RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Tmco5bQ80X59 307 aa19.75■□□□□ 0.75
Sdc1-205ENSMUST00000171158 SkilQ60665 675 aa19.74■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Mdc1Q5PSV9 1707 aa19.74■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Tnpo1Q8BFY9 898 aaKnown RBP19.74■□□□□ 0.75
Sdc1-205ENSMUST00000171158 MvpQ9EQK5 861 aa19.73■□□□□ 0.75
Sdc1-205ENSMUST00000171158 ArxO35085 564 aa19.73■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Mcm10Q0VBD2 885 aa19.73■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Kif18aQ91WD7 886 aa19.73■□□□□ 0.75
Sdc1-205ENSMUST00000171158 4933416C03RikQ3V063 378 aa19.72■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Cabp2Q9JLK4 216 aa19.72■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Med1Q925J9 1575 aa19.72■□□□□ 0.75
Sdc1-205ENSMUST00000171158 N4bp2F8VQG7 1678 aaKnown RBP19.72■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Mfap1aC0HKD8 439 aaKnown RBP19.71■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Mfap1bC0HKD9 439 aaKnown RBP19.71■□□□□ 0.75
Sdc1-205ENSMUST00000171158 Sos1Q62245 1319 aa19.7■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Brd1E9PZ26 1189 aaKnown RBP19.7■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Kif20bQ80WE4 1774 aaKnown RBP19.7■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Ankrd44B2RXR6 993 aa19.7■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Adamtsl3G3UXC7 1706 aa19.7■□□□□ 0.74
Sdc1-205ENSMUST00000171158 PzpQ61838 1495 aa19.69■□□□□ 0.74
Sdc1-205ENSMUST00000171158 NalcnQ8BXR5 1738 aa19.69■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Cavin2Q63918 418 aaKnown RBP19.68■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Astn2Q80Z10 1352 aa19.68■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Pcdh10E9PXQ7 1057 aa19.68■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Wwc1Q5SXA9 1104 aa19.68■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Htatsf1Q8BGC0 757 aa19.68■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Kif2cQ922S8 721 aa19.67■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Usp16Q99LG0 825 aa19.67■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Eif4a2P10630 407 aa19.67■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Cog6Q8R3I3 657 aa19.67■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Sirt1Q923E4 737 aa19.67■□□□□ 0.74
Sdc1-205ENSMUST00000171158 HnrnpmQ9D0E1 729 aaKnown RBP19.67■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Chmp4bQ9D8B3 224 aaKnown RBP19.67■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Arap3Q8R5G7 1538 aa19.66■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Rreb1Q3UH06 1700 aaKnown RBP19.66■□□□□ 0.74
Sdc1-205ENSMUST00000171158 MarsQ68FL6 902 aaKnown RBP19.65■□□□□ 0.74
Sdc1-205ENSMUST00000171158 KnstrnQ9D9Z1 312 aaKnown RBP19.64■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Senp3Q9EP97 568 aaKnown RBP19.64■□□□□ 0.74
Sdc1-205ENSMUST00000171158 Stk31Q99MW1 1018 aa19.64■□□□□ 0.73
Sdc1-205ENSMUST00000171158 LifrP42703 1092 aa19.63■□□□□ 0.73
Sdc1-205ENSMUST00000171158 U2surpQ6NV83 1029 aaKnown RBP19.63■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Dnajc5gQ8C632 165 aa19.62■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Klhdc4Q921I2 584 aa19.62■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Znf335A2A5K6 1337 aa19.62■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Cetn4Q8K4K1 168 aa19.62■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Ubr1O70481 1757 aa19.61■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Tet3Q8BG87 1668 aa19.61■□□□□ 0.73
Sdc1-205ENSMUST00000171158 MpripP97434 1024 aa19.61■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Plin1Q8CGN5 517 aa19.61■□□□□ 0.73
Sdc1-205ENSMUST00000171158 CemipQ8BI06 1361 aa19.61■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Irx3P81067 507 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Aplp1Q03157 653 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Adgrb1Q3UHD1 1582 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Pik3c2aQ61194 1686 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Q3UJC8 639 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 D430041D05RikF6ZGR6 1678 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Kif24Q6NWW5 1356 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Map2P20357 1828 aa19.6■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Trim27Q62158 513 aa19.59■□□□□ 0.73
Sdc1-205ENSMUST00000171158 4930407I10RikD3Z5T8 1512 aa19.59■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Cdk12Q14AX6 1484 aaKnown RBP19.59■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Wdr63B2RY71 923 aa19.58■□□□□ 0.73
Sdc1-205ENSMUST00000171158 Ric3Q8BPM6 367 aa19.58■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Abcc10Q8R4P9 1501 aa19.58■□□□□ 0.72
Sdc1-205ENSMUST00000171158 CarsQ9ER72 831 aaKnown RBP19.57■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Mon2Q80TL7 1715 aa19.57■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Scn7aB1AYL1 1681 aa19.57■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Slit2Q9R1B9 1521 aa19.57■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Antxr1Q9CZ52 562 aa19.57■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Col16a1Q8BLX7 1580 aa19.56■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Parp14Q2EMV9 1817 aa19.56■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Catsper2A2ARP9 588 aa19.56■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Aldh1l2Q8K009 923 aa19.56■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Rims2Q9EQZ7 1530 aa19.55■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Terf2O35144 541 aa19.55■□□□□ 0.72
Sdc1-205ENSMUST00000171158 C5P06684 1680 aa19.54■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Gm10093D3YYI8 482 aa19.54■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Hdac1O09106 482 aaKnown RBP19.54■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Als2Q920R0 1651 aa19.54■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Chl1P70232 1209 aa19.53■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Camta1A2A891 1682 aa19.53■□□□□ 0.72
Sdc1-205ENSMUST00000171158 Gtf3c3Q3TMP1 882 aa19.52■□□□□ 0.72
Sdc1-205ENSMUST00000171158 PrkcshO08795 521 aa19.52■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Aifm3Q3TY86 605 aa19.52■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Tbc1d9Q3UYK3 1264 aa19.52■□□□□ 0.71
Sdc1-205ENSMUST00000171158 TmpoQ61033 693 aaKnown RBP19.52■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Cgnl1Q6AW69 1298 aa19.52■□□□□ 0.71
Sdc1-205ENSMUST00000171158 HnrnpuQ8VEK3 800 aaKnown RBP19.52■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Aldh8a1Q8BH00 487 aa19.51■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Rab11fip3Q8CHD8 1047 aa19.51■□□□□ 0.71
Sdc1-205ENSMUST00000171158 NgefQ8CHT1 710 aa19.51■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Ptpn23Q6PB44 1692 aa19.51■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Ncapd2Q8K2Z4 1392 aa19.51■□□□□ 0.71
Sdc1-205ENSMUST00000171158 PtprvP70289 1705 aa19.5■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Trpm3Q5F4S9 1721 aa19.5■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Tm6sf1P58749 370 aa19.5■□□□□ 0.71
Sdc1-205ENSMUST00000171158 FancaQ9JL70 1439 aa19.49■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Eif4g2Q62448 906 aaKnown RBP19.49■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Phf23Q8BSN5 401 aa19.49■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Nek4Q9Z1J2 792 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms