RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C PET100P38958 111 aa6.18□□□□□ -1.42
VBA1YMR088C NDC80P40460 691 aa6.18□□□□□ -1.42
VBA1YMR088C TBF1Q02457 562 aa6.18□□□□□ -1.42
VBA1YMR088C DBP10Q12389 995 aaKnown RBP6.18□□□□□ -1.42
VBA1YMR088C KAR1P11927 433 aa6.17□□□□□ -1.42
VBA1YMR088C SUP45P12385 437 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C CLB1P24868 471 aa6.17□□□□□ -1.42
VBA1YMR088C UGA3P26370 528 aa6.17□□□□□ -1.42
VBA1YMR088C BUD14P27637 709 aa6.17□□□□□ -1.42
VBA1YMR088C RTG2P32608 588 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C TFC3P34111 1160 aa6.17□□□□□ -1.42
VBA1YMR088C YPP1P46951 817 aa6.17□□□□□ -1.42
VBA1YMR088C SHE4P51534 789 aa6.17□□□□□ -1.42
VBA1YMR088C RSC1P53236 928 aa6.17□□□□□ -1.42
VBA1YMR088C TUB4P53378 473 aa6.17□□□□□ -1.42
VBA1YMR088C YOL057WQ08225 711 aa6.17□□□□□ -1.42
VBA1YMR088C SLX4Q12098 748 aa6.17□□□□□ -1.42
VBA1YMR088C APN1P22936 367 aa6.17□□□□□ -1.42
VBA1YMR088C ROX1P25042 368 aa6.17□□□□□ -1.42
VBA1YMR088C PHO84P25297 587 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C YDJ1P25491 409 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C SMY1P32364 656 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C RPN12P32496 274 aa6.17□□□□□ -1.42
VBA1YMR088C RRN6P32786 894 aa6.17□□□□□ -1.42
VBA1YMR088C SWH1P35845 1188 aa6.17□□□□□ -1.42
VBA1YMR088C ESL2P36168 1195 aa6.17□□□□□ -1.42
VBA1YMR088C SEC26P41810 973 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C RNT1Q02555 471 aa6.17□□□□□ -1.42
VBA1YMR088C SPO71Q03868 1245 aa6.17□□□□□ -1.42
VBA1YMR088C VTI1Q04338 217 aa6.17□□□□□ -1.42
VBA1YMR088C YML082WQ04533 649 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C SMD2Q06217 110 aaKnown RBP6.17□□□□□ -1.42
VBA1YMR088C PMT7Q06644 662 aa6.17□□□□□ -1.42
VBA1YMR088C RPC31P17890 251 aa6.16□□□□□ -1.42
VBA1YMR088C NUF2P33895 451 aa6.16□□□□□ -1.42
VBA1YMR088C TOM71P38825 639 aaKnown RBP6.16□□□□□ -1.42
VBA1YMR088C ARB1P40024 610 aaKnown RBP6.16□□□□□ -1.42
VBA1YMR088C UTP18P40362 594 aaPredicted RBP6.16□□□□□ -1.42
VBA1YMR088C SPO19Q03029 223 aa6.16□□□□□ -1.42
VBA1YMR088C YPR204WQ08995 1032 aa6.16□□□□□ -1.42
VBA1YMR088C SLP1Q12232 587 aa6.16□□□□□ -1.42
VBA1YMR088C SPA2P23201 1466 aaKnown RBP6.15□□□□□ -1.42
VBA1YMR088C ACP1P32463 125 aa6.15□□□□□ -1.42
VBA1YMR088C ATG19P35193 415 aa6.15□□□□□ -1.42
VBA1YMR088C ATG14P38270 344 aa6.15□□□□□ -1.42
VBA1YMR088C SIT1P39980 628 aa6.15□□□□□ -1.42
VBA1YMR088C MAM1P40065 302 aa6.15□□□□□ -1.42
VBA1YMR088C YNL050CP53952 270 aa6.15□□□□□ -1.42
VBA1YMR088C PNG1Q02890 363 aa6.15□□□□□ -1.42
VBA1YMR088C ERB1Q04660 807 aaKnown RBP6.15□□□□□ -1.42
VBA1YMR088C NOC3Q07896 663 aaPredicted RBP6.15□□□□□ -1.42
VBA1YMR088C YDL206WQ12424 762 aa6.15□□□□□ -1.42
VBA1YMR088C PRT1P06103 763 aaKnown RBP6.14□□□□□ -1.43
VBA1YMR088C RPB4P20433 221 aaPredicted RBP6.14□□□□□ -1.43
VBA1YMR088C CHL1P22516 861 aaPredicted RBP6.14□□□□□ -1.43
VBA1YMR088C TSR4P25040 408 aa6.14□□□□□ -1.43
VBA1YMR088C PEP12P32854 288 aa6.14□□□□□ -1.43
VBA1YMR088C MEF2P39677 819 aa6.14□□□□□ -1.43
VBA1YMR088C APL6P46682 809 aa6.14□□□□□ -1.43
VBA1YMR088C RAD17P48581 401 aa6.14□□□□□ -1.43
VBA1YMR088C ADE12P80210 433 aaKnown RBP6.14□□□□□ -1.43
VBA1YMR088C TAP42Q04372 366 aa6.14□□□□□ -1.43
VBA1YMR088C PEX19Q07418 342 aa6.14□□□□□ -1.43
VBA1YMR088C SEC39Q12745 709 aa6.14□□□□□ -1.43
VBA1YMR088C ENO2P00925 437 aaKnown RBP6.14□□□□□ -1.43
VBA1YMR088C PUF4P25339 888 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
VBA1YMR088C ANP1P32629 500 aa6.14□□□□□ -1.43
VBA1YMR088C DLD1P32891 587 aa6.14□□□□□ -1.43
VBA1YMR088C VPS41P38959 992 aa6.14□□□□□ -1.43
VBA1YMR088C ENP2P48234 707 aaKnown RBP6.14□□□□□ -1.43
VBA1YMR088C SNZ1Q03148 297 aa6.14□□□□□ -1.43
VBA1YMR088C MSH6Q03834 1242 aa6.14□□□□□ -1.43
VBA1YMR088C NSE3Q05541 303 aa6.14□□□□□ -1.43
VBA1YMR088C RAD50P12753 1312 aa6.13□□□□□ -1.43
VBA1YMR088C SSK22P25390 1331 aaPredicted RBP6.13□□□□□ -1.43
VBA1YMR088C PET494P07390 489 aaPredicted RBP6.13□□□□□ -1.43
VBA1YMR088C SSB1P11484 613 aaKnown RBP6.13□□□□□ -1.43
VBA1YMR088C MER1P16523 270 aa6.13□□□□□ -1.43
VBA1YMR088C PET123P17558 318 aa6.13□□□□□ -1.43
VBA1YMR088C CDC3P32457 520 aaKnown RBP6.13□□□□□ -1.43
VBA1YMR088C MRE11P32829 692 aa6.13□□□□□ -1.43
VBA1YMR088C YEL1P34225 687 aa6.13□□□□□ -1.43
VBA1YMR088C UBP13P38187 747 aa6.13□□□□□ -1.43
VBA1YMR088C RKM3P38222 552 aa6.13□□□□□ -1.43
VBA1YMR088C SHC1P39000 512 aa6.13□□□□□ -1.43
VBA1YMR088C SLN1P39928 1220 aaPredicted RBP6.13□□□□□ -1.43
VBA1YMR088C SSB2P40150 613 aaKnown RBP6.13□□□□□ -1.43
VBA1YMR088C IRR1P40541 1150 aa6.13□□□□□ -1.43
VBA1YMR088C SUM1P46676 1062 aa6.13□□□□□ -1.43
VBA1YMR088C MSN5P52918 1224 aa6.13□□□□□ -1.43
VBA1YMR088C HOP2P53187 214 aa6.13□□□□□ -1.43
VBA1YMR088C NAF1P53919 492 aaKnown RBP6.13□□□□□ -1.43
VBA1YMR088C SUB2Q07478 446 aaKnown RBP6.13□□□□□ -1.43
VBA1YMR088C PDI1P17967 522 aaKnown RBP6.12□□□□□ -1.43
VBA1YMR088C MRPL25P23369 157 aa6.12□□□□□ -1.43
VBA1YMR088C PAC1P39946 494 aaKnown RBP6.12□□□□□ -1.43
VBA1YMR088C LAM5P43560 674 aa6.12□□□□□ -1.43
VBA1YMR088C RPA14P50106 137 aa6.12□□□□□ -1.43
VBA1YMR088C IST1P53843 298 aaPredicted RBP6.12□□□□□ -1.43
VBA1YMR088C VPS60Q03390 229 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms