RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 BCAR3O75815 825 aa13.45□□□□□ -0.26
DDX11-213ENST00000539049 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
DDX11-213ENST00000539049 EIF3AQ14152 1382 aaKnown RBP13.45□□□□□ -0.26
DDX11-213ENST00000539049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDX11-213ENST00000539049 CHAF1AQ13111 956 aaPredicted RBP13.44□□□□□ -0.26
DDX11-213ENST00000539049 ZSCAN23Q3MJ62 389 aa13.44□□□□□ -0.26
DDX11-213ENST00000539049 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
DDX11-213ENST00000539049 MLECQ14165 292 aa13.43□□□□□ -0.26
DDX11-213ENST00000539049 PARD3Q8TEW0 1356 aa13.43□□□□□ -0.26
DDX11-213ENST00000539049 DDIT3P35638 169 aa13.43□□□□□ -0.26
DDX11-213ENST00000539049 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
DDX11-213ENST00000539049 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
DDX11-213ENST00000539049 NOLC1Q14978 699 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX11-213ENST00000539049 TERF2Q15554 542 aa13.43□□□□□ -0.26
DDX11-213ENST00000539049 FEZ2Q9UHY8 353 aaPredicted RBP13.43□□□□□ -0.26
DDX11-213ENST00000539049 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
DDX11-213ENST00000539049 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
DDX11-213ENST00000539049 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
DDX11-213ENST00000539049 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
DDX11-213ENST00000539049 SMC5Q8IY18 1101 aa13.41□□□□□ -0.26
DDX11-213ENST00000539049 ANKRD7Q92527 254 aa13.41□□□□□ -0.26
DDX11-213ENST00000539049 DIAPH3Q9NSV4 1193 aa13.41□□□□□ -0.26
DDX11-213ENST00000539049 GTF2A1P52655 376 aaPredicted RBP13.41□□□□□ -0.26
DDX11-213ENST00000539049 ADCY10Q96PN6 1610 aa13.41□□□□□ -0.26
DDX11-213ENST00000539049 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
DDX11-213ENST00000539049 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
DDX11-213ENST00000539049 STK26Q9P289 416 aa13.41□□□□□ -0.26
DDX11-213ENST00000539049 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
DDX11-213ENST00000539049 RSPH14Q9UHP6 348 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 E9PCH4 1651 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 SSFA2P28290 1259 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
DDX11-213ENST00000539049 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
DDX11-213ENST00000539049 EP400NLQ6ZTU2 488 aa13.39□□□□□ -0.27
DDX11-213ENST00000539049 MYCBPQ99417 103 aaPredicted RBP13.38□□□□□ -0.27
DDX11-213ENST00000539049 GGT6Q6P531 493 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 MPNDQ8N594 471 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 RNF214Q8ND24 703 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 CDC42BPAQ5VT25 1732 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 PRAG1Q86YV5 1406 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
DDX11-213ENST00000539049 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
DDX11-213ENST00000539049 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
DDX11-213ENST00000539049 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
DDX11-213ENST00000539049 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
DDX11-213ENST00000539049 TMED8Q6PL24 325 aaPredicted RBP13.37□□□□□ -0.27
DDX11-213ENST00000539049 TMX1Q9H3N1 280 aa13.37□□□□□ -0.27
DDX11-213ENST00000539049 PTPRGP23470 1445 aa13.37□□□□□ -0.27
DDX11-213ENST00000539049 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
DDX11-213ENST00000539049 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
DDX11-213ENST00000539049 FKBP5Q13451 457 aaPredicted RBP13.36□□□□□ -0.27
DDX11-213ENST00000539049 C17orf53Q8N3J3 647 aaPredicted RBP13.36□□□□□ -0.27
DDX11-213ENST00000539049 DISP3Q9P2K9 1392 aa13.36□□□□□ -0.27
DDX11-213ENST00000539049 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
DDX11-213ENST00000539049 DDX41Q9UJV9 622 aaKnown RBP13.36□□□□□ -0.27
DDX11-213ENST00000539049 KIF3BO15066 747 aa13.36□□□□□ -0.27
DDX11-213ENST00000539049 TMEM132EQ6IEE7 984 aa13.36□□□□□ -0.27
DDX11-213ENST00000539049 KRT222Q8N1A0 295 aa13.36□□□□□ -0.27
DDX11-213ENST00000539049 SNX21Q969T3 373 aa13.35□□□□□ -0.27
DDX11-213ENST00000539049 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
DDX11-213ENST00000539049 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 ATP10BO94823 1461 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 ELL2O00472 640 aaPredicted RBP13.34□□□□□ -0.27
DDX11-213ENST00000539049 TESK2Q96S53 571 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 NCAPGQ9BPX3 1015 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 ZMYM3Q14202 1370 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 RAD51AP2Q09MP3 1159 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 RASSF4Q9H2L5 321 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
DDX11-213ENST00000539049 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.27
DDX11-213ENST00000539049 OSCARQ8IYS5 282 aa13.33□□□□□ -0.27
DDX11-213ENST00000539049 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.27
DDX11-213ENST00000539049 TNNQ9UQP3 1299 aa13.33□□□□□ -0.27
DDX11-213ENST00000539049 BLMP54132 1417 aaPredicted RBP13.33□□□□□ -0.28
DDX11-213ENST00000539049 COL17A1Q9UMD9 1497 aaPredicted RBP13.33□□□□□ -0.28
DDX11-213ENST00000539049 APBB1O00213 710 aa13.33□□□□□ -0.28
DDX11-213ENST00000539049 CTR9Q6PD62 1173 aa13.33□□□□□ -0.28
DDX11-213ENST00000539049 LRSAM1Q6UWE0 723 aa13.33□□□□□ -0.28
DDX11-213ENST00000539049 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
DDX11-213ENST00000539049 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
DDX11-213ENST00000539049 MORC2Q9Y6X9 1032 aaPredicted RBP13.33□□□□□ -0.28
DDX11-213ENST00000539049 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
DDX11-213ENST00000539049 ZMYM4Q5VZL5 1548 aa13.33□□□□□ -0.28
DDX11-213ENST00000539049 SYCE3A1L190 88 aa13.32□□□□□ -0.28
DDX11-213ENST00000539049 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
DDX11-213ENST00000539049 HNRNPH2P55795 449 aaKnown RBP13.32□□□□□ -0.28
DDX11-213ENST00000539049 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
DDX11-213ENST00000539049 GPATCH11Q8N954 259 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms