RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeastyeast

Gene SKP1, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKP1YDR328C KTR1P27810 393 aaKnown RBP8.66□□□□□ -1.02
SKP1YDR328C ICL1P28240 557 aaPredicted RBP8.66□□□□□ -1.02
SKP1YDR328C YKU70P32807 602 aa8.66□□□□□ -1.02
SKP1YDR328C YIR014WP40570 242 aa8.66□□□□□ -1.02
SKP1YDR328C SET4P42948 560 aa8.66□□□□□ -1.02
SKP1YDR328C DLD1P32891 587 aa8.65□□□□□ -1.02
SKP1YDR328C AAP1P37898 856 aaKnown RBP8.65□□□□□ -1.02
SKP1YDR328C RIM20Q12033 661 aa8.65□□□□□ -1.02
SKP1YDR328C OSH3P38713 996 aaKnown RBP8.64□□□□□ -1.03
SKP1YDR328C RPS9BP05755 195 aaKnown RBP8.63□□□□□ -1.03
SKP1YDR328C HXT13P39924 564 aa8.63□□□□□ -1.03
SKP1YDR328C HXT17P53631 564 aa8.63□□□□□ -1.03
SKP1YDR328C INM2Q05533 292 aa8.63□□□□□ -1.03
SKP1YDR328C DPL1Q05567 589 aa8.63□□□□□ -1.03
SKP1YDR328C PSF3Q12146 194 aa8.63□□□□□ -1.03
SKP1YDR328C PBY1P38254 753 aa8.62□□□□□ -1.03
SKP1YDR328C SHC1P39000 512 aa8.62□□□□□ -1.03
SKP1YDR328C YIR042CP40586 236 aa8.62□□□□□ -1.03
SKP1YDR328C YFH7P43591 353 aa8.62□□□□□ -1.03
SKP1YDR328C BBC1P47068 1157 aa8.62□□□□□ -1.03
SKP1YDR328C PKH3Q03306 898 aaPredicted RBP8.62□□□□□ -1.03
SKP1YDR328C TOS4Q06266 489 aa8.62□□□□□ -1.03
SKP1YDR328C GAS5Q08193 484 aa8.62□□□□□ -1.03
SKP1YDR328C WRS1Q12109 432 aaKnown RBP8.62□□□□□ -1.03
SKP1YDR328C DIP2Q12220 943 aaPredicted RBP8.62□□□□□ -1.03
SKP1YDR328C CYB2P00175 591 aa8.61□□□□□ -1.03
SKP1YDR328C OPI1P21957 404 aa8.61□□□□□ -1.03
SKP1YDR328C NPL4P33755 580 aa8.61□□□□□ -1.03
SKP1YDR328C STM1P39015 273 aaKnown RBP8.61□□□□□ -1.03
SKP1YDR328C KAR5Q04746 504 aa8.61□□□□□ -1.03
SKP1YDR328C FPR4Q06205 392 aaPredicted RBP8.61□□□□□ -1.03
SKP1YDR328C LAM4P38800 1345 aa8.6□□□□□ -1.03
SKP1YDR328C RPT3P33298 428 aaKnown RBP8.6□□□□□ -1.03
SKP1YDR328C GEF1P37020 779 aa8.6□□□□□ -1.03
SKP1YDR328C GRX7P38068 203 aa8.6□□□□□ -1.03
SKP1YDR328C TIF4632P39936 914 aaKnown RBP8.6□□□□□ -1.03
SKP1YDR328C YMR147WP40218 223 aaKnown RBP8.6□□□□□ -1.03
SKP1YDR328C JJJ2P46997 583 aa8.6□□□□□ -1.03
SKP1YDR328C PRP42Q03776 544 aaKnown RBP8.6□□□□□ -1.03
SKP1YDR328C TOP1P04786 769 aa8.59□□□□□ -1.03
SKP1YDR328C ARG82P07250 355 aa8.59□□□□□ -1.03
SKP1YDR328C SSA1P10591 642 aaKnown RBP8.59□□□□□ -1.03
SKP1YDR328C SNF3P10870 884 aa8.59□□□□□ -1.03
SKP1YDR328C PTK1P36002 662 aaPredicted RBP8.59□□□□□ -1.03
SKP1YDR328C GSC2P40989 1895 aa8.59□□□□□ -1.03
SKP1YDR328C GSM1P42950 618 aa8.58□□□□□ -1.04
SKP1YDR328C ATG20Q07528 640 aa8.58□□□□□ -1.04
SKP1YDR328C TAH18Q12181 623 aa8.58□□□□□ -1.04
SKP1YDR328C BOI1P38041 980 aaKnown RBP8.57□□□□□ -1.04
SKP1YDR328C OPY1P38271 328 aa8.57□□□□□ -1.04
SKP1YDR328C IOC3P43596 787 aa8.57□□□□□ -1.04
SKP1YDR328C FPK1P53739 893 aa8.57□□□□□ -1.04
SKP1YDR328C RRG1Q12167 365 aaPredicted RBP8.57□□□□□ -1.04
SKP1YDR328C FLO1P32768 1537 aa8.57□□□□□ -1.04
SKP1YDR328C FLO11P08640 1367 aa8.57□□□□□ -1.04
SKP1YDR328C TRL1P09880 827 aaKnown RBP8.56□□□□□ -1.04
SKP1YDR328C IRC8P47046 822 aa8.56□□□□□ -1.04
SKP1YDR328C AFG2P32794 780 aa8.55□□□□□ -1.04
SKP1YDR328C AIM9P40053 627 aaKnown RBP8.55□□□□□ -1.04
SKP1YDR328C SQS1P53866 767 aaKnown RBP8.55□□□□□ -1.04
SKP1YDR328C ACK1Q07622 623 aaPredicted RBP8.55□□□□□ -1.04
SKP1YDR328C PPM2Q08282 695 aa8.55□□□□□ -1.04
SKP1YDR328C TPM1P17536 199 aaKnown RBP8.54□□□□□ -1.04
SKP1YDR328C RPS7AP26786 190 aaKnown RBP8.54□□□□□ -1.04
SKP1YDR328C MDL2P33311 773 aa8.54□□□□□ -1.04
SKP1YDR328C MET1P36150 593 aa8.54□□□□□ -1.04
SKP1YDR328C ENP2P48234 707 aaKnown RBP8.54□□□□□ -1.04
SKP1YDR328C COQ1P18900 473 aa8.53□□□□□ -1.04
SKP1YDR328C MSM1P22438 575 aa8.53□□□□□ -1.04
SKP1YDR328C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
SKP1YDR328C SPO22P40511 975 aa8.53□□□□□ -1.04
SKP1YDR328C APL6P46682 809 aa8.53□□□□□ -1.04
SKP1YDR328C YJL171CP46992 396 aa8.53□□□□□ -1.04
SKP1YDR328C PUS6P53294 404 aa8.53□□□□□ -1.04
SKP1YDR328C CRF1Q04930 467 aa8.53□□□□□ -1.04
SKP1YDR328C SSF2Q12153 453 aaPredicted RBP8.53□□□□□ -1.04
SKP1YDR328C RLF2Q12495 606 aa8.53□□□□□ -1.04
SKP1YDR328C PCT1P13259 424 aa8.52□□□□□ -1.05
SKP1YDR328C NSG2P53898 299 aa8.52□□□□□ -1.05
SKP1YDR328C RNR2P09938 399 aaKnown RBP8.51□□□□□ -1.05
SKP1YDR328C GLC3P32775 704 aa8.51□□□□□ -1.05
SKP1YDR328C CIC1P38779 376 aaKnown RBP8.51□□□□□ -1.05
SKP1YDR328C CRG1P38892 291 aaRIP-Chip data8.51□□□□□ -1.05not detected
SKP1YDR328C UTP7P40055 554 aaKnown RBP8.51□□□□□ -1.05
SKP1YDR328C PIP2P52960 996 aa8.51□□□□□ -1.05
SKP1YDR328C GAP1P19145 602 aaPredicted RBP8.5□□□□□ -1.05
SKP1YDR328C PEP3P27801 918 aa8.5□□□□□ -1.05
SKP1YDR328C RTS1P38903 757 aa8.5□□□□□ -1.05
SKP1YDR328C MTC3P53077 123 aa8.5□□□□□ -1.05
SKP1YDR328C SPN1Q06505 410 aaPredicted RBP8.5□□□□□ -1.05
SKP1YDR328C PGA3Q12746 312 aaKnown RBP8.5□□□□□ -1.05
SKP1YDR328C YLR278CQ05854 1341 aa8.5□□□□□ -1.05
SKP1YDR328C CHO2P05374 869 aaKnown RBP8.49□□□□□ -1.05
SKP1YDR328C SRS2P12954 1174 aa8.49□□□□□ -1.05
SKP1YDR328C STV1P37296 890 aa8.49□□□□□ -1.05
SKP1YDR328C SLI15P38283 698 aa8.49□□□□□ -1.05
SKP1YDR328C YHL050CP38721 697 aa8.49□□□□□ -1.05
SKP1YDR328C YGR117CP53270 476 aa8.49□□□□□ -1.05
SKP1YDR328C RPS15Q01855 142 aaKnown RBP8.49□□□□□ -1.05
SKP1YDR328C TRM44Q02648 567 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms