RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W YBL086CP38177 466 aa6.65□□□□□ -1.34
RPN12YFR052W KAR2P16474 682 aaKnown RBP6.64□□□□□ -1.35
RPN12YFR052W GRX4P32642 244 aa6.64□□□□□ -1.35
RPN12YFR052W PRP40P33203 583 aaKnown RBP6.64□□□□□ -1.35
RPN12YFR052W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
RPN12YFR052W YNL115CP53925 644 aa6.64□□□□□ -1.35
RPN12YFR052W LCB5Q06147 687 aaKnown RBP6.64□□□□□ -1.35
RPN12YFR052W EDE1P34216 1381 aa6.63□□□□□ -1.35
RPN12YFR052W RPO41P13433 1351 aaKnown RBP6.62□□□□□ -1.35
RPN12YFR052W TPD3P31383 635 aa6.62□□□□□ -1.35
RPN12YFR052W DSF2P38213 736 aa6.62□□□□□ -1.35
RPN12YFR052W MAM3Q12296 706 aa6.62□□□□□ -1.35
RPN12YFR052W CTH1P47976 325 aa6.61□□□□□ -1.35
RPN12YFR052W HST3P53687 447 aa6.61□□□□□ -1.35
RPN12YFR052W MEC3Q02574 474 aa6.61□□□□□ -1.35
RPN12YFR052W RRD1P40454 393 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W NUP42P49686 430 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W PAP2P53632 584 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W INP54Q08227 384 aaKnown RBP6.6□□□□□ -1.35
RPN12YFR052W SSA2P10592 639 aaKnown RBP6.59□□□□□ -1.35
RPN12YFR052W YJR115WP47152 169 aa6.59□□□□□ -1.35
RPN12YFR052W ATG13Q06628 738 aa6.59□□□□□ -1.35
RPN12YFR052W HSP104P31539 908 aaKnown RBP6.58□□□□□ -1.36
RPN12YFR052W ALD2P47771 506 aa6.58□□□□□ -1.36
RPN12YFR052W NIS1P53939 407 aa6.58□□□□□ -1.36
RPN12YFR052W NUP145P49687 1317 aa6.57□□□□□ -1.36
RPN12YFR052W OSM1P21375 501 aaKnown RBP6.57□□□□□ -1.36
RPN12YFR052W UGA2P38067 497 aa6.57□□□□□ -1.36
RPN12YFR052W DSD1P53095 428 aa6.57□□□□□ -1.36
RPN12YFR052W AKL1P38080 1108 aaKnown RBP6.56□□□□□ -1.36
RPN12YFR052W HXT10P43581 546 aa6.56□□□□□ -1.36
RPN12YFR052W TEA1P47988 759 aa6.56□□□□□ -1.36
RPN12YFR052W RRP46P53256 223 aaPredicted RBP6.56□□□□□ -1.36
RPN12YFR052W PMD1P32634 1753 aa6.56□□□□□ -1.36
RPN12YFR052W PDC1P06169 563 aaKnown RBP6.55□□□□□ -1.36
RPN12YFR052W SPT7P35177 1332 aa6.54□□□□□ -1.36
RPN12YFR052W KXD1P53158 218 aa6.54□□□□□ -1.36
RPN12YFR052W YBP2P53169 641 aa6.53□□□□□ -1.36
RPN12YFR052W SPB4P25808 606 aaPredicted RBP6.52□□□□□ -1.37
RPN12YFR052W FAS2P19097 1887 aaKnown RBP6.51□□□□□ -1.37
RPN12YFR052W GRX1P25373 110 aaKnown RBP6.51□□□□□ -1.37
RPN12YFR052W NTH2P35172 780 aa6.51□□□□□ -1.37
RPN12YFR052W SYH1Q02875 849 aaKnown RBP6.51□□□□□ -1.37
RPN12YFR052W RAD4P14736 754 aa6.5□□□□□ -1.37
RPN12YFR052W DIT2P21595 489 aa6.5□□□□□ -1.37
RPN12YFR052W FPK1P53739 893 aa6.5□□□□□ -1.37
RPN12YFR052W ALD3P54114 506 aa6.5□□□□□ -1.37
RPN12YFR052W CTF4Q01454 927 aa6.5□□□□□ -1.37
RPN12YFR052W AOS1Q06624 347 aa6.5□□□□□ -1.37
RPN12YFR052W ALE1Q08548 619 aa6.5□□□□□ -1.37
RPN12YFR052W BUG1Q12191 341 aa6.5□□□□□ -1.37
RPN12YFR052W RTR1P40084 226 aaPredicted RBP6.49□□□□□ -1.37
RPN12YFR052W KCC4P25389 1037 aa6.48□□□□□ -1.37
RPN12YFR052W ACO2P39533 789 aa6.48□□□□□ -1.37
RPN12YFR052W RIX7Q07844 837 aaKnown RBP6.48□□□□□ -1.37
RPN12YFR052W SLY41P22215 453 aa6.47□□□□□ -1.37
RPN12YFR052W TOS1P38288 455 aa6.47□□□□□ -1.37
RPN12YFR052W BUD27P43573 796 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RPN12YFR052W MPP10P47083 593 aaKnown RBP6.47□□□□□ -1.37
RPN12YFR052W EAF6P47128 113 aa6.47□□□□□ -1.37
RPN12YFR052W RPA14P50106 137 aa6.47□□□□□ -1.37
RPN12YFR052W HPC2Q01448 625 aa6.47□□□□□ -1.37
RPN12YFR052W RMT2Q03305 412 aa6.47□□□□□ -1.37
RPN12YFR052W PRD1P25375 712 aa6.46□□□□□ -1.38
RPN12YFR052W MRT4P33201 236 aaKnown RBP6.46□□□□□ -1.38
RPN12YFR052W YPR097WQ06839 1073 aa6.46□□□□□ -1.38
RPN12YFR052W YBR287WP38355 427 aa6.45□□□□□ -1.38
RPN12YFR052W PTK2P47116 818 aaKnown RBP6.45□□□□□ -1.38
RPN12YFR052W UTP22P53254 1237 aaPredicted RBP6.45□□□□□ -1.38
RPN12YFR052W CTI6Q08923 506 aa6.45□□□□□ -1.38
RPN12YFR052W NYV1Q12255 253 aa6.45□□□□□ -1.38
RPN12YFR052W HKR1P41809 1802 aa6.45□□□□□ -1.38
RPN12YFR052W PUS6P53294 404 aa6.44□□□□□ -1.38
RPN12YFR052W YNL050CP53952 270 aa6.44□□□□□ -1.38
RPN12YFR052W THI22Q06490 572 aa6.44□□□□□ -1.38
RPN12YFR052W OPT2Q06593 877 aa6.44□□□□□ -1.38
RPN12YFR052W ALR1Q08269 859 aa6.44□□□□□ -1.38
RPN12YFR052W YDL206WQ12424 762 aa6.44□□□□□ -1.38
RPN12YFR052W UGA3P26370 528 aa6.43□□□□□ -1.38
RPN12YFR052W SER1P33330 395 aaKnown RBP6.43□□□□□ -1.38
RPN12YFR052W MSN5P52918 1224 aa6.43□□□□□ -1.38
RPN12YFR052W YGL082WP53155 381 aa6.43□□□□□ -1.38
RPN12YFR052W CAF120P53836 1060 aa6.43□□□□□ -1.38
RPN12YFR052W RTT109Q07794 436 aa6.43□□□□□ -1.38
RPN12YFR052W SSA1P10591 642 aaKnown RBP6.42□□□□□ -1.38
RPN12YFR052W APL2P36000 726 aaPredicted RBP6.42□□□□□ -1.38
RPN12YFR052W ZDS2P54786 942 aa6.42□□□□□ -1.38
RPN12YFR052W YDL144CQ07589 356 aa6.42□□□□□ -1.38
RPN12YFR052W DUR1,2P32528 1835 aaKnown RBP6.41□□□□□ -1.38
RPN12YFR052W COQ4O13525 335 aa6.41□□□□□ -1.38
RPN12YFR052W SCJ1P25303 377 aa6.41□□□□□ -1.38
RPN12YFR052W RRT14P40470 206 aa6.41□□□□□ -1.38
RPN12YFR052W SAP155P43612 1002 aa6.41□□□□□ -1.38
RPN12YFR052W ZDS1P50111 915 aaKnown RBP6.41□□□□□ -1.38
RPN12YFR052W HST2P53686 357 aa6.41□□□□□ -1.38
RPN12YFR052W NSE3Q05541 303 aa6.41□□□□□ -1.38
RPN12YFR052W TRM1P15565 570 aaKnown RBP6.4□□□□□ -1.38
RPN12YFR052W ARG8P18544 423 aa6.4□□□□□ -1.38
RPN12YFR052W GLY1P37303 387 aaKnown RBP6.4□□□□□ -1.38
RPN12YFR052W YFR016CP43597 1233 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms