RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Kif16bB1AVY7 1312 aa23.88■■□□□ 1.41
Trim47-202ENSMUST00000106441 Als2Q920R0 1651 aa23.87■■□□□ 1.41
Trim47-202ENSMUST00000106441 Slain2Q8CI08 581 aa23.87■■□□□ 1.41
Trim47-202ENSMUST00000106441 Ppp2r1aQ76MZ3 589 aa23.86■■□□□ 1.41
Trim47-202ENSMUST00000106441 Zranb1Q7M760 708 aa23.86■■□□□ 1.41
Trim47-202ENSMUST00000106441 FanciQ8K368 1330 aa23.86■■□□□ 1.41
Trim47-202ENSMUST00000106441 Evi5lH3BKQ3 813 aa23.85■■□□□ 1.41
Trim47-202ENSMUST00000106441 Gtf3c3Q3TMP1 882 aa23.85■■□□□ 1.41
Trim47-202ENSMUST00000106441 Zmym3Q9JLM4 1370 aa23.85■■□□□ 1.41
Trim47-202ENSMUST00000106441 Fam184bQ0KK56 942 aa23.84■■□□□ 1.41
Trim47-202ENSMUST00000106441 Tnrc6bQ8BKI2 1810 aaKnown RBP23.84■■□□□ 1.41
Trim47-202ENSMUST00000106441 Esx1O88933 382 aa23.84■■□□□ 1.41
Trim47-202ENSMUST00000106441 Iqcf3Q9D498 203 aa23.84■■□□□ 1.41
Trim47-202ENSMUST00000106441 Irx3P81067 507 aa23.82■■□□□ 1.4
Trim47-202ENSMUST00000106441 Plekhh1Q80TI1 1356 aa23.82■■□□□ 1.4
Trim47-202ENSMUST00000106441 Sirt1Q923E4 737 aa23.81■■□□□ 1.4
Trim47-202ENSMUST00000106441 Ttll13A4Q9F6 804 aa23.81■■□□□ 1.4
Trim47-202ENSMUST00000106441 Znf316Q6PGE4 1016 aa23.8■■□□□ 1.4
Trim47-202ENSMUST00000106441 Abcc10Q8R4P9 1501 aa23.8■■□□□ 1.4
Trim47-202ENSMUST00000106441 Rwdd1Q9CQK7 243 aa23.79■■□□□ 1.4
Trim47-202ENSMUST00000106441 N4bp2F8VQG7 1678 aaKnown RBP23.79■■□□□ 1.4
Trim47-202ENSMUST00000106441 Amigo3Q8C2S7 508 aa23.76■■□□□ 1.39
Trim47-202ENSMUST00000106441 Sipa1l2Q80TE4 1722 aa23.76■■□□□ 1.39
Trim47-202ENSMUST00000106441 Kdm2bQ6P1G2 1309 aa23.76■■□□□ 1.39
Trim47-202ENSMUST00000106441 Iqsec2Q5DU25 1478 aa23.76■■□□□ 1.39
Trim47-202ENSMUST00000106441 PtpruB1AUH1 1446 aa23.75■■□□□ 1.39
Trim47-202ENSMUST00000106441 Map3k19E9Q3S4 1311 aa23.75■■□□□ 1.39
Trim47-202ENSMUST00000106441 Sox12Q04890 314 aa23.75■■□□□ 1.39
Trim47-202ENSMUST00000106441 CrbnQ8C7D2 445 aa23.75■■□□□ 1.39
Trim47-202ENSMUST00000106441 Idi1P58044 227 aa23.74■■□□□ 1.39
Trim47-202ENSMUST00000106441 Idi2Q8BFZ6 227 aa23.74■■□□□ 1.39
Trim47-202ENSMUST00000106441 Adgrl1Q80TR1 1466 aa23.73■■□□□ 1.39
Trim47-202ENSMUST00000106441 Mon2Q80TL7 1715 aa23.73■■□□□ 1.39
Trim47-202ENSMUST00000106441 Atf3Q60765 181 aa23.72■■□□□ 1.39
Trim47-202ENSMUST00000106441 NgefQ8CHT1 710 aa23.72■■□□□ 1.39
Trim47-202ENSMUST00000106441 Amer1Q7TS75 1132 aa23.72■■□□□ 1.39
Trim47-202ENSMUST00000106441 Nrxn1Q9CS84 1514 aa23.71■■□□□ 1.39
Trim47-202ENSMUST00000106441 EspnQ9ET47 871 aa23.7■■□□□ 1.38
Trim47-202ENSMUST00000106441 Ap3b2Q9JME5 1082 aa23.7■■□□□ 1.38
Trim47-202ENSMUST00000106441 Brinp3Q499E0 766 aa23.69■■□□□ 1.38
Trim47-202ENSMUST00000106441 CatipB9EKE5 520 aa23.68■■□□□ 1.38
Trim47-202ENSMUST00000106441 Tmem2Q5FWI3 1383 aa23.67■■□□□ 1.38
Trim47-202ENSMUST00000106441 Prdm10Q3UTQ7 1184 aa23.67■■□□□ 1.38
Trim47-202ENSMUST00000106441 Wnk3Q80XP9 1757 aa23.67■■□□□ 1.38
Trim47-202ENSMUST00000106441 Kif7B7ZNG0 1348 aa23.66■■□□□ 1.38
Trim47-202ENSMUST00000106441 ChgaP26339 463 aaKnown RBP23.65■■□□□ 1.38
Trim47-202ENSMUST00000106441 NinlQ6ZQ12 1394 aa23.65■■□□□ 1.38
Trim47-202ENSMUST00000106441 Usp19Q3UJD6 1360 aa23.64■■□□□ 1.37
Trim47-202ENSMUST00000106441 Speer4f1Q9D5Q6 258 aa23.63■■□□□ 1.37
Trim47-202ENSMUST00000106441 Dcaf11Q91VU6 549 aa23.62■■□□□ 1.37
Trim47-202ENSMUST00000106441 Nlrp6Q91WS2 869 aa23.62■■□□□ 1.37
Trim47-202ENSMUST00000106441 Nkx1-2P42580 305 aa23.62■■□□□ 1.37
Trim47-202ENSMUST00000106441 Mapk8ip3Q9ESN9 1337 aa23.62■■□□□ 1.37
Trim47-202ENSMUST00000106441 Ccdc30Q8BVF4 654 aa23.61■■□□□ 1.37
Trim47-202ENSMUST00000106441 Camta1A2A891 1682 aa23.61■■□□□ 1.37
Trim47-202ENSMUST00000106441 Kcna6Q61923 529 aa23.61■■□□□ 1.37
Trim47-202ENSMUST00000106441 Gprasp1Q5U4C1 1347 aa23.6■■□□□ 1.37
Trim47-202ENSMUST00000106441 Smc5Q8CG46 1101 aaKnown RBP23.59■■□□□ 1.37
Trim47-202ENSMUST00000106441 Chmp5Q9D7S9 219 aa23.59■■□□□ 1.37
Trim47-202ENSMUST00000106441 Kif1aP33173 1695 aa23.59■■□□□ 1.37
Trim47-202ENSMUST00000106441 B4galnt3Q6L8S8 986 aa23.59■■□□□ 1.37
Trim47-202ENSMUST00000106441 Farp2Q91VS8 1065 aa23.58■■□□□ 1.37
Trim47-202ENSMUST00000106441 Znf335A2A5K6 1337 aa23.58■■□□□ 1.37
Trim47-202ENSMUST00000106441 Ralbp1Q62172 648 aa23.57■■□□□ 1.36
Trim47-202ENSMUST00000106441 CanxP35564 591 aaKnown RBP23.57■■□□□ 1.36
Trim47-202ENSMUST00000106441 NudcO35685 332 aaKnown RBP23.56■■□□□ 1.36
Trim47-202ENSMUST00000106441 Golga2Q921M4 999 aa23.55■■□□□ 1.36
Trim47-202ENSMUST00000106441 Bcl11bQ99PV8 884 aa23.55■■□□□ 1.36
Trim47-202ENSMUST00000106441 Fgd1P52734 960 aa23.54■■□□□ 1.36
Trim47-202ENSMUST00000106441 GnpatP98192 678 aa23.54■■□□□ 1.36
Trim47-202ENSMUST00000106441 Ppm1gQ61074 542 aa23.54■■□□□ 1.36
Trim47-202ENSMUST00000106441 DccP70211 1447 aa23.53■■□□□ 1.36
Trim47-202ENSMUST00000106441 KdrP35918 1367 aa23.53■■□□□ 1.36
Trim47-202ENSMUST00000106441 Wdr17E9Q271 1322 aa23.52■■□□□ 1.36
Trim47-202ENSMUST00000106441 AampJ3QN89 436 aa23.51■■□□□ 1.35
Trim47-202ENSMUST00000106441 DaxxO35613 739 aa23.51■■□□□ 1.35
Trim47-202ENSMUST00000106441 Uspl1Q3ULM6 1089 aa23.51■■□□□ 1.35
Trim47-202ENSMUST00000106441 Dnai1Q8C0M8 701 aa23.51■■□□□ 1.35
Trim47-202ENSMUST00000106441 Pik3c2aQ61194 1686 aa23.5■■□□□ 1.35
Trim47-202ENSMUST00000106441 4933416C03RikQ3V063 378 aa23.5■■□□□ 1.35
Trim47-202ENSMUST00000106441 Frmpd2A0A140LI67 1392 aa23.49■■□□□ 1.35
Trim47-202ENSMUST00000106441 Mre11Q61216 706 aa23.49■■□□□ 1.35
Trim47-202ENSMUST00000106441 Kiaa1107Q80TK0 1369 aa23.49■■□□□ 1.35
Trim47-202ENSMUST00000106441 Map4k4P97820 1233 aaKnown RBP23.48■■□□□ 1.35
Trim47-202ENSMUST00000106441 Neurod2Q62414 383 aa23.48■■□□□ 1.35
Trim47-202ENSMUST00000106441 Plcd4Q8K3R3 807 aa23.48■■□□□ 1.35
Trim47-202ENSMUST00000106441 Astn2Q80Z10 1352 aa23.48■■□□□ 1.35
Trim47-202ENSMUST00000106441 Hspa1lP16627 641 aa23.48■■□□□ 1.35
Trim47-202ENSMUST00000106441 Slc35g1Q8BY79 368 aa23.48■■□□□ 1.35
Trim47-202ENSMUST00000106441 Dbr1Q923B1 550 aa23.48■■□□□ 1.35
Trim47-202ENSMUST00000106441 Fyb1O35601 819 aa23.47■■□□□ 1.35
Trim47-202ENSMUST00000106441 Tmc1Q8R4P5 757 aa23.47■■□□□ 1.35
Trim47-202ENSMUST00000106441 Apbb1Q9QXJ1 710 aa23.47■■□□□ 1.35
Trim47-202ENSMUST00000106441 IbtkQ6ZPR6 1352 aaKnown RBP23.47■■□□□ 1.35
Trim47-202ENSMUST00000106441 Gimap5Q8BWF2 308 aa23.47■■□□□ 1.35
Trim47-202ENSMUST00000106441 Ddx17Q501J6 650 aaKnown RBP23.46■■□□□ 1.35
Trim47-202ENSMUST00000106441 Col16a1Q8BLX7 1580 aa23.46■■□□□ 1.35
Trim47-202ENSMUST00000106441 Kif24Q6NWW5 1356 aa23.44■■□□□ 1.34
Trim47-202ENSMUST00000106441 Chd4Q6PDQ2 1915 aaKnown RBP23.44■■□□□ 1.34
Trim47-202ENSMUST00000106441 Sart3Q9JLI8 962 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms