RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W ATG20Q07528 640 aa9.13□□□□□ -0.95
SHC1YER096W SSF2Q12153 453 aaPredicted RBP9.13□□□□□ -0.95
SHC1YER096W TIF4632P39936 914 aaKnown RBP9.12□□□□□ -0.95
SHC1YER096W UTP7P40055 554 aaKnown RBP9.12□□□□□ -0.95
SHC1YER096W APL6P46682 809 aa9.12□□□□□ -0.95
SHC1YER096W CTF18P49956 741 aa9.12□□□□□ -0.95
SHC1YER096W PUS6P53294 404 aa9.12□□□□□ -0.95
SHC1YER096W LSP1Q12230 341 aaKnown RBP9.12□□□□□ -0.95
SHC1YER096W RER2P35196 286 aa9.11□□□□□ -0.95
SHC1YER096W CRG1P38892 291 aaRIP-Chip data9.11□□□□□ -0.95not detected
SHC1YER096W VPS4P52917 437 aa9.11□□□□□ -0.95
SHC1YER096W PIP2P52960 996 aa9.11□□□□□ -0.95
SHC1YER096W UFD2P54860 961 aa9.11□□□□□ -0.95
SHC1YER096W RPS15Q01855 142 aaKnown RBP9.11□□□□□ -0.95
SHC1YER096W TPM1P17536 199 aaKnown RBP9.1□□□□□ -0.95
SHC1YER096W PRO3P32263 286 aaKnown RBP9.1□□□□□ -0.95
SHC1YER096W FBP26P32604 452 aa9.1□□□□□ -0.95
SHC1YER096W YJL171CP46992 396 aa9.1□□□□□ -0.95
SHC1YER096W SPN1Q06505 410 aaPredicted RBP9.1□□□□□ -0.95
SHC1YER096W MYO3P36006 1272 aa9.1□□□□□ -0.95
SHC1YER096W RRP8P38961 392 aaKnown RBP9.1□□□□□ -0.95
SHC1YER096W ENT3P47160 408 aa9.1□□□□□ -0.95
SHC1YER096W MTC3P53077 123 aa9.1□□□□□ -0.95
SHC1YER096W YGL081WP53156 320 aa9.1□□□□□ -0.95
SHC1YER096W HRQ1Q05549 1077 aa9.1□□□□□ -0.95
SHC1YER096W VPS24P36095 224 aaKnown RBP9.09□□□□□ -0.95
SHC1YER096W RTS1P38903 757 aa9.09□□□□□ -0.95
SHC1YER096W SLN1P39928 1220 aaPredicted RBP9.09□□□□□ -0.95
SHC1YER096W EPL1P43572 832 aa9.09□□□□□ -0.95
SHC1YER096W TRM44Q02648 567 aaKnown RBP9.09□□□□□ -0.95
SHC1YER096W ESF1Q06344 628 aaKnown RBP9.09□□□□□ -0.95
SHC1YER096W ACK1Q07622 623 aaPredicted RBP9.09□□□□□ -0.95
SHC1YER096W RPL19AP0CX82 189 aaKnown RBP9.08□□□□□ -0.96
SHC1YER096W RPL19BP0CX83 189 aaPredicted RBP9.08□□□□□ -0.96
SHC1YER096W MATALPHA2P0CY08 210 aa9.08□□□□□ -0.96
SHC1YER096W HMLALPHA2P0CY09 210 aa9.08□□□□□ -0.96
SHC1YER096W ANP1P32629 500 aa9.08□□□□□ -0.96
SHC1YER096W TFC6Q06339 672 aa9.08□□□□□ -0.96
SHC1YER096W MYO1P08964 1928 aa9.08□□□□□ -0.96
SHC1YER096W CPA2P03965 1118 aaKnown RBP9.07□□□□□ -0.96
SHC1YER096W MBR1P23493 339 aa9.07□□□□□ -0.96
SHC1YER096W VID27P40157 782 aa9.07□□□□□ -0.96
SHC1YER096W CSM2P40465 213 aa9.07□□□□□ -0.96
SHC1YER096W ARP5P53946 755 aa9.07□□□□□ -0.96
SHC1YER096W YPL260WQ08977 551 aa9.07□□□□□ -0.96
SHC1YER096W RAD61Q99359 647 aa9.07□□□□□ -0.96
SHC1YER096W AKR1P39010 764 aa9.06□□□□□ -0.96
SHC1YER096W FET4P40988 552 aa9.06□□□□□ -0.96
SHC1YER096W FPK1P53739 893 aa9.06□□□□□ -0.96
SHC1YER096W YLR407WQ06070 228 aa9.06□□□□□ -0.96
SHC1YER096W MRD1Q06106 887 aaKnown RBP9.06□□□□□ -0.96
SHC1YER096W EST2Q06163 884 aa9.06□□□□□ -0.96
SHC1YER096W KEL3Q08979 651 aaPredicted RBP9.06□□□□□ -0.96
SHC1YER096W YLR278CQ05854 1341 aa9.06□□□□□ -0.96
SHC1YER096W SSA1P10591 642 aaKnown RBP9.05□□□□□ -0.96
SHC1YER096W BIK1P11709 440 aa9.05□□□□□ -0.96
SHC1YER096W MSM1P22438 575 aa9.05□□□□□ -0.96
SHC1YER096W MSP1P28737 362 aa9.05□□□□□ -0.96
SHC1YER096W SLI15P38283 698 aa9.05□□□□□ -0.96
SHC1YER096W YKE2P52553 114 aa9.05□□□□□ -0.96
SHC1YER096W RIT1P23796 513 aa9.05□□□□□ -0.96
SHC1YER096W BDH2P39713 417 aa9.05□□□□□ -0.96
SHC1YER096W YPL150WQ12152 901 aa9.05□□□□□ -0.96
SHC1YER096W RPS9BP05755 195 aaKnown RBP9.04□□□□□ -0.96
SHC1YER096W ROX1P25042 368 aa9.04□□□□□ -0.96
SHC1YER096W PRX1P34227 261 aaKnown RBP9.04□□□□□ -0.96
SHC1YER096W YHL017WP38745 532 aa9.04□□□□□ -0.96
SHC1YER096W SSP1P38871 571 aa9.04□□□□□ -0.96
SHC1YER096W EAF7P53911 425 aaKnown RBP9.04□□□□□ -0.96
SHC1YER096W CRF1Q04930 467 aa9.04□□□□□ -0.96
SHC1YER096W ELG1Q12050 791 aa9.04□□□□□ -0.96
SHC1YER096W THS1P04801 734 aaKnown RBP9.03□□□□□ -0.96
SHC1YER096W HPR1P17629 752 aaKnown RBP9.03□□□□□ -0.96
SHC1YER096W GLC3P32775 704 aa9.03□□□□□ -0.96
SHC1YER096W SNF7P39929 240 aaKnown RBP9.03□□□□□ -0.96
SHC1YER096W CIR1P42940 261 aa9.03□□□□□ -0.96
SHC1YER096W SEN54Q02825 467 aaPredicted RBP9.03□□□□□ -0.96
SHC1YER096W MYO5Q04439 1219 aaKnown RBP9.03□□□□□ -0.96
SHC1YER096W YOR111WQ99210 232 aa9.03□□□□□ -0.96
SHC1YER096W PFK2P16862 959 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
SHC1YER096W MAK31P23059 88 aa9.02□□□□□ -0.97
SHC1YER096W KEL1P38853 1164 aaKnown RBP9.02□□□□□ -0.97
SHC1YER096W MSH4P40965 878 aaPredicted RBP9.02□□□□□ -0.97
SHC1YER096W YGR117CP53270 476 aa9.02□□□□□ -0.97
SHC1YER096W HST1P53685 503 aa9.02□□□□□ -0.97
SHC1YER096W HAP5Q02516 242 aa9.02□□□□□ -0.97
SHC1YER096W TIM50Q02776 476 aa9.02□□□□□ -0.97
SHC1YER096W PCL8Q08966 492 aa9.02□□□□□ -0.97
SHC1YER096W HCA4P20448 770 aaKnown RBP9.01□□□□□ -0.97
SHC1YER096W OXP1P28273 1286 aa9.01□□□□□ -0.97
SHC1YER096W CHS3P29465 1165 aa9.01□□□□□ -0.97
SHC1YER096W TUB2P02557 457 aaKnown RBP9□□□□□ -0.97
SHC1YER096W CBP1P07252 654 aa9□□□□□ -0.97
SHC1YER096W SRP54P20424 541 aaKnown RBP9□□□□□ -0.97
SHC1YER096W ACE2P21192 770 aa9□□□□□ -0.97
SHC1YER096W VPS1P21576 704 aaKnown RBP9□□□□□ -0.97
SHC1YER096W SWI4P25302 1093 aaKnown RBP9□□□□□ -0.97
SHC1YER096W ADP1P25371 1049 aa9□□□□□ -0.97
SHC1YER096W SPB4P25808 606 aaPredicted RBP9□□□□□ -0.97
SHC1YER096W RPN10P38886 268 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms