RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C UBX2Q04228 584 aa9.87□□□□□ -0.83
SRP54YPR088C OPY1P38271 328 aa9.85□□□□□ -0.83
SRP54YPR088C STM1P39015 273 aaKnown RBP9.85□□□□□ -0.83
SRP54YPR088C GRX6Q12438 231 aa9.85□□□□□ -0.83
SRP54YPR088C KIN4Q01919 800 aa9.85□□□□□ -0.83
SRP54YPR088C IRC4Q03036 179 aa9.85□□□□□ -0.83
SRP54YPR088C FIG2P25653 1609 aa9.84□□□□□ -0.83
SRP54YPR088C RET1P22276 1149 aaKnown RBP9.84□□□□□ -0.83
SRP54YPR088C LCB1P25045 558 aaKnown RBP9.84□□□□□ -0.83
SRP54YPR088C OPI1P21957 404 aa9.83□□□□□ -0.84
SRP54YPR088C YER156CP40093 338 aaKnown RBP9.83□□□□□ -0.84
SRP54YPR088C PSF3Q12146 194 aa9.83□□□□□ -0.84
SRP54YPR088C FAS2P19097 1887 aaKnown RBP9.83□□□□□ -0.84
SRP54YPR088C INM2Q05533 292 aa9.82□□□□□ -0.84
SRP54YPR088C TPM1P17536 199 aaKnown RBP9.82□□□□□ -0.84
SRP54YPR088C YKU70P32807 602 aa9.82□□□□□ -0.84
SRP54YPR088C YMR147WP40218 223 aaKnown RBP9.82□□□□□ -0.84
SRP54YPR088C YIR042CP40586 236 aa9.82□□□□□ -0.84
SRP54YPR088C BBC1P47068 1157 aa9.82□□□□□ -0.84
SRP54YPR088C RLF2Q12495 606 aa9.82□□□□□ -0.84
SRP54YPR088C CYB2P00175 591 aa9.81□□□□□ -0.84
SRP54YPR088C ICL1P28240 557 aaPredicted RBP9.81□□□□□ -0.84
SRP54YPR088C NPL4P33755 580 aa9.81□□□□□ -0.84
SRP54YPR088C ENP2P48234 707 aaKnown RBP9.81□□□□□ -0.84
SRP54YPR088C PKH3Q03306 898 aaPredicted RBP9.81□□□□□ -0.84
SRP54YPR088C HKR1P41809 1802 aa9.81□□□□□ -0.84
SRP54YPR088C PCT1P13259 424 aa9.8□□□□□ -0.84
SRP54YPR088C GEF1P37020 779 aa9.8□□□□□ -0.84
SRP54YPR088C YFH7P43591 353 aa9.8□□□□□ -0.84
SRP54YPR088C KAR5Q04746 504 aa9.8□□□□□ -0.84
SRP54YPR088C LAM4P38800 1345 aa9.79□□□□□ -0.84
SRP54YPR088C TRL1P09880 827 aaKnown RBP9.79□□□□□ -0.84
SRP54YPR088C GRX7P38068 203 aa9.79□□□□□ -0.84
SRP54YPR088C TIF4632P39936 914 aaKnown RBP9.79□□□□□ -0.84
SRP54YPR088C SET4P42948 560 aa9.79□□□□□ -0.84
SRP54YPR088C JJJ2P46997 583 aa9.79□□□□□ -0.84
SRP54YPR088C TAH18Q12181 623 aa9.79□□□□□ -0.84
SRP54YPR088C RNR2P09938 399 aaKnown RBP9.78□□□□□ -0.84
SRP54YPR088C RPT3P33298 428 aaKnown RBP9.78□□□□□ -0.84
SRP54YPR088C WRS1Q12109 432 aaKnown RBP9.78□□□□□ -0.84
SRP54YPR088C RPS9BP05755 195 aaKnown RBP9.78□□□□□ -0.84
SRP54YPR088C PTK1P36002 662 aaPredicted RBP9.78□□□□□ -0.84
SRP54YPR088C IOC3P43596 787 aa9.78□□□□□ -0.84
SRP54YPR088C IRC8P47046 822 aa9.78□□□□□ -0.84
SRP54YPR088C TOS4Q06266 489 aa9.78□□□□□ -0.84
SRP54YPR088C SRS2P12954 1174 aa9.77□□□□□ -0.85
SRP54YPR088C IME2P32581 645 aa9.77□□□□□ -0.85
SRP54YPR088C MET1P36150 593 aa9.77□□□□□ -0.85
SRP54YPR088C BOI1P38041 980 aaKnown RBP9.77□□□□□ -0.85
SRP54YPR088C AIM9P40053 627 aaKnown RBP9.77□□□□□ -0.85
SRP54YPR088C SPO22P40511 975 aa9.77□□□□□ -0.85
SRP54YPR088C PRP42Q03776 544 aaKnown RBP9.77□□□□□ -0.85
SRP54YPR088C DPL1Q05567 589 aa9.77□□□□□ -0.85
SRP54YPR088C KRI1P42846 591 aaKnown RBP9.76□□□□□ -0.85
SRP54YPR088C GAS5Q08193 484 aa9.76□□□□□ -0.85
SRP54YPR088C SSF2Q12153 453 aaPredicted RBP9.76□□□□□ -0.85
SRP54YPR088C SHC1P39000 512 aa9.75□□□□□ -0.85
SRP54YPR088C GSM1P42950 618 aa9.75□□□□□ -0.85
SRP54YPR088C ARG82P07250 355 aa9.74□□□□□ -0.85
SRP54YPR088C MDL2P33311 773 aa9.74□□□□□ -0.85
SRP54YPR088C SKI2P35207 1287 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
SRP54YPR088C RRG1Q12167 365 aaPredicted RBP9.74□□□□□ -0.85
SRP54YPR088C DIP2Q12220 943 aaPredicted RBP9.74□□□□□ -0.85
SRP54YPR088C TOP1P04786 769 aa9.74□□□□□ -0.85
SRP54YPR088C SNF3P10870 884 aa9.74□□□□□ -0.85
SRP54YPR088C CIC1P38779 376 aaKnown RBP9.74□□□□□ -0.85
SRP54YPR088C PPM2Q08282 695 aa9.74□□□□□ -0.85
SRP54YPR088C ACK1Q07622 623 aaPredicted RBP9.72□□□□□ -0.85
SRP54YPR088C LSP1Q12230 341 aaKnown RBP9.72□□□□□ -0.85
SRP54YPR088C COQ1P18900 473 aa9.71□□□□□ -0.85
SRP54YPR088C PEP3P27801 918 aa9.71□□□□□ -0.85
SRP54YPR088C CRG1P38892 291 aaRIP-Chip data9.71□□□□□ -0.85not detected
SRP54YPR088C RRP8P38961 392 aaKnown RBP9.71□□□□□ -0.85
SRP54YPR088C APL6P46682 809 aa9.71□□□□□ -0.85
SRP54YPR088C PIP2P52960 996 aa9.71□□□□□ -0.85
SRP54YPR088C PUS6P53294 404 aa9.71□□□□□ -0.85
SRP54YPR088C PGA3Q12746 312 aaKnown RBP9.71□□□□□ -0.85
SRP54YPR088C IMP2'P32351 346 aa9.71□□□□□ -0.86
SRP54YPR088C VPS24P36095 224 aaKnown RBP9.71□□□□□ -0.86
SRP54YPR088C SLN1P39928 1220 aaPredicted RBP9.71□□□□□ -0.86
SRP54YPR088C SPN1Q06505 410 aaPredicted RBP9.71□□□□□ -0.86
SRP54YPR088C RPS7AP26786 190 aaKnown RBP9.7□□□□□ -0.86
SRP54YPR088C AFG2P32794 780 aa9.7□□□□□ -0.86
SRP54YPR088C VPS20Q04272 221 aa9.7□□□□□ -0.86
SRP54YPR088C ATG20Q07528 640 aa9.7□□□□□ -0.86
SRP54YPR088C MSM1P22438 575 aa9.69□□□□□ -0.86
SRP54YPR088C CRF1Q04930 467 aa9.69□□□□□ -0.86
SRP54YPR088C ESF1Q06344 628 aaKnown RBP9.69□□□□□ -0.86
SRP54YPR088C RTS1P38903 757 aa9.68□□□□□ -0.86
SRP54YPR088C NPA3P47122 385 aa9.68□□□□□ -0.86
SRP54YPR088C RPS15Q01855 142 aaKnown RBP9.68□□□□□ -0.86
SRP54YPR088C FLO11P08640 1367 aa9.68□□□□□ -0.86
SRP54YPR088C FLO1P32768 1537 aa9.68□□□□□ -0.86
SRP54YPR088C CHO2P05374 869 aaKnown RBP9.67□□□□□ -0.86
SRP54YPR088C RER2P35196 286 aa9.67□□□□□ -0.86
SRP54YPR088C VID28P40547 921 aa9.67□□□□□ -0.86
SRP54YPR088C FPK1P53739 893 aa9.67□□□□□ -0.86
SRP54YPR088C SQS1P53866 767 aaKnown RBP9.67□□□□□ -0.86
SRP54YPR088C EAF7P53911 425 aaKnown RBP9.67□□□□□ -0.86
SRP54YPR088C ARP5P53946 755 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 363.1 ms