RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	POL1	P13382	1468 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	UGA3	P26370	528 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	DAP1	Q12091	152 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
YPR158C-D	YPR158C-D	RRP15	Q06511	250 aa	Predicted RBP	4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	PIB1	Q06651	286 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	RPP0	P05317	312 aa	Known RBP	4.15	□□□□□ -1.74
YPR158C-D	YPR158C-D	PRP9	P19736	530 aa	Known RBP	4.15	□□□□□ -1.74
YPR158C-D	YPR158C-D	YGR117C	P53270	476 aa		4.15	□□□□□ -1.74
YPR158C-D	YPR158C-D	MRD1	Q06106	887 aa	Known RBP	4.15	□□□□□ -1.74
YPR158C-D	YPR158C-D	GAP1	P19145	602 aa	Predicted RBP	4.15	□□□□□ -1.74
YPR158C-D	YPR158C-D	PEX29	Q03370	554 aa		4.15	□□□□□ -1.74
YPR158C-D	YPR158C-D	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.75
YPR158C-D	YPR158C-D	RRP6	Q12149	733 aa	Known RBP	4.15	□□□□□ -1.75
YPR158C-D	YPR158C-D	POL3	P15436	1097 aa		4.15	□□□□□ -1.75
YPR158C-D	YPR158C-D	YER158C	P40095	573 aa		4.15	□□□□□ -1.75
YPR158C-D	YPR158C-D	MET13	P53128	600 aa		4.15	□□□□□ -1.75
YPR158C-D	YPR158C-D	YNR061C	P53747	219 aa		4.15	□□□□□ -1.75
YPR158C-D	YPR158C-D	ACA1	P39970	489 aa		4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	PRP42	Q03776	544 aa	Known RBP	4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	ECM30	Q06673	1274 aa		4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	AIR2	Q12476	344 aa	Known RBP	4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	SFB3	P38810	929 aa		4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	STM1	P39015	273 aa	Known RBP	4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	HOM2	P13663	365 aa	Known RBP	4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	GRS1	P38088	690 aa	Known RBP	4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	SLN1	P39928	1220 aa	Predicted RBP	4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	RPN3	P40016	523 aa	Known RBP	4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	PHM7	Q12252	991 aa		4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	BUD16	P39988	312 aa		4.14	□□□□□ -1.75
YPR158C-D	YPR158C-D	MPH3	P0CE00	602 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	STE4	P18851	423 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	RAD53	P22216	821 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	HCM1	P25364	564 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	MOB1	P40484	314 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	HRQ1	Q05549	1077 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	SEG2	P34250	1132 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	RVB2	Q12464	471 aa	Known RBP	4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	ARO1	P08566	1588 aa	Known RBP	4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	VPS35	P34110	944 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	PSP2	P50109	593 aa	Known RBP	4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	APL6	P46682	809 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	MDM1	Q01846	1127 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	HFI1	Q12060	488 aa		4.13	□□□□□ -1.75
YPR158C-D	YPR158C-D	RAD3	P06839	778 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	CSL4	P53859	292 aa	Predicted RBP	4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	YBT1	P32386	1661 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	GPB2	P39717	880 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	SHQ1	P40486	507 aa	Predicted RBP	4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	MSH4	P40965	878 aa	Predicted RBP	4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	YRR1	Q12172	810 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
YPR158C-D	YPR158C-D	YNL050C	P53952	270 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	VPS72	Q03388	795 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	YML083C	Q04526	418 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	CLF1	Q12309	687 aa	Predicted RBP	4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	BET2	P20133	325 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	VPS4	P52917	437 aa		4.12	□□□□□ -1.75
YPR158C-D	YPR158C-D	TFC4	P33339	1025 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	EUG1	P32474	517 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	TOS1	P38288	455 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	MDR1	P53258	950 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	GUT1	P32190	709 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	CST26	P38226	397 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	UBP12	P39538	1254 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	NPA3	P47122	385 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	SGM1	P47166	707 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	CWC21	Q03375	135 aa	Known RBP	4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	ESC2	Q06340	456 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	YHR131C	P38835	850 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	VPS45	P38932	577 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	YML020W	Q03722	664 aa		4.11	□□□□□ -1.75
YPR158C-D	YPR158C-D	SMY1	P32364	656 aa	Known RBP	4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	HEF3	P53978	1044 aa	Known RBP	4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	PPE1	P38796	400 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	ADY4	Q05955	493 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	SGF29	P25554	259 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	MCM4	P30665	933 aa	Known RBP	4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	PEX28	P38848	579 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	FAU1	P40099	211 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	SOL4	P53315	255 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	NUP145	P49687	1317 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	COY1	P34237	679 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	RRP14	P36080	434 aa	Known RBP	4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	YKR075C	P36155	307 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	IML2	P47031	731 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	GPR1	Q12361	961 aa		4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	MDM20	Q12387	796 aa	Known RBP	4.1	□□□□□ -1.75
YPR158C-D	YPR158C-D	PDC1	P06169	563 aa	Known RBP	4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	PCF11	P39081	626 aa	Predicted RBP	4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	YJR061W	P40355	935 aa		4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	FAF1	P40546	346 aa	Predicted RBP	4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	NSE1	Q07913	336 aa		4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	MRF1	P30775	413 aa	Predicted RBP	4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	YKL023W	P36103	277 aa	Known RBP	4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	HAL5	P38970	855 aa	Known RBP	4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	IRC4	Q03036	179 aa		4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	HIF1	Q12373	385 aa		4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	SEC14	P24280	304 aa	Known RBP	4.09	□□□□□ -1.75
YPR158C-D	YPR158C-D	YHL026C	P38740	315 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms