RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W FPR4Q06205 392 aaPredicted RBP13□□□□□ -0.33
TRM5YHR070W PBY1P38254 753 aa12.99□□□□□ -0.33
TRM5YHR070W FAS2P19097 1887 aaKnown RBP12.99□□□□□ -0.33
TRM5YHR070W RET1P22276 1149 aaKnown RBP12.98□□□□□ -0.33
TRM5YHR070W LCB1P25045 558 aaKnown RBP12.98□□□□□ -0.33
TRM5YHR070W IRC4Q03036 179 aa12.98□□□□□ -0.33
TRM5YHR070W OSH3P38713 996 aaKnown RBP12.98□□□□□ -0.33
TRM5YHR070W STM1P39015 273 aaKnown RBP12.97□□□□□ -0.33
TRM5YHR070W HKR1P41809 1802 aa12.97□□□□□ -0.33
TRM5YHR070W YIR042CP40586 236 aa12.96□□□□□ -0.33
TRM5YHR070W UBX2Q04228 584 aa12.96□□□□□ -0.33
TRM5YHR070W INM2Q05533 292 aa12.96□□□□□ -0.33
TRM5YHR070W GRX6Q12438 231 aa12.96□□□□□ -0.33
TRM5YHR070W YMR147WP40218 223 aaKnown RBP12.95□□□□□ -0.34
TRM5YHR070W SET4P42948 560 aa12.95□□□□□ -0.34
TRM5YHR070W BBC1P47068 1157 aa12.95□□□□□ -0.34
TRM5YHR070W YER156CP40093 338 aaKnown RBP12.94□□□□□ -0.34
TRM5YHR070W PKH3Q03306 898 aaPredicted RBP12.94□□□□□ -0.34
TRM5YHR070W RLF2Q12495 606 aa12.94□□□□□ -0.34
TRM5YHR070W TRL1P09880 827 aaKnown RBP12.93□□□□□ -0.34
TRM5YHR070W OPI1P21957 404 aa12.93□□□□□ -0.34
TRM5YHR070W LAM4P38800 1345 aa12.93□□□□□ -0.34
TRM5YHR070W ICL1P28240 557 aaPredicted RBP12.93□□□□□ -0.34
TRM5YHR070W YKU70P32807 602 aa12.93□□□□□ -0.34
TRM5YHR070W TOS4Q06266 489 aa12.93□□□□□ -0.34
TRM5YHR070W PCT1P13259 424 aa12.92□□□□□ -0.34
TRM5YHR070W RPT3P33298 428 aaKnown RBP12.92□□□□□ -0.34
TRM5YHR070W GRX7P38068 203 aa12.92□□□□□ -0.34
TRM5YHR070W KAR5Q04746 504 aa12.92□□□□□ -0.34
TRM5YHR070W YFH7P43591 353 aa12.91□□□□□ -0.34
TRM5YHR070W CYB2P00175 591 aa12.9□□□□□ -0.34
TRM5YHR070W PSF3Q12146 194 aa12.9□□□□□ -0.34
TRM5YHR070W NPL4P33755 580 aa12.89□□□□□ -0.35
TRM5YHR070W AIM9P40053 627 aaKnown RBP12.89□□□□□ -0.35
TRM5YHR070W GAS5Q08193 484 aa12.89□□□□□ -0.35
TRM5YHR070W TAH18Q12181 623 aa12.89□□□□□ -0.35
TRM5YHR070W IME2P32581 645 aa12.88□□□□□ -0.35
TRM5YHR070W PTK1P36002 662 aaPredicted RBP12.88□□□□□ -0.35
TRM5YHR070W JJJ2P46997 583 aa12.88□□□□□ -0.35
TRM5YHR070W WRS1Q12109 432 aaKnown RBP12.88□□□□□ -0.35
TRM5YHR070W IRC8P47046 822 aa12.88□□□□□ -0.35
TRM5YHR070W DPL1Q05567 589 aa12.88□□□□□ -0.35
TRM5YHR070W RNR2P09938 399 aaKnown RBP12.87□□□□□ -0.35
TRM5YHR070W GEF1P37020 779 aa12.87□□□□□ -0.35
TRM5YHR070W GSM1P42950 618 aa12.87□□□□□ -0.35
TRM5YHR070W PRP42Q03776 544 aaKnown RBP12.87□□□□□ -0.35
TRM5YHR070W SRS2P12954 1174 aa12.86□□□□□ -0.35
TRM5YHR070W TPM1P17536 199 aaKnown RBP12.86□□□□□ -0.35
TRM5YHR070W BOI1P38041 980 aaKnown RBP12.86□□□□□ -0.35
TRM5YHR070W IOC3P43596 787 aa12.86□□□□□ -0.35
TRM5YHR070W ENP2P48234 707 aaKnown RBP12.86□□□□□ -0.35
TRM5YHR070W DIP2Q12220 943 aaPredicted RBP12.86□□□□□ -0.35
TRM5YHR070W SNF3P10870 884 aa12.85□□□□□ -0.35
TRM5YHR070W MET1P36150 593 aa12.85□□□□□ -0.35
TRM5YHR070W TIF4632P39936 914 aaKnown RBP12.85□□□□□ -0.35
TRM5YHR070W PPM2Q08282 695 aa12.85□□□□□ -0.35
TRM5YHR070W ARG82P07250 355 aa12.84□□□□□ -0.35
TRM5YHR070W CIC1P38779 376 aaKnown RBP12.84□□□□□ -0.35
TRM5YHR070W SHC1P39000 512 aa12.84□□□□□ -0.35
TRM5YHR070W SPO22P40511 975 aa12.84□□□□□ -0.35
TRM5YHR070W TOP1P04786 769 aa12.83□□□□□ -0.35
TRM5YHR070W KRI1P42846 591 aaKnown RBP12.83□□□□□ -0.35
TRM5YHR070W PGA3Q12746 312 aaKnown RBP12.83□□□□□ -0.35
TRM5YHR070W COQ1P18900 473 aa12.83□□□□□ -0.36
TRM5YHR070W MDL2P33311 773 aa12.83□□□□□ -0.36
TRM5YHR070W SSF2Q12153 453 aaPredicted RBP12.83□□□□□ -0.36
TRM5YHR070W SKI2P35207 1287 aaKnown RBP RIP-Chip data12.82□□□□□ -0.36not detected
TRM5YHR070W RRG1Q12167 365 aaPredicted RBP12.82□□□□□ -0.36
TRM5YHR070W RPS9BP05755 195 aaKnown RBP12.81□□□□□ -0.36
TRM5YHR070W FLO11P08640 1367 aa12.81□□□□□ -0.36
TRM5YHR070W FLO1P32768 1537 aa12.81□□□□□ -0.36
TRM5YHR070W RPS7AP26786 190 aaKnown RBP12.79□□□□□ -0.36
TRM5YHR070W PEP3P27801 918 aa12.79□□□□□ -0.36
TRM5YHR070W AFG2P32794 780 aa12.79□□□□□ -0.36
TRM5YHR070W NPA3P47122 385 aa12.79□□□□□ -0.36
TRM5YHR070W NSG2P53898 299 aa12.79□□□□□ -0.36
TRM5YHR070W VPS20Q04272 221 aa12.79□□□□□ -0.36
TRM5YHR070W CHO2P05374 869 aaKnown RBP12.78□□□□□ -0.36
TRM5YHR070W IMP2'P32351 346 aa12.78□□□□□ -0.36
TRM5YHR070W CRG1P38892 291 aaRIP-Chip data12.78□□□□□ -0.36not detected
TRM5YHR070W APL6P46682 809 aa12.78□□□□□ -0.36
TRM5YHR070W PUS6P53294 404 aa12.78□□□□□ -0.36
TRM5YHR070W LSP1Q12230 341 aaKnown RBP12.78□□□□□ -0.36
TRM5YHR070W PIP2P52960 996 aa12.78□□□□□ -0.36
TRM5YHR070W SPN1Q06505 410 aaPredicted RBP12.78□□□□□ -0.36
TRM5YHR070W ATG20Q07528 640 aa12.78□□□□□ -0.36
TRM5YHR070W ACK1Q07622 623 aaPredicted RBP12.78□□□□□ -0.36
TRM5YHR070W RRP8P38961 392 aaKnown RBP12.77□□□□□ -0.37
TRM5YHR070W VPS24P36095 224 aaKnown RBP12.76□□□□□ -0.37
TRM5YHR070W VID28P40547 921 aa12.76□□□□□ -0.37
TRM5YHR070W ECM23Q02710 187 aa12.76□□□□□ -0.37
TRM5YHR070W RER2P35196 286 aa12.75□□□□□ -0.37
TRM5YHR070W YHL050CP38721 697 aa12.75□□□□□ -0.37
TRM5YHR070W RTS1P38903 757 aa12.75□□□□□ -0.37
TRM5YHR070W SLN1P39928 1220 aaPredicted RBP12.75□□□□□ -0.37
TRM5YHR070W SQS1P53866 767 aaKnown RBP12.75□□□□□ -0.37
TRM5YHR070W RPS15Q01855 142 aaKnown RBP12.75□□□□□ -0.37
TRM5YHR070W TSR3Q12094 313 aaKnown RBP12.75□□□□□ -0.37
TRM5YHR070W MSM1P22438 575 aa12.74□□□□□ -0.37
TRM5YHR070W ESF1Q06344 628 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms