RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 ZNF326Q5BKZ1 582 aaKnown RBP11.81□□□□□ -0.52
RAB11A-209ENST00000569896 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
RAB11A-209ENST00000569896 PCDHB8Q9UN66 801 aa11.81□□□□□ -0.52
RAB11A-209ENST00000569896 EID1Q9Y6B2 187 aa11.81□□□□□ -0.52
RAB11A-209ENST00000569896 CCDC144AA2RUR9 1427 aa11.81□□□□□ -0.52
RAB11A-209ENST00000569896 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
RAB11A-209ENST00000569896 TXNDC2Q86VQ3 553 aa11.8□□□□□ -0.52
RAB11A-209ENST00000569896 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
RAB11A-209ENST00000569896 BCANQ96GW7 911 aa11.79□□□□□ -0.52
RAB11A-209ENST00000569896 TMEM2Q9UHN6 1383 aa11.79□□□□□ -0.52
RAB11A-209ENST00000569896 IQGAP1P46940 1657 aa11.79□□□□□ -0.52
RAB11A-209ENST00000569896 PPP1R15AO75807 674 aaPredicted RBP11.79□□□□□ -0.52
RAB11A-209ENST00000569896 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
RAB11A-209ENST00000569896 SLIT1O75093 1534 aa11.78□□□□□ -0.52
RAB11A-209ENST00000569896 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
RAB11A-209ENST00000569896 SCAF11Q99590 1463 aaKnown RBP11.77□□□□□ -0.52
RAB11A-209ENST00000569896 LTKP29376 864 aa11.77□□□□□ -0.53
RAB11A-209ENST00000569896 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.53
RAB11A-209ENST00000569896 RIMS2Q9UQ26 1411 aa11.76□□□□□ -0.53
RAB11A-209ENST00000569896 NEURL4Q96JN8 1562 aa11.76□□□□□ -0.53
RAB11A-209ENST00000569896 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
RAB11A-209ENST00000569896 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.76□□□□□ -0.53
RAB11A-209ENST00000569896 NPHP4O75161 1426 aaPredicted RBP11.76□□□□□ -0.53
RAB11A-209ENST00000569896 PPLO60437 1756 aa11.76□□□□□ -0.53
RAB11A-209ENST00000569896 SEC24BO95487 1268 aa11.75□□□□□ -0.53
RAB11A-209ENST00000569896 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
RAB11A-209ENST00000569896 MED14O60244 1454 aa11.73□□□□□ -0.53
RAB11A-209ENST00000569896 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
RAB11A-209ENST00000569896 IER5LQ5T953 404 aa11.73□□□□□ -0.53
RAB11A-209ENST00000569896 ZFYVE9O95405 1425 aa11.72□□□□□ -0.53
RAB11A-209ENST00000569896 IFT172Q9UG01 1749 aa11.72□□□□□ -0.53
RAB11A-209ENST00000569896 RPGRIP1LQ68CZ1 1315 aa11.72□□□□□ -0.53
RAB11A-209ENST00000569896 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.53
RAB11A-209ENST00000569896 DHX57Q6P158 1386 aaKnown RBP11.71□□□□□ -0.53
RAB11A-209ENST00000569896 NEXMIFQ5QGS0 1516 aa11.71□□□□□ -0.54
RAB11A-209ENST00000569896 SLC26A8Q96RN1 970 aa11.7□□□□□ -0.54
RAB11A-209ENST00000569896 SPATA31E1Q6ZUB1 1445 aa11.7□□□□□ -0.54
RAB11A-209ENST00000569896 PLEKHG1Q9ULL1 1385 aa11.69□□□□□ -0.54
RAB11A-209ENST00000569896 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
RAB11A-209ENST00000569896 CHD2O14647 1828 aaKnown RBP11.68□□□□□ -0.54
RAB11A-209ENST00000569896 SIN3AQ96ST3 1273 aa11.67□□□□□ -0.54
RAB11A-209ENST00000569896 ZNF335Q9H4Z2 1342 aaPredicted RBP11.67□□□□□ -0.54
RAB11A-209ENST00000569896 STRCP1A6NGW2 1772 aa11.67□□□□□ -0.54
RAB11A-209ENST00000569896 PSEN1P49768 467 aa11.67□□□□□ -0.54
RAB11A-209ENST00000569896 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
RAB11A-209ENST00000569896 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
RAB11A-209ENST00000569896 DCAF11Q8TEB1 546 aa11.67□□□□□ -0.54
RAB11A-209ENST00000569896 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
RAB11A-209ENST00000569896 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
RAB11A-209ENST00000569896 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
RAB11A-209ENST00000569896 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
RAB11A-209ENST00000569896 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
RAB11A-209ENST00000569896 DIP2AQ14689 1571 aa11.65□□□□□ -0.54
RAB11A-209ENST00000569896 NRXN3Q9Y4C0 1643 aa11.65□□□□□ -0.54
RAB11A-209ENST00000569896 POTEFA5A3E0 1075 aa11.65□□□□□ -0.55
RAB11A-209ENST00000569896 PLCG2P16885 1265 aa11.65□□□□□ -0.55
RAB11A-209ENST00000569896 SETBP1Q9Y6X0 1596 aa11.64□□□□□ -0.55
RAB11A-209ENST00000569896 CCER1Q8TC90 406 aaPredicted RBP11.64□□□□□ -0.55
RAB11A-209ENST00000569896 TBX22Q9Y458 520 aa11.64□□□□□ -0.55
RAB11A-209ENST00000569896 ADGRF5Q8IZF2 1346 aa11.64□□□□□ -0.55
RAB11A-209ENST00000569896 LTBP4Q8N2S1 1624 aa11.63□□□□□ -0.55
RAB11A-209ENST00000569896 ADAMTS13Q76LX8 1427 aa11.62□□□□□ -0.55
RAB11A-209ENST00000569896 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
RAB11A-209ENST00000569896 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
RAB11A-209ENST00000569896 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
RAB11A-209ENST00000569896 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
RAB11A-209ENST00000569896 CPS1P31327 1500 aa11.61□□□□□ -0.55
RAB11A-209ENST00000569896 KCNA6P17658 529 aa11.61□□□□□ -0.55
RAB11A-209ENST00000569896 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
RAB11A-209ENST00000569896 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
RAB11A-209ENST00000569896 MYOM2P54296 1465 aa11.61□□□□□ -0.55
RAB11A-209ENST00000569896 LAMC1P11047 1609 aa11.6□□□□□ -0.55
RAB11A-209ENST00000569896 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
RAB11A-209ENST00000569896 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
RAB11A-209ENST00000569896 PROSER2Q86WR7 435 aaPredicted RBP11.6□□□□□ -0.55
RAB11A-209ENST00000569896 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
RAB11A-209ENST00000569896 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
RAB11A-209ENST00000569896 PIK3R4Q99570 1358 aa11.59□□□□□ -0.55
RAB11A-209ENST00000569896 NWD1Q149M9 1564 aa11.58□□□□□ -0.56
RAB11A-209ENST00000569896 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
RAB11A-209ENST00000569896 METP08581 1390 aa11.58□□□□□ -0.56
RAB11A-209ENST00000569896 L3MBTL2Q969R5 705 aa11.58□□□□□ -0.56
RAB11A-209ENST00000569896 OCEL1Q9H607 264 aa11.58□□□□□ -0.56
RAB11A-209ENST00000569896 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
RAB11A-209ENST00000569896 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
RAB11A-209ENST00000569896 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
RAB11A-209ENST00000569896 NKTRP30414 1462 aaKnown RBP11.57□□□□□ -0.56
RAB11A-209ENST00000569896 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
RAB11A-209ENST00000569896 CLSPNQ9HAW4 1339 aa11.56□□□□□ -0.56
RAB11A-209ENST00000569896 TMEM132EQ6IEE7 984 aa11.56□□□□□ -0.56
RAB11A-209ENST00000569896 C14orf37Q86TY3 774 aa11.56□□□□□ -0.56
RAB11A-209ENST00000569896 C14orf93Q9H972 538 aaKnown RBP11.56□□□□□ -0.56
RAB11A-209ENST00000569896 STK26Q9P289 416 aa11.56□□□□□ -0.56
RAB11A-209ENST00000569896 LRRC7Q96NW7 1537 aa11.56□□□□□ -0.56
RAB11A-209ENST00000569896 PTPRUQ92729 1446 aa11.56□□□□□ -0.56
RAB11A-209ENST00000569896 KIAA1210Q9ULL0 1709 aa11.56□□□□□ -0.56
RAB11A-209ENST00000569896 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
RAB11A-209ENST00000569896 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
RAB11A-209ENST00000569896 TMEM94Q12767 1356 aa11.54□□□□□ -0.56
RAB11A-209ENST00000569896 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms