RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
VHL-202ENST00000345392 ZNF518AQ6AHZ1 1483 aa22.4■■□□□ 1.18
VHL-202ENST00000345392 MYO3AQ8NEV4 1616 aa22.39■■□□□ 1.18
VHL-202ENST00000345392 NEURL4Q96JN8 1562 aa22.39■■□□□ 1.17
VHL-202ENST00000345392 HDAC1Q13547 482 aaPredicted RBP22.38■■□□□ 1.17
VHL-202ENST00000345392 ADGRB1O14514 1584 aa22.38■■□□□ 1.17
VHL-202ENST00000345392 DDX11L8A8MPP1 907 aa22.37■■□□□ 1.17
VHL-202ENST00000345392 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
VHL-202ENST00000345392 NEO1Q92859 1461 aa22.36■■□□□ 1.17
VHL-202ENST00000345392 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
VHL-202ENST00000345392 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
VHL-202ENST00000345392 TMEM57Q8N5G2 664 aa22.35■■□□□ 1.17
VHL-202ENST00000345392 U2SURPO15042 1029 aaKnown RBP22.35■■□□□ 1.17
VHL-202ENST00000345392 FRMPD1Q5SYB0 1578 aa22.35■■□□□ 1.17
VHL-202ENST00000345392 PPLO60437 1756 aa22.35■■□□□ 1.17
VHL-202ENST00000345392 ERBB4Q15303 1308 aa22.35■■□□□ 1.17
VHL-202ENST00000345392 SMC5Q8IY18 1101 aa22.34■■□□□ 1.17
VHL-202ENST00000345392 TNPO1Q92973 898 aaKnown RBP22.34■■□□□ 1.17
VHL-202ENST00000345392 LNPKQ9C0E8 428 aa22.34■■□□□ 1.17
VHL-202ENST00000345392 POGZQ7Z3K3 1410 aa22.34■■□□□ 1.17
VHL-202ENST00000345392 GAS2L3Q86XJ1 694 aa22.34■■□□□ 1.17
VHL-202ENST00000345392 FOXD4L1Q9NU39 408 aa22.34■■□□□ 1.17
VHL-202ENST00000345392 ZC3H13Q5T200 1668 aaKnown RBP22.33■■□□□ 1.17
VHL-202ENST00000345392 GGNBP2Q9H3C7 697 aa22.33■■□□□ 1.17
VHL-202ENST00000345392 CFAP74Q9C0B2 1584 aa22.33■■□□□ 1.17
VHL-202ENST00000345392 SETBP1Q9Y6X0 1596 aa22.33■■□□□ 1.17
VHL-202ENST00000345392 LMTK2Q8IWU2 1503 aa22.33■■□□□ 1.16
VHL-202ENST00000345392 DDIT3P35638 169 aa22.33■■□□□ 1.16
VHL-202ENST00000345392 ESPNB1AK53 854 aa22.32■■□□□ 1.16
VHL-202ENST00000345392 HSP90AB1P08238 724 aaKnown RBP22.31■■□□□ 1.16
VHL-202ENST00000345392 TRIM35Q9UPQ4 493 aa22.31■■□□□ 1.16
VHL-202ENST00000345392 EVC2Q86UK5 1308 aa22.3■■□□□ 1.16
VHL-202ENST00000345392 HSP90AA1P07900 732 aaKnown RBP22.3■■□□□ 1.16
VHL-202ENST00000345392 TMPOP42166 694 aaKnown RBP22.3■■□□□ 1.16
VHL-202ENST00000345392 RBM25P49756 843 aaKnown RBP22.3■■□□□ 1.16
VHL-202ENST00000345392 ZBTB40Q9NUA8 1239 aa22.3■■□□□ 1.16
VHL-202ENST00000345392 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
VHL-202ENST00000345392 TULP4Q9NRJ4 1543 aa22.3■■□□□ 1.16
VHL-202ENST00000345392 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
VHL-202ENST00000345392 YEATS2Q9ULM3 1422 aa22.28■■□□□ 1.16
VHL-202ENST00000345392 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
VHL-202ENST00000345392 CD2BP2O95400 341 aaKnown RBP22.27■■□□□ 1.16
VHL-202ENST00000345392 NUCB1Q02818 461 aa22.27■■□□□ 1.16
VHL-202ENST00000345392 HSP90AA2PQ14568 343 aaPredicted RBP22.27■■□□□ 1.16
VHL-202ENST00000345392 SNX21Q969T3 373 aa22.27■■□□□ 1.16
VHL-202ENST00000345392 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
VHL-202ENST00000345392 SIGLEC1Q9BZZ2 1709 aa22.27■■□□□ 1.16
VHL-202ENST00000345392 TRIM44Q96DX7 344 aaPredicted RBP22.27■■□□□ 1.16
VHL-202ENST00000345392 MINK1Q8N4C8 1332 aaPredicted RBP22.27■■□□□ 1.16
VHL-202ENST00000345392 ABCC3O15438 1527 aa22.26■■□□□ 1.15
VHL-202ENST00000345392 IDI1Q13907 227 aa22.26■■□□□ 1.15
VHL-202ENST00000345392 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
VHL-202ENST00000345392 RICTORQ6R327 1708 aa22.25■■□□□ 1.15
VHL-202ENST00000345392 CHD1LQ86WJ1 897 aa22.25■■□□□ 1.15
VHL-202ENST00000345392 RAB3GAP1Q15042 981 aa22.24■■□□□ 1.15
VHL-202ENST00000345392 NCBP3Q53F19 620 aaKnown RBP22.24■■□□□ 1.15
VHL-202ENST00000345392 GBP4Q96PP9 640 aa22.24■■□□□ 1.15
VHL-202ENST00000345392 A0A1W2PP64 1363 aa22.24■■□□□ 1.15
VHL-202ENST00000345392 KIF2CQ99661 725 aa22.24■■□□□ 1.15
VHL-202ENST00000345392 RBM42Q9BTD8 480 aaKnown RBP22.24■■□□□ 1.15
VHL-202ENST00000345392 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
VHL-202ENST00000345392 RIPK4P57078 832 aa22.24■■□□□ 1.15
VHL-202ENST00000345392 FBLN1P23142 703 aa22.23■■□□□ 1.15
VHL-202ENST00000345392 HECW2Q9P2P5 1572 aa22.23■■□□□ 1.15
VHL-202ENST00000345392 ISY1Q9ULR0 285 aaKnown RBP22.23■■□□□ 1.15
VHL-202ENST00000345392 GLIPR1L2Q4G1C9 344 aa22.22■■□□□ 1.15
VHL-202ENST00000345392 ANKRD45Q5TZF3 282 aa22.22■■□□□ 1.15
VHL-202ENST00000345392 ARHGEF28Q8N1W1 1705 aaKnown RBP22.22■■□□□ 1.15
VHL-202ENST00000345392 CAMSAP1Q5T5Y3 1602 aa22.22■■□□□ 1.15
VHL-202ENST00000345392 ADGRB2O60241 1585 aa22.22■■□□□ 1.15
VHL-202ENST00000345392 RPGRIP1LQ68CZ1 1315 aa22.22■■□□□ 1.15
VHL-202ENST00000345392 VSIG10Q8N0Z9 540 aa22.21■■□□□ 1.15
VHL-202ENST00000345392 C1orf115Q9H7X2 142 aa22.21■■□□□ 1.15
VHL-202ENST00000345392 CIZ1Q9ULV3 898 aaPredicted RBP22.2■■□□□ 1.14
VHL-202ENST00000345392 MLH3Q9UHC1 1453 aa22.2■■□□□ 1.14
VHL-202ENST00000345392 IPO8O15397 1037 aaKnown RBP22.2■■□□□ 1.14
VHL-202ENST00000345392 MLECQ14165 292 aa22.2■■□□□ 1.14
VHL-202ENST00000345392 NEXMIFQ5QGS0 1516 aa22.19■■□□□ 1.14
VHL-202ENST00000345392 PRAM1Q96QH2 718 aa22.19■■□□□ 1.14
VHL-202ENST00000345392 KIF16BQ96L93 1317 aa22.18■■□□□ 1.14
VHL-202ENST00000345392 RRP9O43818 475 aaKnown RBP22.18■■□□□ 1.14
VHL-202ENST00000345392 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
VHL-202ENST00000345392 SSFA2P28290 1259 aa22.18■■□□□ 1.14
VHL-202ENST00000345392 SKOR2Q2VWA4 1001 aaPredicted RBP22.17■■□□□ 1.14
VHL-202ENST00000345392 USP32Q8NFA0 1604 aa22.17■■□□□ 1.14
VHL-202ENST00000345392 ABCC11Q96J66 1382 aa22.16■■□□□ 1.14
VHL-202ENST00000345392 TBC1D9Q6ZT07 1266 aa22.16■■□□□ 1.14
VHL-202ENST00000345392 K7ELQ4 463 aaPredicted RBP22.16■■□□□ 1.14
VHL-202ENST00000345392 FYB1O15117 783 aa22.16■■□□□ 1.14
VHL-202ENST00000345392 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
VHL-202ENST00000345392 NSD2O96028 1365 aa22.16■■□□□ 1.14
VHL-202ENST00000345392 FBXO31Q5XUX0 539 aaPredicted RBP22.14■■□□□ 1.13
VHL-202ENST00000345392 IL16Q14005 1332 aa22.14■■□□□ 1.13
VHL-202ENST00000345392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.13■■□□□ 1.13
VHL-202ENST00000345392 ZBTB7BO15156 539 aaPredicted RBP22.12■■□□□ 1.13
VHL-202ENST00000345392 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
VHL-202ENST00000345392 MYO5BQ9ULV0 1848 aa22.12■■□□□ 1.13
VHL-202ENST00000345392 DIP2CQ9Y2E4 1556 aa22.11■■□□□ 1.13
VHL-202ENST00000345392 NASPP49321 788 aaPredicted RBP22.11■■□□□ 1.13
VHL-202ENST00000345392 ZMYND15Q9H091 742 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms