RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C TUM1Q08686 304 aaKnown RBP9.83□□□□□ -0.84
SSL2YIL143C SNU66Q12420 587 aaPredicted RBP9.83□□□□□ -0.84
SSL2YIL143C LAM4P38800 1345 aa9.82□□□□□ -0.84
SSL2YIL143C HXK1P04806 485 aaKnown RBP9.82□□□□□ -0.84
SSL2YIL143C PGI1P12709 554 aaKnown RBP9.82□□□□□ -0.84
SSL2YIL143C HCA4P20448 770 aaKnown RBP9.82□□□□□ -0.84
SSL2YIL143C VPS75P53853 264 aa9.82□□□□□ -0.84
SSL2YIL143C DCD1P06773 312 aa9.82□□□□□ -0.84
SSL2YIL143C SPC110P32380 944 aa9.82□□□□□ -0.84
SSL2YIL143C NUG1P40010 520 aaKnown RBP9.82□□□□□ -0.84
SSL2YIL143C MTC5Q03897 1148 aa9.82□□□□□ -0.84
SSL2YIL143C SUP35P05453 685 aaKnown RBP9.81□□□□□ -0.84
SSL2YIL143C APT1P49435 187 aaKnown RBP9.81□□□□□ -0.84
SSL2YIL143C MCM16Q12262 181 aa9.81□□□□□ -0.84
SSL2YIL143C PDC1P06169 563 aaKnown RBP9.81□□□□□ -0.84
SSL2YIL143C DIT2P21595 489 aa9.81□□□□□ -0.84
SSL2YIL143C GDT1P38301 280 aaPredicted RBP9.81□□□□□ -0.84
SSL2YIL143C YGL140CP53120 1219 aa9.81□□□□□ -0.84
SSL2YIL143C MRS2Q01926 470 aa9.81□□□□□ -0.84
SSL2YIL143C RTT107P38850 1070 aa9.8□□□□□ -0.84
SSL2YIL143C VPS41P38959 992 aa9.8□□□□□ -0.84
SSL2YIL143C UBP10P53874 792 aaPredicted RBP9.8□□□□□ -0.84
SSL2YIL143C PKH3Q03306 898 aaPredicted RBP9.8□□□□□ -0.84
SSL2YIL143C RBA50Q04418 439 aa9.8□□□□□ -0.84
SSL2YIL143C SML1Q04964 104 aa9.8□□□□□ -0.84
SSL2YIL143C RNT1Q02555 471 aa9.79□□□□□ -0.84
SSL2YIL143C UBC1P21734 215 aaKnown RBP9.79□□□□□ -0.84
SSL2YIL143C MGA2P40578 1113 aa9.79□□□□□ -0.84
SSL2YIL143C ALD3P54114 506 aa9.79□□□□□ -0.84
SSL2YIL143C FAS2P19097 1887 aaKnown RBP9.78□□□□□ -0.84
SSL2YIL143C PFK2P16862 959 aaKnown RBP RIP-Chip data9.78□□□□□ -0.84not detected
SSL2YIL143C SAC6P32599 642 aaKnown RBP9.78□□□□□ -0.84
SSL2YIL143C SKI2P35207 1287 aaKnown RBP RIP-Chip data9.78□□□□□ -0.84not detected
SSL2YIL143C YKL133CP36066 463 aa9.78□□□□□ -0.84
SSL2YIL143C REI1P38344 393 aaPredicted RBP9.78□□□□□ -0.84
SSL2YIL143C GYL1Q04322 720 aa9.78□□□□□ -0.84
SSL2YIL143C RRI2Q12348 645 aa9.78□□□□□ -0.84
SSL2YIL143C PTP3P40048 928 aa9.78□□□□□ -0.84
SSL2YIL143C AFT2Q08957 416 aa9.78□□□□□ -0.84
SSL2YIL143C MSH3P25336 1018 aa9.77□□□□□ -0.85
SSL2YIL143C MSH1P25846 959 aa9.77□□□□□ -0.85
SSL2YIL143C RPN10P38886 268 aaKnown RBP9.77□□□□□ -0.85
SSL2YIL143C CAJ1P39101 391 aa9.77□□□□□ -0.85
SSL2YIL143C IES2P40154 320 aa9.77□□□□□ -0.85
SSL2YIL143C SEC9P40357 651 aa9.77□□□□□ -0.85
SSL2YIL143C CAF130P53280 1122 aaPredicted RBP9.77□□□□□ -0.85
SSL2YIL143C ECM1P39715 212 aa9.77□□□□□ -0.85
SSL2YIL143C YMR102CQ03177 834 aa9.77□□□□□ -0.85
SSL2YIL143C YOL098CQ12496 1037 aa9.77□□□□□ -0.85
SSL2YIL143C PHO13P19881 312 aa9.76□□□□□ -0.85
SSL2YIL143C MET1P36150 593 aa9.76□□□□□ -0.85
SSL2YIL143C MVP1P40959 511 aaKnown RBP9.76□□□□□ -0.85
SSL2YIL143C HCR1Q05775 265 aaKnown RBP9.76□□□□□ -0.85
SSL2YIL143C DCS2Q12123 353 aa9.76□□□□□ -0.85
SSL2YIL143C STE11P23561 717 aa9.76□□□□□ -0.85
SSL2YIL143C STO1P34160 861 aaKnown RBP9.76□□□□□ -0.85
SSL2YIL143C MED8P38304 223 aa9.76□□□□□ -0.85
SSL2YIL143C AKR1P39010 764 aa9.76□□□□□ -0.85
SSL2YIL143C SAP1P39955 897 aaKnown RBP9.76□□□□□ -0.85
SSL2YIL143C EST2Q06163 884 aa9.76□□□□□ -0.85
SSL2YIL143C SSF2Q12153 453 aaPredicted RBP9.76□□□□□ -0.85
SSL2YIL143C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
SSL2YIL143C URA1P28272 314 aaPredicted RBP9.75□□□□□ -0.85
SSL2YIL143C ADE17P38009 592 aaKnown RBP9.75□□□□□ -0.85
SSL2YIL143C NDC80P40460 691 aa9.75□□□□□ -0.85
SSL2YIL143C GFD1Q04839 188 aaKnown RBP9.75□□□□□ -0.85
SSL2YIL143C TAH18Q12181 623 aa9.75□□□□□ -0.85
SSL2YIL143C RIM15P43565 1770 aa9.74□□□□□ -0.85
SSL2YIL143C SEC65P29478 273 aa9.74□□□□□ -0.85
SSL2YIL143C RER2P35196 286 aa9.74□□□□□ -0.85
SSL2YIL143C CDC6P09119 513 aa9.74□□□□□ -0.85
SSL2YIL143C VPS38Q05919 439 aa9.74□□□□□ -0.85
SSL2YIL143C SPN1Q06505 410 aaPredicted RBP9.74□□□□□ -0.85
SSL2YIL143C VPS1P21576 704 aaKnown RBP9.73□□□□□ -0.85
SSL2YIL143C DSN1P40568 576 aa9.73□□□□□ -0.85
SSL2YIL143C PHM7Q12252 991 aa9.73□□□□□ -0.85
SSL2YIL143C MPH3P0CE00 602 aa9.73□□□□□ -0.85
SSL2YIL143C CBP3P21560 335 aa9.73□□□□□ -0.85
SSL2YIL143C CRG1P38892 291 aaRIP-Chip data9.73□□□□□ -0.85not detected
SSL2YIL143C SPT8P38915 602 aa9.73□□□□□ -0.85
SSL2YIL143C DPB3P27344 201 aa9.72□□□□□ -0.85
SSL2YIL143C SAP190P36123 1033 aa9.72□□□□□ -0.85
SSL2YIL143C CCT4P39078 528 aaKnown RBP9.72□□□□□ -0.85
SSL2YIL143C ENP2P48234 707 aaKnown RBP9.72□□□□□ -0.85
SSL2YIL143C PPM2Q08282 695 aa9.72□□□□□ -0.85
SSL2YIL143C ATG9Q12142 997 aa9.72□□□□□ -0.85
SSL2YIL143C YOL087CQ99247 1116 aa9.72□□□□□ -0.85
SSL2YIL143C SER1P33330 395 aaKnown RBP9.72□□□□□ -0.85
SSL2YIL143C HAL5P38970 855 aaKnown RBP9.72□□□□□ -0.85
SSL2YIL143C KAR5Q04746 504 aa9.72□□□□□ -0.85
SSL2YIL143C RNA1P11745 407 aaKnown RBP9.71□□□□□ -0.85
SSL2YIL143C CSC1Q06538 782 aa9.71□□□□□ -0.85
SSL2YIL143C SWI4P25302 1093 aaKnown RBP9.71□□□□□ -0.86
SSL2YIL143C SLD2P34252 453 aa9.71□□□□□ -0.86
SSL2YIL143C PXL1P36166 706 aa9.71□□□□□ -0.86
SSL2YIL143C SHM1P37292 490 aaPredicted RBP9.71□□□□□ -0.86
SSL2YIL143C RGD1P38339 666 aa9.71□□□□□ -0.86
SSL2YIL143C CUE3P53137 624 aaKnown RBP9.71□□□□□ -0.86
SSL2YIL143C ALF1P53904 254 aa9.71□□□□□ -0.86
SSL2YIL143C ATG23Q06671 453 aa9.71□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms