RNA–Protein interactions for RNA: YOR127W

RGA1, Transcript of GTPase-activating protein for polarity-establishment protein Cdc42p, yeastyeast

Gene RGA1, Length 3,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGA1YOR127W SPS1P08458 490 aa2.47□□□□□ -2.01
RGA1YOR127W SRP40P32583 406 aaPredicted RBP2.47□□□□□ -2.01
RGA1YOR127W YKL091CP33324 310 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W YAP1801P38856 637 aa2.47□□□□□ -2.01
RGA1YOR127W HOS2P53096 452 aaPredicted RBP2.47□□□□□ -2.01
RGA1YOR127W ERO1Q03103 563 aa2.47□□□□□ -2.01
RGA1YOR127W YLR346CQ06139 101 aa2.47□□□□□ -2.01
RGA1YOR127W YLL054CQ12244 843 aa2.47□□□□□ -2.01
RGA1YOR127W CEX1Q12453 761 aa2.47□□□□□ -2.01
RGA1YOR127W VMR1P38735 1592 aa2.47□□□□□ -2.01
RGA1YOR127W SSA4P22202 642 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W UGA3P26370 528 aa2.47□□□□□ -2.01
RGA1YOR127W CDC60P26637 1090 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W PAC1P39946 494 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W MXR1P40029 184 aa2.47□□□□□ -2.01
RGA1YOR127W MEP1P40260 492 aa2.47□□□□□ -2.01
RGA1YOR127W GPI8P49018 411 aa2.47□□□□□ -2.01
RGA1YOR127W DNM1P54861 757 aa2.47□□□□□ -2.01
RGA1YOR127W CTF4Q01454 927 aa2.47□□□□□ -2.01
RGA1YOR127W VTI1Q04338 217 aa2.47□□□□□ -2.01
RGA1YOR127W TAP42Q04372 366 aa2.47□□□□□ -2.01
RGA1YOR127W NSE3Q05541 303 aa2.47□□□□□ -2.01
RGA1YOR127W JIP5Q06214 492 aaPredicted RBP2.47□□□□□ -2.01
RGA1YOR127W IMH1Q06704 911 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W MCM1P11746 286 aa2.47□□□□□ -2.01
RGA1YOR127W SEC2P17065 759 aa2.47□□□□□ -2.01
RGA1YOR127W RPB4P20433 221 aaPredicted RBP2.47□□□□□ -2.01
RGA1YOR127W VMA4P22203 233 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W DPB3P27344 201 aa2.47□□□□□ -2.01
RGA1YOR127W TPD3P31383 635 aa2.47□□□□□ -2.01
RGA1YOR127W KDX1P36005 433 aa2.47□□□□□ -2.01
RGA1YOR127W PIM1P36775 1133 aa2.47□□□□□ -2.01
RGA1YOR127W RGA1P39083 1007 aa2.47□□□□□ -2.01
RGA1YOR127W BOI2P39969 1040 aa2.47□□□□□ -2.01
RGA1YOR127W SET2P46995 733 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W TUB4P53378 473 aa2.47□□□□□ -2.01
RGA1YOR127W CEF1Q03654 590 aaPredicted RBP2.47□□□□□ -2.01
RGA1YOR127W ERV41Q04651 352 aa2.47□□□□□ -2.01
RGA1YOR127W ALR1Q08269 859 aa2.47□□□□□ -2.01
RGA1YOR127W ETT1Q08421 412 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W YOR389WQ08912 624 aa2.47□□□□□ -2.01
RGA1YOR127W NOP58Q12499 511 aaKnown RBP2.47□□□□□ -2.01
RGA1YOR127W YGR161W-CQ3E744 92 aa2.47□□□□□ -2.01
RGA1YOR127W SWI6P09959 803 aa2.46□□□□□ -2.02
RGA1YOR127W HEM3P28789 327 aa2.46□□□□□ -2.02
RGA1YOR127W CDC3P32457 520 aaKnown RBP2.46□□□□□ -2.02
RGA1YOR127W EFB1P32471 206 aaKnown RBP2.46□□□□□ -2.02
RGA1YOR127W UBP12P39538 1254 aa2.46□□□□□ -2.02
RGA1YOR127W POB3Q04636 552 aaKnown RBP2.46□□□□□ -2.02
RGA1YOR127W SVF1Q05515 481 aa2.46□□□□□ -2.02
RGA1YOR127W SUB2Q07478 446 aaKnown RBP2.46□□□□□ -2.02
RGA1YOR127W NUP188P52593 1655 aaKnown RBP2.46□□□□□ -2.02
RGA1YOR127W TSC11P40061 1430 aa2.46□□□□□ -2.02
RGA1YOR127W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
RGA1YOR127W RPC37P36121 282 aa2.46□□□□□ -2.02
RGA1YOR127W AIM20P40451 204 aa2.46□□□□□ -2.02
RGA1YOR127W SDS3P40505 327 aa2.46□□□□□ -2.02
RGA1YOR127W RSC8P43609 557 aaKnown RBP2.46□□□□□ -2.02
RGA1YOR127W NNF2P53253 936 aa2.46□□□□□ -2.02
RGA1YOR127W GRX3Q03835 250 aa2.46□□□□□ -2.02
RGA1YOR127W YDR444WQ04093 687 aa2.46□□□□□ -2.02
RGA1YOR127W RSC2Q06488 889 aa2.46□□□□□ -2.02
RGA1YOR127W SNU66Q12420 587 aaPredicted RBP2.46□□□□□ -2.02
RGA1YOR127W STH1P32597 1359 aa2.45□□□□□ -2.02
RGA1YOR127W PDR10P51533 1564 aa2.45□□□□□ -2.02
RGA1YOR127W HMG1P12683 1054 aa2.45□□□□□ -2.02
RGA1YOR127W TRX2P22803 104 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W RTG2P32608 588 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W IXR1P33417 597 aa2.45□□□□□ -2.02
RGA1YOR127W DSF2P38213 736 aa2.45□□□□□ -2.02
RGA1YOR127W SIC1P38634 284 aa2.45□□□□□ -2.02
RGA1YOR127W DOT6P40059 670 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W LEM3P42838 414 aa2.45□□□□□ -2.02
RGA1YOR127W YPL062WQ02781 134 aa2.45□□□□□ -2.02
RGA1YOR127W PNG1Q02890 363 aa2.45□□□□□ -2.02
RGA1YOR127W MTC5Q03897 1148 aa2.45□□□□□ -2.02
RGA1YOR127W NOP14Q99207 810 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W VTH1P40438 1549 aa2.45□□□□□ -2.02
RGA1YOR127W VTH2P40890 1549 aa2.45□□□□□ -2.02
RGA1YOR127W RPC82P32349 654 aa2.45□□□□□ -2.02
RGA1YOR127W MSH4P40965 878 aaPredicted RBP2.45□□□□□ -2.02
RGA1YOR127W PRP3Q03338 469 aaPredicted RBP2.45□□□□□ -2.02
RGA1YOR127W SXM1Q04175 944 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W COG8Q04632 607 aa2.45□□□□□ -2.02
RGA1YOR127W RTC5Q12108 567 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W LSP1Q12230 341 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W IQG1Q12280 1495 aa2.45□□□□□ -2.02
RGA1YOR127W SPP41P38904 1435 aa2.45□□□□□ -2.02
RGA1YOR127W SWI1P09547 1314 aa2.45□□□□□ -2.02
RGA1YOR127W SNQ2P32568 1501 aaKnown RBP2.45□□□□□ -2.02
RGA1YOR127W THR4P16120 514 aaKnown RBP2.44□□□□□ -2.02
RGA1YOR127W PWP2P25635 923 aaKnown RBP2.44□□□□□ -2.02
RGA1YOR127W TBS1P38114 1094 aa2.44□□□□□ -2.02
RGA1YOR127W SEC9P40357 651 aa2.44□□□□□ -2.02
RGA1YOR127W ATP22P50273 684 aaPredicted RBP2.44□□□□□ -2.02
RGA1YOR127W UTP22P53254 1237 aaPredicted RBP2.44□□□□□ -2.02
RGA1YOR127W PUS6P53294 404 aa2.44□□□□□ -2.02
RGA1YOR127W NFI1Q12216 726 aa2.44□□□□□ -2.02
RGA1YOR127W MET22P32179 357 aa2.44□□□□□ -2.02
RGA1YOR127W GLC3P32775 704 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms