RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	UBP1	P25037	809 aa		5.81	□□□□□ -1.48
DBF4	YDR052C	CDC48	P25694	835 aa	Known RBP	5.81	□□□□□ -1.48
DBF4	YDR052C	CSE1	P33307	960 aa		5.81	□□□□□ -1.48
DBF4	YDR052C	SDH5	Q08230	162 aa		5.81	□□□□□ -1.48
DBF4	YDR052C	SEC23	P15303	768 aa	Known RBP	5.8	□□□□□ -1.48
DBF4	YDR052C	TPD3	P31383	635 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	EFB1	P32471	206 aa	Known RBP	5.8	□□□□□ -1.48
DBF4	YDR052C	TRL1	P09880	827 aa	Known RBP	5.8	□□□□□ -1.48
DBF4	YDR052C	BIK1	P11709	440 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	PRP16	P15938	1071 aa	Predicted RBP	5.8	□□□□□ -1.48
DBF4	YDR052C	SPE2	P21182	396 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	FAR1	P21268	830 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	DAL7	P21826	554 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	NPL4	P33755	580 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	YLF2	P38746	405 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	HYR1	P40581	163 aa	Known RBP	5.8	□□□□□ -1.48
DBF4	YDR052C	SAP155	P43612	1002 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	CTH1	P47976	325 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	SEC5	P89102	971 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	BET4	Q00618	327 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	PKH1	Q03407	766 aa		5.8	□□□□□ -1.48
DBF4	YDR052C	VPS35	P34110	944 aa		5.79	□□□□□ -1.48
DBF4	YDR052C	ECM4	P36156	370 aa		5.79	□□□□□ -1.48
DBF4	YDR052C	VID28	P40547	921 aa		5.79	□□□□□ -1.48
DBF4	YDR052C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
DBF4	YDR052C	BTN2	P53286	410 aa		5.79	□□□□□ -1.48
DBF4	YDR052C	YNL247W	P53852	767 aa	Known RBP	5.79	□□□□□ -1.48
DBF4	YDR052C	RSA3	Q05942	220 aa	Known RBP	5.79	□□□□□ -1.48
DBF4	YDR052C	SFH1	Q06168	426 aa		5.79	□□□□□ -1.48
DBF4	YDR052C	OMS1	Q06668	471 aa		5.79	□□□□□ -1.48
DBF4	YDR052C	CHS5	Q12114	671 aa	Known RBP	5.79	□□□□□ -1.48
DBF4	YDR052C	SAC3	P46674	1301 aa		5.79	□□□□□ -1.48
DBF4	YDR052C	YEF3	P16521	1044 aa	Known RBP	5.78	□□□□□ -1.48
DBF4	YDR052C	SWC3	P31376	625 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	MET4	P32389	672 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	SEC6	P32844	805 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	PET112	P33893	541 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	LHS1	P36016	881 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	RPC37	P36121	282 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	EFM2	P38347	419 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	BRL1	P38770	471 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	SPT8	P38915	602 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	PET100	P38958	111 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	ILV3	P39522	585 aa	Known RBP	5.78	□□□□□ -1.48
DBF4	YDR052C	SYH1	Q02875	849 aa	Known RBP	5.78	□□□□□ -1.48
DBF4	YDR052C	FMP30	Q02883	468 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	DPL1	Q05567	589 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	MRD1	Q06106	887 aa	Known RBP	5.78	□□□□□ -1.48
DBF4	YDR052C	MMR1	Q06324	491 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	ATG9	Q12142	997 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	APC2	Q12440	853 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	ATE1	P16639	503 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	KDX1	P36005	433 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	UBP13	P38187	747 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	ASI1	P54074	624 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	MSH6	Q03834	1242 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	MET7	Q08645	548 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	TY4A-H	Q6Q5P6	413 aa		5.78	□□□□□ -1.48
DBF4	YDR052C	TTI1	P36097	1038 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	SRL3	P36167	246 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	ATG36	P46983	293 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	DSL1	P53847	754 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	TFB4	Q12004	338 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	BRR1	Q99177	341 aa	Predicted RBP	5.77	□□□□□ -1.49
DBF4	YDR052C	CDC25	P04821	1589 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	PMR1	P13586	950 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	CLB4	P24871	460 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	CPS1	P27614	576 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	OSH3	P38713	996 aa	Known RBP	5.77	□□□□□ -1.49
DBF4	YDR052C	SEC27	P41811	889 aa	Known RBP	5.77	□□□□□ -1.49
DBF4	YDR052C	OSW7	P43611	510 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	GYP7	P48365	746 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	HEH2	Q03281	663 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	YPR172W	Q06608	200 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	TRS33	Q99394	268 aa		5.77	□□□□□ -1.49
DBF4	YDR052C	YBT1	P32386	1661 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
DBF4	YDR052C	BUD14	P27637	709 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	PDB1	P32473	366 aa	Known RBP	5.76	□□□□□ -1.49
DBF4	YDR052C	ECM32	P32644	1121 aa	Known RBP	5.76	□□□□□ -1.49
DBF4	YDR052C	YKR018C	P36114	725 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	ATG14	P38270	344 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	HXT13	P39924	564 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	BNI4	P53858	892 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	GCR2	Q01722	534 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	PLP1	Q04004	230 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	YKU80	Q04437	629 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	TSR1	Q07381	788 aa	Known RBP	5.76	□□□□□ -1.49
DBF4	YDR052C	NOC3	Q07896	663 aa	Predicted RBP	5.76	□□□□□ -1.49
DBF4	YDR052C	ABP140	Q08641	628 aa	Known RBP	5.76	□□□□□ -1.49
DBF4	YDR052C	YOR223W	Q12015	292 aa		5.76	□□□□□ -1.49
DBF4	YDR052C	RUD3	Q12234	484 aa	Known RBP	5.76	□□□□□ -1.49
DBF4	YDR052C	PRT1	P06103	763 aa	Known RBP	5.75	□□□□□ -1.49
DBF4	YDR052C	PDR1	P12383	1068 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	RTG3	P38165	486 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	NUP60	P39705	539 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	IES2	P40154	320 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	AIM21	P40563	679 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	RBA50	Q04418	439 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	YMR111C	Q04461	462 aa	Predicted RBP	5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms