RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W RXT2P38255 430 aa8.03□□□□□ -1.12
CDC7YDL017W FYV10P40492 516 aa8.03□□□□□ -1.12
CDC7YDL017W MSH4P40965 878 aaPredicted RBP8.03□□□□□ -1.12
CDC7YDL017W ALG2P43636 503 aa8.03□□□□□ -1.12
CDC7YDL017W GDE1Q02979 1223 aa8.03□□□□□ -1.12
CDC7YDL017W MYO5Q04439 1219 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W YPL260WQ08977 551 aa8.03□□□□□ -1.12
CDC7YDL017W RAD61Q99359 647 aa8.03□□□□□ -1.12
CDC7YDL017W RPL22AP05749 121 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W SES1P07284 462 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W CYC8P14922 966 aa8.03□□□□□ -1.12
CDC7YDL017W RNR3P21672 869 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W RIT1P23796 513 aa8.03□□□□□ -1.12
CDC7YDL017W URA1P28272 314 aaPredicted RBP8.03□□□□□ -1.12
CDC7YDL017W PRO3P32263 286 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W YKR023WP36119 530 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W VID27P40157 782 aa8.03□□□□□ -1.12
CDC7YDL017W PCI8P40512 444 aa8.03□□□□□ -1.12
CDC7YDL017W APL6P46682 809 aa8.03□□□□□ -1.12
CDC7YDL017W CUE3P53137 624 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W TIM50Q02776 476 aa8.03□□□□□ -1.12
CDC7YDL017W PRP42Q03776 544 aaKnown RBP8.03□□□□□ -1.12
CDC7YDL017W HKR1P41809 1802 aa8.02□□□□□ -1.13
CDC7YDL017W YKL222CP35995 705 aa8.02□□□□□ -1.13
CDC7YDL017W MNN4P36044 1178 aa8.02□□□□□ -1.13
CDC7YDL017W MSN5P52918 1224 aa8.02□□□□□ -1.13
CDC7YDL017W GAS5Q08193 484 aa8.02□□□□□ -1.13
CDC7YDL017W GRX6Q12438 231 aa8.02□□□□□ -1.13
CDC7YDL017W MCM3P24279 971 aaKnown RBP8.01□□□□□ -1.13
CDC7YDL017W GSM1P42950 618 aa8.01□□□□□ -1.13
CDC7YDL017W NOC2P39744 710 aaKnown RBP8□□□□□ -1.13
CDC7YDL017W PUS6P53294 404 aa8□□□□□ -1.13
CDC7YDL017W RPT6Q01939 405 aaKnown RBP8□□□□□ -1.13
CDC7YDL017W WAR1Q03631 944 aa8□□□□□ -1.13
CDC7YDL017W TFC8Q12308 588 aa8□□□□□ -1.13
CDC7YDL017W CEX1Q12453 761 aa8□□□□□ -1.13
CDC7YDL017W PTC5Q12511 572 aa8□□□□□ -1.13
CDC7YDL017W MET6P05694 767 aaKnown RBP7.99□□□□□ -1.13
CDC7YDL017W TFG2P41896 400 aaPredicted RBP7.99□□□□□ -1.13
CDC7YDL017W YDR341CQ05506 607 aaKnown RBP7.99□□□□□ -1.13
CDC7YDL017W ESC2Q06340 456 aa7.99□□□□□ -1.13
CDC7YDL017W CSC1Q06538 782 aa7.99□□□□□ -1.13
CDC7YDL017W KEL3Q08979 651 aaPredicted RBP7.99□□□□□ -1.13
CDC7YDL017W BMH1P29311 267 aaKnown RBP7.98□□□□□ -1.13
CDC7YDL017W PSY4P38193 441 aa7.98□□□□□ -1.13
CDC7YDL017W STU2P46675 888 aa7.98□□□□□ -1.13
CDC7YDL017W YGL138CP53122 345 aa7.98□□□□□ -1.13
CDC7YDL017W NAF1P53919 492 aaKnown RBP7.98□□□□□ -1.13
CDC7YDL017W NBL1Q3E7Y6 73 aa7.98□□□□□ -1.13
CDC7YDL017W RPS7AP26786 190 aaKnown RBP7.98□□□□□ -1.13
CDC7YDL017W OXP1P28273 1286 aa7.98□□□□□ -1.13
CDC7YDL017W VPS8P39702 1274 aa7.98□□□□□ -1.13
CDC7YDL017W TIF4632P39936 914 aaKnown RBP7.98□□□□□ -1.13
CDC7YDL017W EAF6P47128 113 aa7.98□□□□□ -1.13
CDC7YDL017W KIN4Q01919 800 aa7.98□□□□□ -1.13
CDC7YDL017W EIS1Q05050 843 aaKnown RBP7.98□□□□□ -1.13
CDC7YDL017W MMR1Q06324 491 aa7.98□□□□□ -1.13
CDC7YDL017W ACK1Q07622 623 aaPredicted RBP7.98□□□□□ -1.13
CDC7YDL017W CTT1P06115 562 aa7.97□□□□□ -1.13
CDC7YDL017W ALG1P16661 449 aa7.97□□□□□ -1.13
CDC7YDL017W ICL1P28240 557 aaPredicted RBP7.97□□□□□ -1.13
CDC7YDL017W YKU70P32807 602 aa7.97□□□□□ -1.13
CDC7YDL017W DPL1Q05567 589 aa7.97□□□□□ -1.13
CDC7YDL017W TIP41Q12199 356 aa7.97□□□□□ -1.13
CDC7YDL017W FLO11P08640 1367 aa7.96□□□□□ -1.13
CDC7YDL017W CIT1P00890 479 aa7.96□□□□□ -1.14
CDC7YDL017W STI1P15705 589 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
CDC7YDL017W SRP54P20424 541 aaKnown RBP7.96□□□□□ -1.14
CDC7YDL017W RPL8BP29453 256 aaKnown RBP7.96□□□□□ -1.14
CDC7YDL017W TOM71P38825 639 aaKnown RBP7.96□□□□□ -1.14
CDC7YDL017W LYS14P40971 790 aa7.96□□□□□ -1.14
CDC7YDL017W TCB2P48231 1178 aa7.96□□□□□ -1.14
CDC7YDL017W GIS4Q04233 774 aa7.96□□□□□ -1.14
CDC7YDL017W TMA16Q08687 178 aa7.96□□□□□ -1.14
CDC7YDL017W DSE3Q08729 430 aa7.96□□□□□ -1.14
CDC7YDL017W YOR296WQ08748 1289 aa7.96□□□□□ -1.14
CDC7YDL017W RRG1Q12167 365 aaPredicted RBP7.96□□□□□ -1.14
CDC7YDL017W CLF1Q12309 687 aaPredicted RBP7.96□□□□□ -1.14
CDC7YDL017W SAC6P32599 642 aaKnown RBP7.95□□□□□ -1.14
CDC7YDL017W MNR2P35724 969 aa7.95□□□□□ -1.14
CDC7YDL017W DAK2P43550 591 aa7.95□□□□□ -1.14
CDC7YDL017W RTC4P53850 401 aa7.95□□□□□ -1.14
CDC7YDL017W PCL8Q08966 492 aa7.95□□□□□ -1.14
CDC7YDL017W HIS4P00815 799 aaKnown RBP7.94□□□□□ -1.14
CDC7YDL017W MAK11P20484 414 aaKnown RBP7.94□□□□□ -1.14
CDC7YDL017W PRE8P23639 250 aa7.94□□□□□ -1.14
CDC7YDL017W MFT1P33441 392 aaKnown RBP7.94□□□□□ -1.14
CDC7YDL017W ADE17P38009 592 aaKnown RBP7.94□□□□□ -1.14
CDC7YDL017W FOL1P53848 824 aa7.94□□□□□ -1.14
CDC7YDL017W MDM1Q01846 1127 aa7.94□□□□□ -1.14
CDC7YDL017W SKG3Q06315 1026 aa7.94□□□□□ -1.14
CDC7YDL017W AFT2Q08957 416 aa7.94□□□□□ -1.14
CDC7YDL017W ACE2P21192 770 aa7.93□□□□□ -1.14
CDC7YDL017W SRM1P21827 482 aa7.93□□□□□ -1.14
CDC7YDL017W SPB4P25808 606 aaPredicted RBP7.93□□□□□ -1.14
CDC7YDL017W CDC15P27636 974 aa7.93□□□□□ -1.14
CDC7YDL017W HIR1P32479 840 aa7.93□□□□□ -1.14
CDC7YDL017W CAB3P36076 571 aa7.93□□□□□ -1.14
CDC7YDL017W SSP1P38871 571 aa7.93□□□□□ -1.14
CDC7YDL017W YJL171CP46992 396 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms