RNA–Protein interactions for RNA: YPL181W

CTI6, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene CTI6, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTI6YPL181W PMA1P05030 918 aaKnown RBP10.38□□□□□ -0.75
CTI6YPL181W GAL2P13181 574 aa10.38□□□□□ -0.75
CTI6YPL181W ETP1P38748 585 aaKnown RBP10.38□□□□□ -0.75
CTI6YPL181W RRT6P53117 311 aaPredicted RBP10.38□□□□□ -0.75
CTI6YPL181W KEL3Q08979 651 aaPredicted RBP10.38□□□□□ -0.75
CTI6YPL181W AAP1P37898 856 aaKnown RBP10.38□□□□□ -0.75
CTI6YPL181W MSH4P40965 878 aaPredicted RBP10.38□□□□□ -0.75
CTI6YPL181W PPM2Q08282 695 aa10.38□□□□□ -0.75
CTI6YPL181W COQ1P18900 473 aa10.37□□□□□ -0.75
CTI6YPL181W BRN1P38170 754 aa10.37□□□□□ -0.75
CTI6YPL181W YBL028CP38202 106 aa10.37□□□□□ -0.75
CTI6YPL181W YPL260WQ08977 551 aa10.37□□□□□ -0.75
CTI6YPL181W KIN1P13185 1064 aa10.36□□□□□ -0.75
CTI6YPL181W PFK2P16862 959 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
CTI6YPL181W PCS60P38137 543 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75 RIP-Chip
CTI6YPL181W TPS3P38426 1054 aaKnown RBP10.36□□□□□ -0.75
CTI6YPL181W FPR4Q06205 392 aaPredicted RBP10.36□□□□□ -0.75
CTI6YPL181W RPL17AP05740 184 aaKnown RBP10.35□□□□□ -0.75
CTI6YPL181W MET1P36150 593 aa10.35□□□□□ -0.75
CTI6YPL181W RPL17BP46990 184 aaKnown RBP10.35□□□□□ -0.75
CTI6YPL181W CHO2P05374 869 aaKnown RBP10.34□□□□□ -0.75
CTI6YPL181W HVG1P0CE11 249 aa10.34□□□□□ -0.75
CTI6YPL181W YHL050CP38721 697 aa10.34□□□□□ -0.75
CTI6YPL181W RTS1P38903 757 aa10.34□□□□□ -0.75
CTI6YPL181W SLN1P39928 1220 aaPredicted RBP10.34□□□□□ -0.75
CTI6YPL181W GCR2Q01722 534 aa10.34□□□□□ -0.75
CTI6YPL181W YDL124WQ07551 312 aaKnown RBP10.34□□□□□ -0.75
CTI6YPL181W TUB2P02557 457 aaKnown RBP10.33□□□□□ -0.76
CTI6YPL181W RRP8P38961 392 aaKnown RBP10.33□□□□□ -0.76
CTI6YPL181W BSD2P38356 321 aa10.33□□□□□ -0.76
CTI6YPL181W HXT17P53631 564 aa10.33□□□□□ -0.76
CTI6YPL181W MRD1Q06106 887 aaKnown RBP10.33□□□□□ -0.76
CTI6YPL181W GIN4Q12263 1142 aa10.33□□□□□ -0.76
CTI6YPL181W PRE8P23639 250 aa10.32□□□□□ -0.76
CTI6YPL181W SPT21P35209 758 aa10.32□□□□□ -0.76
CTI6YPL181W VID27P40157 782 aa10.32□□□□□ -0.76
CTI6YPL181W SNU71P53207 620 aaKnown RBP10.32□□□□□ -0.76
CTI6YPL181W PEX29Q03370 554 aa10.32□□□□□ -0.76
CTI6YPL181W HXT13P39924 564 aa10.31□□□□□ -0.76
CTI6YPL181W DUS1P53759 423 aaKnown RBP10.31□□□□□ -0.76
CTI6YPL181W RPS15Q01855 142 aaKnown RBP10.31□□□□□ -0.76
CTI6YPL181W SSF2Q12153 453 aaPredicted RBP10.31□□□□□ -0.76
CTI6YPL181W RAD61Q99359 647 aa10.31□□□□□ -0.76
CTI6YPL181W MPH3P0CE00 602 aa10.3□□□□□ -0.76
CTI6YPL181W SRM1P21827 482 aa10.3□□□□□ -0.76
CTI6YPL181W DLD1P32891 587 aa10.3□□□□□ -0.76
CTI6YPL181W SKI2P35207 1287 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
CTI6YPL181W CST26P38226 397 aa10.3□□□□□ -0.76
CTI6YPL181W UFD2P54860 961 aa10.3□□□□□ -0.76
CTI6YPL181W ACA1P39970 489 aa10.29□□□□□ -0.76
CTI6YPL181W CST9Q06032 482 aa10.29□□□□□ -0.76
CTI6YPL181W SKG3Q06315 1026 aa10.28□□□□□ -0.76
CTI6YPL181W LAP2Q10740 671 aa10.28□□□□□ -0.76
CTI6YPL181W TIF6Q12522 245 aaKnown RBP10.28□□□□□ -0.76
CTI6YPL181W CRG1P38892 291 aaRIP-Chip data10.28□□□□□ -0.76not detected
CTI6YPL181W RBA50Q04418 439 aa10.28□□□□□ -0.76
CTI6YPL181W SPN1Q06505 410 aaPredicted RBP10.28□□□□□ -0.76
CTI6YPL181W TPM1P17536 199 aaKnown RBP10.27□□□□□ -0.77
CTI6YPL181W RPC31P17890 251 aa10.27□□□□□ -0.77
CTI6YPL181W PRO3P32263 286 aaKnown RBP10.27□□□□□ -0.77
CTI6YPL181W MYO3P36006 1272 aa10.27□□□□□ -0.77
CTI6YPL181W APE3P37302 537 aaKnown RBP10.27□□□□□ -0.77
CTI6YPL181W KRS1P15180 591 aaKnown RBP10.26□□□□□ -0.77
CTI6YPL181W CHS3P29465 1165 aa10.26□□□□□ -0.77
CTI6YPL181W RER2P35196 286 aa10.26□□□□□ -0.77
CTI6YPL181W OCT1P35999 772 aa10.26□□□□□ -0.77
CTI6YPL181W CIC1P38779 376 aaKnown RBP10.26□□□□□ -0.77
CTI6YPL181W VPS8P39702 1274 aa10.26□□□□□ -0.77
CTI6YPL181W HDA1P53973 706 aa10.26□□□□□ -0.77
CTI6YPL181W PGA3Q12746 312 aaKnown RBP10.26□□□□□ -0.77
CTI6YPL181W IMP2'P32351 346 aa10.25□□□□□ -0.77
CTI6YPL181W ANP1P32629 500 aa10.25□□□□□ -0.77
CTI6YPL181W MOT2P34909 587 aaKnown RBP10.25□□□□□ -0.77
CTI6YPL181W TIF4631P39935 952 aaKnown RBP10.25□□□□□ -0.77
CTI6YPL181W FBP1P09201 348 aa10.24□□□□□ -0.77
CTI6YPL181W ACE2P21192 770 aa10.24□□□□□ -0.77
CTI6YPL181W RIT1P23796 513 aa10.24□□□□□ -0.77
CTI6YPL181W PTK2P47116 818 aaKnown RBP10.24□□□□□ -0.77
CTI6YPL181W SUB2Q07478 446 aaKnown RBP10.24□□□□□ -0.77
CTI6YPL181W YDJ1P25491 409 aaKnown RBP10.23□□□□□ -0.77
CTI6YPL181W PEP3P27801 918 aa10.23□□□□□ -0.77
CTI6YPL181W RSC30P38781 883 aa10.23□□□□□ -0.77
CTI6YPL181W JIP4Q03361 876 aa10.23□□□□□ -0.77
CTI6YPL181W TUS1Q06412 1307 aa10.23□□□□□ -0.77
CTI6YPL181W ERG12P07277 443 aa10.23□□□□□ -0.77
CTI6YPL181W ASH1P34233 588 aa10.23□□□□□ -0.77
CTI6YPL181W SRF1Q12516 437 aa10.23□□□□□ -0.77
CTI6YPL181W LYS14P40971 790 aa10.22□□□□□ -0.77
CTI6YPL181W NET1P47035 1189 aa10.22□□□□□ -0.77
CTI6YPL181W YJL007CP47080 104 aa10.22□□□□□ -0.77
CTI6YPL181W TRL1P09880 827 aaKnown RBP10.21□□□□□ -0.78
CTI6YPL181W SAM2P19358 384 aaKnown RBP10.21□□□□□ -0.78
CTI6YPL181W VAB2P40003 282 aa10.21□□□□□ -0.78
CTI6YPL181W AIM9P40053 627 aaKnown RBP10.21□□□□□ -0.78
CTI6YPL181W ESF1Q06344 628 aaKnown RBP10.21□□□□□ -0.78
CTI6YPL181W MAK31P23059 88 aa10.2□□□□□ -0.78
CTI6YPL181W SPB4P25808 606 aaPredicted RBP10.2□□□□□ -0.78
CTI6YPL181W RPT6Q01939 405 aaKnown RBP10.2□□□□□ -0.78
CTI6YPL181W EST2Q06163 884 aa10.2□□□□□ -0.78
CTI6YPL181W TFC6Q06339 672 aa10.2□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms