RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 ZMYM3Q14202 1370 aa7.46□□□□□ -1.22
RNU4-25P-201ENST00000410569 CASKIN1Q8WXD9 1431 aa7.45□□□□□ -1.22
RNU4-25P-201ENST00000410569 A2MP01023 1474 aa7.45□□□□□ -1.22
RNU4-25P-201ENST00000410569 FYCO1Q9BQS8 1478 aa7.45□□□□□ -1.22
RNU4-25P-201ENST00000410569 TTC13Q8NBP0 860 aa7.45□□□□□ -1.22
RNU4-25P-201ENST00000410569 GPATCH8Q9UKJ3 1502 aaKnown RBP7.44□□□□□ -1.22
RNU4-25P-201ENST00000410569 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
RNU4-25P-201ENST00000410569 C3orf80F5H4A9 247 aa7.44□□□□□ -1.22
RNU4-25P-201ENST00000410569 SEMA3EO15041 775 aa7.44□□□□□ -1.22
RNU4-25P-201ENST00000410569 BCAMP50895 628 aa7.44□□□□□ -1.22
RNU4-25P-201ENST00000410569 ESF1Q9H501 851 aaKnown RBP7.44□□□□□ -1.22
RNU4-25P-201ENST00000410569 KDM2AQ9Y2K7 1162 aa7.44□□□□□ -1.22
RNU4-25P-201ENST00000410569 CPS1P31327 1500 aa7.43□□□□□ -1.22
RNU4-25P-201ENST00000410569 TIAM1Q13009 1591 aa7.43□□□□□ -1.22
RNU4-25P-201ENST00000410569 VWDEQ8N2E2 1590 aa7.43□□□□□ -1.22
RNU4-25P-201ENST00000410569 NBPF26B4DH59 902 aa7.43□□□□□ -1.22
RNU4-25P-201ENST00000410569 TATDN2Q93075 761 aa7.43□□□□□ -1.22
RNU4-25P-201ENST00000410569 STRCP1A6NGW2 1772 aa7.43□□□□□ -1.22
RNU4-25P-201ENST00000410569 A2ML1A8K2U0 1454 aa7.43□□□□□ -1.22
RNU4-25P-201ENST00000410569 SMAPO00193 183 aa7.42□□□□□ -1.22
RNU4-25P-201ENST00000410569 UBTFP17480 764 aaKnown RBP7.42□□□□□ -1.22
RNU4-25P-201ENST00000410569 PNMA3Q9UL41 463 aa7.42□□□□□ -1.22
RNU4-25P-201ENST00000410569 RNF17Q9BXT8 1623 aaKnown RBP7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 TESPA1A2RU30 521 aaPredicted RBP7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 PTGDRQ13258 359 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 PADI6Q6TGC4 694 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 SPAG9O60271 1321 aaKnown RBP7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 KIAA1107Q9UPP5 1409 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 PLEKHH2Q8IVE3 1493 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 KDM5DQ9BY66 1539 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 SYNMO15061 1565 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 DEPDC5O75140 1603 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 IQGAP1P46940 1657 aa7.41□□□□□ -1.22
RNU4-25P-201ENST00000410569 HSPA1LP34931 641 aa7.4□□□□□ -1.22
RNU4-25P-201ENST00000410569 IFFO2Q5TF58 517 aa7.4□□□□□ -1.22
RNU4-25P-201ENST00000410569 NYAP1Q6ZVC0 841 aa7.4□□□□□ -1.22
RNU4-25P-201ENST00000410569 NUDT18Q6ZVK8 323 aa7.4□□□□□ -1.22
RNU4-25P-201ENST00000410569 LRCH3Q96II8 777 aa7.4□□□□□ -1.22
RNU4-25P-201ENST00000410569 SHANK2Q9UPX8 1470 aa7.4□□□□□ -1.22
RNU4-25P-201ENST00000410569 ZC3H13Q5T200 1668 aaKnown RBP7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 FAM135AQ9P2D6 1515 aa7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 PZPP20742 1482 aa7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 HNRNPMP52272 730 aaKnown RBP eCLIP7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 VSIG10Q8N0Z9 540 aa7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 WBP1LQ9NX94 342 aa7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 TSR3Q9UJK0 312 aaKnown RBP7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 ZNF777Q9ULD5 760 aaPredicted RBP7.39□□□□□ -1.23
RNU4-25P-201ENST00000410569 EHBP1L1Q8N3D4 1523 aa7.38□□□□□ -1.23
RNU4-25P-201ENST00000410569 SAMD7Q7Z3H4 446 aa7.38□□□□□ -1.23
RNU4-25P-201ENST00000410569 HPS5Q9UPZ3 1129 aa7.38□□□□□ -1.23
RNU4-25P-201ENST00000410569 XIRP1Q702N8 1843 aaKnown RBP7.38□□□□□ -1.23
RNU4-25P-201ENST00000410569 MBD5Q9P267 1494 aa7.37□□□□□ -1.23
RNU4-25P-201ENST00000410569 TNRQ92752 1358 aa7.37□□□□□ -1.23
RNU4-25P-201ENST00000410569 PIP4K2BP78356 416 aa7.37□□□□□ -1.23
RNU4-25P-201ENST00000410569 MED14O60244 1454 aa7.36□□□□□ -1.23
RNU4-25P-201ENST00000410569 NUTM2FA1L443 756 aa7.36□□□□□ -1.23
RNU4-25P-201ENST00000410569 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
RNU4-25P-201ENST00000410569 GGT6Q6P531 493 aa7.36□□□□□ -1.23
RNU4-25P-201ENST00000410569 EYA1Q99502 592 aa7.36□□□□□ -1.23
RNU4-25P-201ENST00000410569 UGGT1Q9NYU2 1555 aa7.36□□□□□ -1.23
RNU4-25P-201ENST00000410569 CEP152O94986 1710 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 UBR1Q8IWV7 1749 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 CCNB3Q8WWL7 1395 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 MROH1Q8NDA8 1641 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 FCHSD2O94868 740 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 SMYD5Q6GMV2 418 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 LRRC7Q96NW7 1537 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 NLRP1Q9C000 1473 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 RTEL1-TNFRSF6BF6WH68 1400 aa7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 NPHP4O75161 1426 aaPredicted RBP7.35□□□□□ -1.23
RNU4-25P-201ENST00000410569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.34□□□□□ -1.23
RNU4-25P-201ENST00000410569 CFDP1Q9UEE9 299 aaPredicted RBP7.34□□□□□ -1.23
RNU4-25P-201ENST00000410569 SETD1AO15047 1707 aaKnown RBP7.34□□□□□ -1.23
RNU4-25P-201ENST00000410569 CAMSAP2Q08AD1 1489 aa7.34□□□□□ -1.23
RNU4-25P-201ENST00000410569 CCDC141Q6ZP82 1450 aa7.34□□□□□ -1.23
RNU4-25P-201ENST00000410569 MTUS2Q5JR59 1369 aa7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 ZNF644Q9H582 1327 aaPredicted RBP7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 ABCC3O15438 1527 aa7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 TOM1O60784 492 aa7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 PPP4CP60510 307 aa7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 RBM26Q5T8P6 1007 aaKnown RBP7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 FBXO31Q5XUX0 539 aaPredicted RBP7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 ADGRG1Q9Y653 693 aa7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 EIF2AK4Q9P2K8 1649 aaKnown RBP7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 ARHGEF5Q12774 1597 aa7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 DHX29Q7Z478 1369 aaKnown RBP7.33□□□□□ -1.24
RNU4-25P-201ENST00000410569 ERVK-7P63135 1459 aa7.32□□□□□ -1.24
RNU4-25P-201ENST00000410569 HDGFP51858 240 aaKnown RBP7.32□□□□□ -1.24
RNU4-25P-201ENST00000410569 CEP162Q5TB80 1403 aa7.32□□□□□ -1.24
RNU4-25P-201ENST00000410569 A0A0G2JS52 829 aa7.31□□□□□ -1.24
RNU4-25P-201ENST00000410569 GPR37O15354 613 aa7.31□□□□□ -1.24
RNU4-25P-201ENST00000410569 SWT1Q5T5J6 900 aaKnown RBP7.31□□□□□ -1.24
RNU4-25P-201ENST00000410569 MIA2Q96PC5 1412 aa7.31□□□□□ -1.24
RNU4-25P-201ENST00000410569 MAST1Q9Y2H9 1570 aa7.31□□□□□ -1.24
RNU4-25P-201ENST00000410569 KIF3BO15066 747 aa7.3□□□□□ -1.24
RNU4-25P-201ENST00000410569 HIC1Q14526 733 aa7.3□□□□□ -1.24
RNU4-25P-201ENST00000410569 RBM46Q8TBY0 533 aaKnown RBP7.3□□□□□ -1.24
RNU4-25P-201ENST00000410569 CFAP65Q6ZU64 1925 aaKnown RBP7.3□□□□□ -1.24
RNU4-25P-201ENST00000410569 NCOA2Q15596 1464 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms