.37
SKN1YGR143W SMY2P32909 740 aaKnown RBP6.48□□□□□ -1.37
SKN1YGR143W UBP14P38237 781 aaKnown RBP6.48□□□□□ -1.37
SKN1YGR143W CEP3P40969 608 aa6.48□□□□□ -1.37
SKN1YGR143W YGL081WP53156 320 aa6.48□□□□□ -1.37
SKN1YGR143W INP2Q03824 705 aa6.48□□□□□ -1.37
SKN1YGR143W NOC3Q07896 663 aaPredicted RBP6.48□□□□□ -1.37
SKN1YGR143W TLG2Q08144 397 aa6.48□□□□□ -1.37
SKN1YGR143W MPC54Q08550 464 aa6.48□□□□□ -1.37
SKN1YGR143W IOC2Q12072 812 aa6.48□□□□□ -1.37
SKN1YGR143W MAK16P10962 306 aaPredicted RBP6.48□□□□□ -1.37
SKN1YGR143W MRPS28P21771 286 aa6.48□□□□□ -1.37
SKN1YGR143W PWP2P25635 923 aaKnown RBP6.48□□□□□ -1.37
SKN1YGR143W SEC66P33754 206 aa6.48□□□□□ -1.37
SKN1YGR143W PET112P33893 541 aa6.48□□□□□ -1.37
SKN1YGR143W ARB1P40024 610 aaKnown RBP6.48□□□□□ -1.37
SKN1YGR143W MAD1P40957 749 aa6.48□□□□□ -1.37
SKN1YGR143W STU2P46675 888 aa6.48□□□□□ -1.37
SKN1YGR143W TUM1Q08686 304 aaKnown RBP6.48□□□□□ -1.37
SKN1YGR143W PUF4P25339 888 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
SKN1YGR143W VPS35P34110 944 aa6.47□□□□□ -1.37
SKN1YGR143W ATG19P35193 415 aa6.47□□□□□ -1.37
SKN1YGR143W OSH3P38713 996 aaKnown RBP6.47□□□□□ -1.37
SKN1YGR143W SPC72P39723 622 aa6.47□□□□□ -1.37
SKN1YGR143W DNL4Q08387 944 aaPredicted RBP6.47□□□□□ -1.37
SKN1YGR143W SNU66Q12420 587 aaPredicted RBP6.47□□□□□ -1.37
SKN1YGR143W PDR18P53756 1333 aa6.47□□□□□ -1.37
SKN1YGR143W PEP12P32854 288 aa6.47□□□□□ -1.37
SKN1YGR143W BDF1P35817 686 aa6.47□□□□□ -1.37
SKN1YGR143W RKM3P38222 552 aa6.47□□□□□ -1.37
SKN1YGR143W PMC1P38929 1173 aaPredicted RBP6.47□□□□□ -1.37
SKN1YGR143W SWD1P39706 426 aa6.47□□□□□ -1.37
SKN1YGR143W VHR2P40041 505 aa6.47□□□□□ -1.37
SKN1YGR143W YIG1Q08956 461 aa6.47□□□□□ -1.37
SKN1YGR143W GRE2Q12068 342 aaKnown RBP6.47□□□□□ -1.37
SKN1YGR143W BUD27P43573 796 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
SKN1YGR143W YBP2P53169 641 aa6.46□□□□□ -1.38
SKN1YGR143W FMP30Q02883 468 aa6.46□□□□□ -1.38
SKN1YGR143W PNG1Q02890 363 aa6.46□□□□□ -1.38
SKN1YGR143W STE11P23561 717 aa6.45□□□□□ -1.38
SKN1YGR143W PHO84P25297 587 aaKnown RBP6.45□□□□□ -1.38
SKN1YGR143W PAP1P29468 568 aaKnown RBP6.45□□□□□ -1.38
SKN1YGR143W NIP100P33420 868 aa6.45□□□□□ -1.38
SKN1YGR143W ORM1P53224 222 aa6.45□□□□□ -1.38
SKN1YGR143W RTC4P53850 401 aa6.45□□□□□ -1.38
SKN1YGR143W FUS2Q05670 677 aa6.45□□□□□ -1.38
SKN1YGR143W GNT1Q12096 491 aa6.45□□□□□ -1.38
SKN1YGR143W GRX1P25373 110 aaKnown RBP6.45□□□□□ -1.38
SKN1YGR143W TPD3P31383 635 aa6.45□□□□□ -1.38
SKN1YGR143W MET4P32389 672 aa6.45□□□□□ -1.38
SKN1YGR143W ERP2P39704 215 aa6.45□□□□□ -1.38
SKN1YGR143W BOI2P39969 1040 aa6.45□□□□□ -1.38
SKN1YGR143W YJR142WP47173 342 aa6.45□□□□□ -1.38
SKN1YGR143W UBX5Q06682 500 aa6.45□□□□□ -1.38
SKN1YGR143W YDL121CQ07541 149 aa6.45□□□□□ -1.38
SKN1YGR143W YKL068W-AQ3E826 78 aa6.45□□□□□ -1.38
SKN1YGR143W RAD4P14736 754 aa6.44□□□□□ -1.38
SKN1YGR143W MFT1P33441 392 aaKnown RBP6.44□□□□□ -1.38
SKN1YGR143W APD1P38281 316 aa6.44□□□□□ -1.38
SKN1YGR143W OCA5P38738 679 aa6.44□□□□□ -1.38
SKN1YGR143W ATG3P40344 310 aa6.44□□□□□ -1.38
SKN1YGR143W ENP2P48234 707 aaKnown RBP6.44□□□□□ -1.38
SKN1YGR143W GPI8P49018 411 aa6.44□□□□□ -1.38
SKN1YGR143W NOP15P53927 220 aaPredicted RBP6.44□□□□□ -1.38
SKN1YGR143W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms