Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm25239-201ENSMUST00000174915 86 ntBASIC52.38■■■■■ 5.98
Ubr1O70481 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC48.66■■■■■ 5.38
Ubr1O70481 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC47.54■■■■■ 5.2
Ubr1O70481 Gm15042-201ENSMUST00000120212 883 ntBASIC45.68■■■■■ 4.9
Ubr1O70481 Gm24109-201ENSMUST00000175489 103 ntBASIC45.68■■■■■ 4.9
Ubr1O70481 Gm15045-201ENSMUST00000117359 883 ntBASIC44.92■■■■■ 4.78
Ubr1O70481 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC44.28■■■■■ 4.68
Ubr1O70481 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC44.22■■■■■ 4.67
Ubr1O70481 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC44.2■■■■■ 4.67
Ubr1O70481 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC43.74■■■■■ 4.59
Ubr1O70481 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC43.73■■■■■ 4.59
Ubr1O70481 Gm23366-201ENSMUST00000175022 89 ntBASIC43.62■■■■■ 4.57
Ubr1O70481 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC43.35■■■■■ 4.53
Ubr1O70481 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC42.66■■■■■ 4.42
Ubr1O70481 AC153911.1-202ENSMUST00000218534 1034 ntBASIC42.46■■■■■ 4.39
Ubr1O70481 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC42.44■■■■■ 4.38
Ubr1O70481 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC42.16■■■■■ 4.34
Ubr1O70481 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC41.97■■■■■ 4.31
Ubr1O70481 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41.92■■■■■ 4.3
Ubr1O70481 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC41.9■■■■■ 4.3
Ubr1O70481 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.88■■■■■ 4.29
Ubr1O70481 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41.87■■■■■ 4.29
Ubr1O70481 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC41.81■■■■■ 4.28
Ubr1O70481 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.66■■■■■ 4.26
Ubr1O70481 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC41.62■■■■■ 4.25
Ubr1O70481 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC41.5■■■■■ 4.23
Ubr1O70481 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC41.41■■■■■ 4.22
Ubr1O70481 Gm25238-201ENSMUST00000174914 89 ntBASIC41.38■■■■■ 4.22
Ubr1O70481 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC41.37■■■■■ 4.21
Ubr1O70481 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
Ubr1O70481 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
Ubr1O70481 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC41.27■■■■■ 4.2
Ubr1O70481 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC41.2■■■■■ 4.19
Ubr1O70481 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
Ubr1O70481 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC40.79■■■■■ 4.12
Ubr1O70481 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC40.67■■■■■ 4.1
Ubr1O70481 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC40.61■■■■■ 4.09
Ubr1O70481 Psd-208ENSMUST00000224556 2034 ntBASIC40.54■■■■■ 4.08
Ubr1O70481 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC40.36■■■■■ 4.05
Ubr1O70481 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC40.26■■■■■ 4.04
Ubr1O70481 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC40.26■■■■■ 4.04
Ubr1O70481 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
Ubr1O70481 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC40.01■■■■■ 4
Ubr1O70481 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC40■■■■□ 3.99
Ubr1O70481 Gm27325-201ENSMUST00000175467 74 ntBASIC39.97■■■■□ 3.99
Ubr1O70481 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Ubr1O70481 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC39.7■■■■□ 3.95
Ubr1O70481 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC39.67■■■■□ 3.94
Ubr1O70481 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC39.52■■■■□ 3.92
Ubr1O70481 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Ubr1O70481 Gm25262-201ENSMUST00000174934 133 ntBASIC39.46■■■■□ 3.91
Ubr1O70481 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
Ubr1O70481 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC39.37■■■■□ 3.89
Ubr1O70481 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Ubr1O70481 Rab21-202ENSMUST00000218831 843 ntBASIC39.28■■■■□ 3.88
Ubr1O70481 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.28■■■■□ 3.88
Ubr1O70481 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC39.23■■■■□ 3.87
Ubr1O70481 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
Ubr1O70481 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Ubr1O70481 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC39.1■■■■□ 3.85
Ubr1O70481 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC39.03■■■■□ 3.84
Ubr1O70481 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC39.01■■■■□ 3.84
Ubr1O70481 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC39■■■■□ 3.83
Ubr1O70481 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38.96■■■■□ 3.83
Ubr1O70481 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.94■■■■□ 3.82
Ubr1O70481 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Ubr1O70481 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
Ubr1O70481 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.9■■■■□ 3.82
Ubr1O70481 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Ubr1O70481 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
Ubr1O70481 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.82■■■■□ 3.8
Ubr1O70481 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC38.67■■■■□ 3.78
Ubr1O70481 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Ubr1O70481 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
Ubr1O70481 Gm26115-201ENSMUST00000175605 87 ntBASIC38.59■■■■□ 3.77
Ubr1O70481 Gm8109-201ENSMUST00000194076 746 ntBASIC38.59■■■■□ 3.77
Ubr1O70481 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
Ubr1O70481 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC38.52■■■■□ 3.76
Ubr1O70481 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
Ubr1O70481 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
Ubr1O70481 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Ubr1O70481 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC38.37■■■■□ 3.73
Ubr1O70481 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC38.35■■■■□ 3.73
Ubr1O70481 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC38.32■■■■□ 3.73
Ubr1O70481 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
Ubr1O70481 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.29■■■■□ 3.72
Ubr1O70481 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC38.28■■■■□ 3.72
Ubr1O70481 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Ubr1O70481 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
Ubr1O70481 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.21■■■■□ 3.71
Ubr1O70481 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC38.21■■■■□ 3.71
Ubr1O70481 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC38.17■■■■□ 3.7
Ubr1O70481 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Ubr1O70481 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
Ubr1O70481 Gm17082-201ENSMUST00000166043 1091 ntBASIC38.06■■■■□ 3.68
Ubr1O70481 Gm42596-201ENSMUST00000196305 1958 ntBASIC38.02■■■■□ 3.68
Ubr1O70481 Gm10524-201ENSMUST00000181931 1893 ntBASIC38■■■■□ 3.67
Ubr1O70481 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Ubr1O70481 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC37.98■■■■□ 3.67
Ubr1O70481 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms