RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C MET1P36150 593 aa7.08□□□□□ -1.28
VPS61YDR136C YMR147WP40218 223 aaKnown RBP7.08□□□□□ -1.28
VPS61YDR136C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
VPS61YDR136C VMS1Q04311 632 aaKnown RBP7.08□□□□□ -1.28
VPS61YDR136C COG4Q06096 861 aa7.08□□□□□ -1.28
VPS61YDR136C ESF1Q06344 628 aaKnown RBP7.08□□□□□ -1.28
VPS61YDR136C FIG2P25653 1609 aa7.08□□□□□ -1.28
VPS61YDR136C PIF1P07271 859 aa7.07□□□□□ -1.28
VPS61YDR136C KIN1P13185 1064 aa7.07□□□□□ -1.28
VPS61YDR136C CBP3P21560 335 aa7.07□□□□□ -1.28
VPS61YDR136C CRG1P38892 291 aaRIP-Chip data7.07□□□□□ -1.28not detected
VPS61YDR136C EPL1P43572 832 aa7.07□□□□□ -1.28
VPS61YDR136C FAR11P53917 953 aa7.07□□□□□ -1.28
VPS61YDR136C VPS60Q03390 229 aa7.07□□□□□ -1.28
VPS61YDR136C KAR5Q04746 504 aa7.07□□□□□ -1.28
VPS61YDR136C TAH18Q12181 623 aa7.07□□□□□ -1.28
VPS61YDR136C PFK2P16862 959 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
VPS61YDR136C MRC1P25588 1096 aa7.06□□□□□ -1.28
VPS61YDR136C MCM4P30665 933 aaKnown RBP7.06□□□□□ -1.28
VPS61YDR136C PSY4P38193 441 aa7.06□□□□□ -1.28
VPS61YDR136C ENP2P48234 707 aaKnown RBP7.06□□□□□ -1.28
VPS61YDR136C YGR130CP53278 816 aa7.06□□□□□ -1.28
VPS61YDR136C VPS75P53853 264 aa7.06□□□□□ -1.28
VPS61YDR136C ENV9Q08651 330 aa7.06□□□□□ -1.28
VPS61YDR136C HXK1P04806 485 aaKnown RBP7.05□□□□□ -1.28
VPS61YDR136C STE11P23561 717 aa7.05□□□□□ -1.28
VPS61YDR136C PRE3P38624 215 aa7.05□□□□□ -1.28
VPS61YDR136C NOC2P39744 710 aaKnown RBP7.05□□□□□ -1.28
VPS61YDR136C SMC3P47037 1230 aa7.05□□□□□ -1.28
VPS61YDR136C YGL082WP53155 381 aa7.05□□□□□ -1.28
VPS61YDR136C BNI4P53858 892 aa7.05□□□□□ -1.28
VPS61YDR136C ALD3P54114 506 aa7.05□□□□□ -1.28
VPS61YDR136C YPR109WQ06104 294 aa7.05□□□□□ -1.28
VPS61YDR136C SPN1Q06505 410 aaPredicted RBP7.05□□□□□ -1.28
VPS61YDR136C YCG1Q06680 1035 aa7.05□□□□□ -1.28
VPS61YDR136C RRI2Q12348 645 aa7.05□□□□□ -1.28
VPS61YDR136C CHL1P22516 861 aaPredicted RBP7.04□□□□□ -1.28
VPS61YDR136C SPT23P35210 1082 aa7.04□□□□□ -1.28
VPS61YDR136C RPN10P38886 268 aaKnown RBP7.04□□□□□ -1.28
VPS61YDR136C STR2P47164 639 aa7.04□□□□□ -1.28
VPS61YDR136C SRC1Q03707 834 aa7.04□□□□□ -1.28
VPS61YDR136C APL4Q12028 832 aa7.04□□□□□ -1.28
VPS61YDR136C YRR1Q12172 810 aa7.04□□□□□ -1.28
VPS61YDR136C NOP14Q99207 810 aaKnown RBP7.04□□□□□ -1.28
VPS61YDR136C COBP00163 385 aa7.03□□□□□ -1.28
VPS61YDR136C HSP82P02829 709 aaKnown RBP7.03□□□□□ -1.28
VPS61YDR136C RGP1P16664 663 aa7.03□□□□□ -1.28
VPS61YDR136C PHO13P19881 312 aa7.03□□□□□ -1.28
VPS61YDR136C CDC15P27636 974 aa7.03□□□□□ -1.28
VPS61YDR136C URA1P28272 314 aaPredicted RBP7.03□□□□□ -1.28
VPS61YDR136C YKR075CP36155 307 aa7.03□□□□□ -1.28
VPS61YDR136C HAL5P38970 855 aaKnown RBP7.03□□□□□ -1.28
VPS61YDR136C RAD26P40352 1085 aa7.03□□□□□ -1.28
VPS61YDR136C CUE3P53137 624 aaKnown RBP7.03□□□□□ -1.28
VPS61YDR136C EST2Q06163 884 aa7.03□□□□□ -1.28
VPS61YDR136C TMA16Q08687 178 aa7.03□□□□□ -1.28
VPS61YDR136C CTI6Q08923 506 aa7.03□□□□□ -1.28
VPS61YDR136C DCS2Q12123 353 aa7.03□□□□□ -1.28
VPS61YDR136C PET123P17558 318 aa7.02□□□□□ -1.29
VPS61YDR136C ASF1P32447 279 aa7.02□□□□□ -1.29
VPS61YDR136C NPL4P33755 580 aa7.02□□□□□ -1.29
VPS61YDR136C BMH2P34730 273 aaKnown RBP7.02□□□□□ -1.29
VPS61YDR136C RER2P35196 286 aa7.02□□□□□ -1.29
VPS61YDR136C PXL1P36166 706 aa7.02□□□□□ -1.29
VPS61YDR136C AKR1P39010 764 aa7.02□□□□□ -1.29
VPS61YDR136C OSW7P43611 510 aa7.02□□□□□ -1.29
VPS61YDR136C IRC8P47046 822 aa7.02□□□□□ -1.29
VPS61YDR136C PRP31P49704 494 aaPredicted RBP7.02□□□□□ -1.29
VPS61YDR136C FOX2Q02207 900 aaKnown RBP7.02□□□□□ -1.29
VPS61YDR136C PPM2Q08282 695 aa7.02□□□□□ -1.29
VPS61YDR136C SWI4P25302 1093 aaKnown RBP7.01□□□□□ -1.29
VPS61YDR136C SER1P33330 395 aaKnown RBP7.01□□□□□ -1.29
VPS61YDR136C GEF1P37020 779 aa7.01□□□□□ -1.29
VPS61YDR136C GLO3P38682 493 aaKnown RBP7.01□□□□□ -1.29
VPS61YDR136C GFD1Q04839 188 aaKnown RBP7.01□□□□□ -1.29
VPS61YDR136C YDR344CQ05510 147 aa7.01□□□□□ -1.29
VPS61YDR136C IMH1Q06704 911 aaKnown RBP7.01□□□□□ -1.29
VPS61YDR136C GET3Q12154 354 aaKnown RBP7.01□□□□□ -1.29
VPS61YDR136C MCM16Q12262 181 aa7.01□□□□□ -1.29
VPS61YDR136C HAT1Q12341 374 aa7.01□□□□□ -1.29
VPS61YDR136C UBC1P21734 215 aaKnown RBP7□□□□□ -1.29
VPS61YDR136C MCM3P24279 971 aaKnown RBP7□□□□□ -1.29
VPS61YDR136C BMH1P29311 267 aaKnown RBP7□□□□□ -1.29
VPS61YDR136C PCH2P38126 564 aa7□□□□□ -1.29
VPS61YDR136C PTC2P39966 464 aaKnown RBP7□□□□□ -1.29
VPS61YDR136C MSH4P40965 878 aaPredicted RBP7□□□□□ -1.29
VPS61YDR136C IOC3P43596 787 aa7□□□□□ -1.29
VPS61YDR136C ALF1P53904 254 aa7□□□□□ -1.29
VPS61YDR136C MRS2Q01926 470 aa7□□□□□ -1.29
VPS61YDR136C NYV1Q12255 253 aa7□□□□□ -1.29
VPS61YDR136C CDC6P09119 513 aa6.99□□□□□ -1.29
VPS61YDR136C COQ1P18900 473 aa6.99□□□□□ -1.29
VPS61YDR136C HCA4P20448 770 aaKnown RBP6.99□□□□□ -1.29
VPS61YDR136C DPB3P27344 201 aa6.99□□□□□ -1.29
VPS61YDR136C ADE17P38009 592 aaKnown RBP6.99□□□□□ -1.29
VPS61YDR136C DOT5P40553 215 aa6.99□□□□□ -1.29
VPS61YDR136C APT1P49435 187 aaKnown RBP6.99□□□□□ -1.29
VPS61YDR136C MAL13P53338 473 aa6.99□□□□□ -1.29
VPS61YDR136C HCR1Q05775 265 aaKnown RBP6.99□□□□□ -1.29
VPS61YDR136C UTP13Q05946 817 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms