RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A NTA1P40354 457 aa6.52□□□□□ -1.37
YNL054W-AYNL054W-A NNF1P47149 201 aa6.52□□□□□ -1.37
YNL054W-AYNL054W-A SAM37P50110 327 aa6.52□□□□□ -1.37
YNL054W-AYNL054W-A MSN5P52918 1224 aa6.52□□□□□ -1.37
YNL054W-AYNL054W-A MSN1P22148 382 aa6.51□□□□□ -1.37
YNL054W-AYNL054W-A NAP1P25293 417 aaKnown RBP6.51□□□□□ -1.37
YNL054W-AYNL054W-A QDR2P40474 542 aa6.51□□□□□ -1.37
YNL054W-AYNL054W-A JJJ2P46997 583 aa6.51□□□□□ -1.37
YNL054W-AYNL054W-A DYS1P38791 387 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A RAD55P38953 406 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A RPS26AP39938 119 aaKnown RBP6.5□□□□□ -1.37
YNL054W-AYNL054W-A RPS26BP39939 119 aaKnown RBP6.5□□□□□ -1.37
YNL054W-AYNL054W-A AAD14P42884 376 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A MSB3P48566 633 aaPredicted RBP6.5□□□□□ -1.37
YNL054W-AYNL054W-A YGR122WP53272 402 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A VPS16Q03308 798 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A RAS1P01119 309 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A HXK1P04806 485 aaKnown RBP6.5□□□□□ -1.37
YNL054W-AYNL054W-A CDC4P07834 779 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A CYC8P14922 966 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A SLA1P32790 1244 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A NOC3Q07896 663 aaPredicted RBP6.5□□□□□ -1.37
YNL054W-AYNL054W-A PIN2Q12057 282 aa6.5□□□□□ -1.37
YNL054W-AYNL054W-A TIF6Q12522 245 aaKnown RBP6.5□□□□□ -1.37
YNL054W-AYNL054W-A RPC31P17890 251 aa6.49□□□□□ -1.37
YNL054W-AYNL054W-A AFT1P22149 690 aa6.49□□□□□ -1.37
YNL054W-AYNL054W-A NAB2P32505 525 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
YNL054W-AYNL054W-A KAP122P32767 1081 aa6.49□□□□□ -1.37
YNL054W-AYNL054W-A IRS4P36115 615 aaKnown RBP6.49□□□□□ -1.37
YNL054W-AYNL054W-A CIC1P38779 376 aaKnown RBP6.49□□□□□ -1.37
YNL054W-AYNL054W-A ALA1P40825 983 aaKnown RBP6.49□□□□□ -1.37
YNL054W-AYNL054W-A ALD3P54114 506 aa6.49□□□□□ -1.37
YNL054W-AYNL054W-A BSC2Q05611 235 aa6.49□□□□□ -1.37
YNL054W-AYNL054W-A TY1A-DR3Q12441 440 aa6.49□□□□□ -1.37
YNL054W-AYNL054W-A ARG82P07250 355 aa6.48□□□□□ -1.37
YNL054W-AYNL054W-A PSY2P40164 858 aa6.48□□□□□ -1.37
YNL054W-AYNL054W-A ESF1Q06344 628 aaKnown RBP6.48□□□□□ -1.37
YNL054W-AYNL054W-A UGA3P26370 528 aa6.47□□□□□ -1.37
YNL054W-AYNL054W-A IRE1P32361 1115 aa6.47□□□□□ -1.37
YNL054W-AYNL054W-A ASH1P34233 588 aa6.47□□□□□ -1.37
YNL054W-AYNL054W-A FAA3P39002 694 aa6.47□□□□□ -1.37
YNL054W-AYNL054W-A AIR1P40507 360 aaKnown RBP6.47□□□□□ -1.37
YNL054W-AYNL054W-A ALD6P54115 500 aaKnown RBP6.47□□□□□ -1.37
YNL054W-AYNL054W-A FLP1P03870 423 aa6.46□□□□□ -1.38
YNL054W-AYNL054W-A LEU1P07264 779 aaKnown RBP6.46□□□□□ -1.38
YNL054W-AYNL054W-A RAD2P07276 1031 aa6.46□□□□□ -1.38
YNL054W-AYNL054W-A DAL1P32375 460 aa6.46□□□□□ -1.38
YNL054W-AYNL054W-A BSD2P38356 321 aa6.46□□□□□ -1.38
YNL054W-AYNL054W-A VTC4P47075 721 aa6.46□□□□□ -1.38
YNL054W-AYNL054W-A YOR296WQ08748 1289 aa6.46□□□□□ -1.38
YNL054W-AYNL054W-A OXR1Q08952 273 aa6.46□□□□□ -1.38
YNL054W-AYNL054W-A GIP1P38229 639 aa6.45□□□□□ -1.38
YNL054W-AYNL054W-A VAC8P39968 578 aa6.45□□□□□ -1.38
YNL054W-AYNL054W-A FIR1P40020 876 aa6.45□□□□□ -1.38
YNL054W-AYNL054W-A CTR9P89105 1077 aa6.45□□□□□ -1.38
YNL054W-AYNL054W-A PSH1Q12161 406 aa6.45□□□□□ -1.38
YNL054W-AYNL054W-A DPS1P04802 557 aaKnown RBP6.44□□□□□ -1.38
YNL054W-AYNL054W-A PDC6P26263 563 aaKnown RBP6.44□□□□□ -1.38
YNL054W-AYNL054W-A PEP7P32609 515 aa6.44□□□□□ -1.38
YNL054W-AYNL054W-A MNR2P35724 969 aa6.44□□□□□ -1.38
YNL054W-AYNL054W-A ISW1P38144 1129 aa6.44□□□□□ -1.38
YNL054W-AYNL054W-A YTA6P40328 754 aa6.44□□□□□ -1.38
YNL054W-AYNL054W-A MAD1P40957 749 aa6.44□□□□□ -1.38
YNL054W-AYNL054W-A PTK2P47116 818 aaKnown RBP6.44□□□□□ -1.38
YNL054W-AYNL054W-A YCS4Q06156 1176 aa6.44□□□□□ -1.38
YNL054W-AYNL054W-A FPR4Q06205 392 aaPredicted RBP6.44□□□□□ -1.38
YNL054W-AYNL054W-A INP54Q08227 384 aaKnown RBP6.44□□□□□ -1.38
YNL054W-AYNL054W-A COBP00163 385 aa6.43□□□□□ -1.38
YNL054W-AYNL054W-A CLN2P20438 545 aa6.43□□□□□ -1.38
YNL054W-AYNL054W-A RGA1P39083 1007 aa6.43□□□□□ -1.38
YNL054W-AYNL054W-A SKP1P52286 194 aa6.43□□□□□ -1.38
YNL054W-AYNL054W-A YOL098CQ12496 1037 aa6.43□□□□□ -1.38
YNL054W-AYNL054W-A PRP40P33203 583 aaKnown RBP6.42□□□□□ -1.38
YNL054W-AYNL054W-A AHP1P38013 176 aaKnown RBP6.42□□□□□ -1.38
YNL054W-AYNL054W-A MTO1P53070 669 aa6.42□□□□□ -1.38
YNL054W-AYNL054W-A HST3P53687 447 aa6.42□□□□□ -1.38
YNL054W-AYNL054W-A YPL109CQ02981 657 aa6.42□□□□□ -1.38
YNL054W-AYNL054W-A DAL4Q04895 635 aa6.42□□□□□ -1.38
YNL054W-AYNL054W-A EMG1Q06287 252 aaKnown RBP6.42□□□□□ -1.38
YNL054W-AYNL054W-A DLD1P32891 587 aa6.41□□□□□ -1.38
YNL054W-AYNL054W-A DUR3P33413 735 aa6.41□□□□□ -1.38
YNL054W-AYNL054W-A YJR098CP47139 656 aa6.41□□□□□ -1.38
YNL054W-AYNL054W-A MSH6Q03834 1242 aa6.41□□□□□ -1.38
YNL054W-AYNL054W-A SSF2Q12153 453 aaPredicted RBP6.41□□□□□ -1.38
YNL054W-AYNL054W-A PRE9P23638 258 aaKnown RBP6.4□□□□□ -1.39
YNL054W-AYNL054W-A PET112P33893 541 aa6.4□□□□□ -1.39
YNL054W-AYNL054W-A YHL008CP38750 627 aa6.4□□□□□ -1.39
YNL054W-AYNL054W-A AIM46P38885 310 aa6.4□□□□□ -1.39
YNL054W-AYNL054W-A NUP85P46673 744 aa6.4□□□□□ -1.39
YNL054W-AYNL054W-A YJR115WP47152 169 aa6.4□□□□□ -1.39
YNL054W-AYNL054W-A CUS1Q02554 436 aaPredicted RBP6.4□□□□□ -1.39
YNL054W-AYNL054W-A MCM5P29496 775 aaKnown RBP6.39□□□□□ -1.39
YNL054W-AYNL054W-A YBR287WP38355 427 aa6.39□□□□□ -1.39
YNL054W-AYNL054W-A MRPS18P42847 217 aa6.39□□□□□ -1.39
YNL054W-AYNL054W-A IOC3P43596 787 aa6.39□□□□□ -1.39
YNL054W-AYNL054W-A ITC1P53125 1264 aa6.39□□□□□ -1.39
YNL054W-AYNL054W-A MCD1Q12158 566 aa6.39□□□□□ -1.39
YNL054W-AYNL054W-A RGP1P16664 663 aa6.38□□□□□ -1.39
YNL054W-AYNL054W-A UGA4P32837 571 aa6.38□□□□□ -1.39
YNL054W-AYNL054W-A DUT1P33317 147 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 147.8 ms