RNA–Protein interactions for RNA: YGR129W

SYF2, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SYF2, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYF2	YGR129W	ATG20	Q07528	640 aa		7.94	□□□□□ -1.14
SYF2	YGR129W	TY1A-BR	Q12217	440 aa		7.94	□□□□□ -1.14
SYF2	YGR129W	TY1A-NL2	Q12470	440 aa		7.94	□□□□□ -1.14
SYF2	YGR129W	TY1A-GR2	Q12485	440 aa		7.94	□□□□□ -1.14
SYF2	YGR129W	ERG12	P07277	443 aa		7.93	□□□□□ -1.14
SYF2	YGR129W	SMY1	P32364	656 aa	Known RBP	7.93	□□□□□ -1.14
SYF2	YGR129W	YBP2	P53169	641 aa		7.93	□□□□□ -1.14
SYF2	YGR129W	RPS9B	P05755	195 aa	Known RBP	7.92	□□□□□ -1.14
SYF2	YGR129W	PDI1	P17967	522 aa	Known RBP	7.91	□□□□□ -1.14
SYF2	YGR129W	ICL1	P28240	557 aa	Predicted RBP	7.91	□□□□□ -1.14
SYF2	YGR129W	RTG2	P32608	588 aa	Known RBP	7.91	□□□□□ -1.14
SYF2	YGR129W	SEC2	P17065	759 aa		7.9	□□□□□ -1.14
SYF2	YGR129W	SPT16	P32558	1035 aa	Known RBP	7.9	□□□□□ -1.14
SYF2	YGR129W	MAC1	P35192	417 aa		7.9	□□□□□ -1.14
SYF2	YGR129W	SHC1	P39000	512 aa		7.9	□□□□□ -1.14
SYF2	YGR129W	ORC1	P54784	914 aa	Predicted RBP	7.89	□□□□□ -1.15
SYF2	YGR129W	MAM3	Q12296	706 aa		7.89	□□□□□ -1.15
SYF2	YGR129W	SEC3	P33332	1336 aa	Known RBP	7.87	□□□□□ -1.15
SYF2	YGR129W	PSE1	P32337	1089 aa	Known RBP	7.87	□□□□□ -1.15
SYF2	YGR129W	YKU70	P32807	602 aa		7.87	□□□□□ -1.15
SYF2	YGR129W	CST6	P40535	587 aa		7.87	□□□□□ -1.15
SYF2	YGR129W	ERO1	Q03103	563 aa		7.87	□□□□□ -1.15
SYF2	YGR129W	FAS2	P19097	1887 aa	Known RBP	7.87	□□□□□ -1.15
SYF2	YGR129W	LPD1	P09624	499 aa	Known RBP	7.86	□□□□□ -1.15
SYF2	YGR129W	SCT1	P32784	759 aa		7.86	□□□□□ -1.15
SYF2	YGR129W	RRN7	P40992	514 aa		7.86	□□□□□ -1.15
SYF2	YGR129W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.86	□□□□□ -1.15	not detected
SYF2	YGR129W	AUS1	Q08409	1394 aa		7.85	□□□□□ -1.15
SYF2	YGR129W	KEX2	P13134	814 aa		7.85	□□□□□ -1.15
SYF2	YGR129W	GRX4	P32642	244 aa		7.85	□□□□□ -1.15
SYF2	YGR129W	YIL089W	P40500	205 aa		7.85	□□□□□ -1.15
SYF2	YGR129W	NUP145	P49687	1317 aa		7.84	□□□□□ -1.15
SYF2	YGR129W	TEA1	P47988	759 aa		7.84	□□□□□ -1.15
SYF2	YGR129W	TAP42	Q04372	366 aa		7.84	□□□□□ -1.15
SYF2	YGR129W	PAT1	P25644	796 aa	Known RBP	7.83	□□□□□ -1.16
SYF2	YGR129W	DSF2	P38213	736 aa		7.83	□□□□□ -1.16
SYF2	YGR129W	HIM1	Q06674	414 aa		7.83	□□□□□ -1.16
SYF2	YGR129W	IRC3	Q06683	689 aa		7.83	□□□□□ -1.16
SYF2	YGR129W	SRF1	Q12516	437 aa		7.83	□□□□□ -1.16
SYF2	YGR129W	MLP1	Q02455	1875 aa	Known RBP	7.82	□□□□□ -1.16
SYF2	YGR129W	ERF2	Q06551	359 aa		7.82	□□□□□ -1.16
SYF2	YGR129W	CAF20	P12962	161 aa	Known RBP	7.81	□□□□□ -1.16
SYF2	YGR129W	SIT4	P20604	311 aa		7.81	□□□□□ -1.16
SYF2	YGR129W	CLB5	P30283	435 aa		7.81	□□□□□ -1.16
SYF2	YGR129W	SER1	P33330	395 aa	Known RBP	7.81	□□□□□ -1.16
SYF2	YGR129W	RAT1	Q02792	1006 aa	Known RBP	7.81	□□□□□ -1.16
SYF2	YGR129W	BDF2	Q07442	638 aa		7.81	□□□□□ -1.16
SYF2	YGR129W	TIF6	Q12522	245 aa	Known RBP	7.81	□□□□□ -1.16
SYF2	YGR129W	HSP104	P31539	908 aa	Known RBP	7.8	□□□□□ -1.16
SYF2	YGR129W	AIR1	P40507	360 aa	Known RBP	7.8	□□□□□ -1.16
SYF2	YGR129W	PMD1	P32634	1753 aa		7.79	□□□□□ -1.16
SYF2	YGR129W	MSM1	P22438	575 aa		7.79	□□□□□ -1.16
SYF2	YGR129W	FET4	P40988	552 aa		7.79	□□□□□ -1.16
SYF2	YGR129W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.79	□□□□□ -1.16	not detected
SYF2	YGR129W	CLA4	P48562	842 aa		7.79	□□□□□ -1.16
SYF2	YGR129W	CTF4	Q01454	927 aa		7.79	□□□□□ -1.16
SYF2	YGR129W	RMT2	Q03305	412 aa		7.79	□□□□□ -1.16
SYF2	YGR129W	GRX6	Q12438	231 aa		7.79	□□□□□ -1.16
SYF2	YGR129W	GLC3	P32775	704 aa		7.78	□□□□□ -1.16
SYF2	YGR129W	YFR016C	P43597	1233 aa	Known RBP	7.78	□□□□□ -1.16
SYF2	YGR129W	DSD1	P53095	428 aa		7.78	□□□□□ -1.16
SYF2	YGR129W	MDG1	P53885	366 aa		7.78	□□□□□ -1.16
SYF2	YGR129W	PHM7	Q12252	991 aa		7.78	□□□□□ -1.16
SYF2	YGR129W	UTP10	P42945	1769 aa	Known RBP	7.77	□□□□□ -1.17
SYF2	YGR129W	SPB4	P25808	606 aa	Predicted RBP	7.77	□□□□□ -1.17
SYF2	YGR129W	PEA2	P40091	420 aa		7.77	□□□□□ -1.17
SYF2	YGR129W	BDP1	P46678	594 aa		7.77	□□□□□ -1.17
SYF2	YGR129W	DIB1	Q06819	143 aa	Predicted RBP	7.77	□□□□□ -1.17
SYF2	YGR129W	AIM7	Q12156	149 aa		7.77	□□□□□ -1.17
SYF2	YGR129W	TYW1	Q08960	810 aa	Known RBP	7.76	□□□□□ -1.17
SYF2	YGR129W	NUP42	P49686	430 aa	Known RBP	7.75	□□□□□ -1.17
SYF2	YGR129W	NCS6	P53088	359 aa		7.75	□□□□□ -1.17
SYF2	YGR129W	YGL082W	P53155	381 aa		7.75	□□□□□ -1.17
SYF2	YGR129W	TIM50	Q02776	476 aa		7.75	□□□□□ -1.17
SYF2	YGR129W	PAC1	P39946	494 aa	Known RBP	7.74	□□□□□ -1.17
SYF2	YGR129W	FIG2	P25653	1609 aa		7.74	□□□□□ -1.17
SYF2	YGR129W	CWC15	Q03772	175 aa	Known RBP	7.73	□□□□□ -1.17
SYF2	YGR129W	HVG1	P0CE11	249 aa		7.72	□□□□□ -1.17
SYF2	YGR129W	PAM1	P37304	830 aa	Known RBP	7.72	□□□□□ -1.17
SYF2	YGR129W	BRE2	P43132	505 aa		7.72	□□□□□ -1.17
SYF2	YGR129W	EMP47	P43555	445 aa		7.72	□□□□□ -1.17
SYF2	YGR129W	YGR117C	P53270	476 aa		7.72	□□□□□ -1.17
SYF2	YGR129W	BSD2	P38356	321 aa		7.71	□□□□□ -1.18
SYF2	YGR129W	TUB4	P53378	473 aa		7.71	□□□□□ -1.18
SYF2	YGR129W	FRD1	P32614	470 aa	Known RBP	7.7	□□□□□ -1.18
SYF2	YGR129W	RPN1	P38764	993 aa	Known RBP	7.7	□□□□□ -1.18
SYF2	YGR129W	TRM44	Q02648	567 aa	Known RBP	7.7	□□□□□ -1.18
SYF2	YGR129W	UBP16	Q02863	499 aa		7.7	□□□□□ -1.18
SYF2	YGR129W	AGE1	Q04412	482 aa		7.7	□□□□□ -1.18
SYF2	YGR129W	AOS1	Q06624	347 aa		7.7	□□□□□ -1.18
SYF2	YGR129W	ALE1	Q08548	619 aa		7.7	□□□□□ -1.18
SYF2	YGR129W	CDC4	P07834	779 aa		7.69	□□□□□ -1.18
SYF2	YGR129W	DIT2	P21595	489 aa		7.69	□□□□□ -1.18
SYF2	YGR129W	YNL115C	P53925	644 aa		7.69	□□□□□ -1.18
SYF2	YGR129W	KAR2	P16474	682 aa	Known RBP	7.68	□□□□□ -1.18
SYF2	YGR129W	KCC4	P25389	1037 aa		7.68	□□□□□ -1.18
SYF2	YGR129W	AKL1	P38080	1108 aa	Known RBP	7.68	□□□□□ -1.18
SYF2	YGR129W	NIS1	P53939	407 aa		7.68	□□□□□ -1.18
SYF2	YGR129W	SYF1	Q04048	859 aa	Predicted RBP	7.68	□□□□□ -1.18
SYF2	YGR129W	SSP2	Q08646	371 aa		7.68	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms