RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 EEA1Q15075 1411 aa8.99□□□□□ -0.97
CHKA-204ENST00000528235 GGT6Q6P531 493 aa8.99□□□□□ -0.97
CHKA-204ENST00000528235 ZNF777Q9ULD5 760 aaPredicted RBP8.99□□□□□ -0.97
CHKA-204ENST00000528235 A2ML1A8K2U0 1454 aa8.98□□□□□ -0.97
CHKA-204ENST00000528235 DSG2Q14126 1118 aa8.98□□□□□ -0.97
CHKA-204ENST00000528235 SPAG9O60271 1321 aaKnown RBP8.98□□□□□ -0.97
CHKA-204ENST00000528235 ATP7AQ04656 1500 aa8.97□□□□□ -0.97
CHKA-204ENST00000528235 NEURL4Q96JN8 1562 aa8.97□□□□□ -0.97
CHKA-204ENST00000528235 CFAP65Q6ZU64 1925 aaKnown RBP8.97□□□□□ -0.97
CHKA-204ENST00000528235 STRCP1A6NGW2 1772 aa8.96□□□□□ -0.97
CHKA-204ENST00000528235 RNF17Q9BXT8 1623 aaKnown RBP8.96□□□□□ -0.98
CHKA-204ENST00000528235 IQGAP1P46940 1657 aa8.96□□□□□ -0.98
CHKA-204ENST00000528235 SYCP2Q9BX26 1530 aa8.95□□□□□ -0.98
CHKA-204ENST00000528235 VWDEQ8N2E2 1590 aa8.95□□□□□ -0.98
CHKA-204ENST00000528235 UBTFP17480 764 aaKnown RBP8.95□□□□□ -0.98
CHKA-204ENST00000528235 ANKLE2Q86XL3 938 aa8.95□□□□□ -0.98
CHKA-204ENST00000528235 A2MP01023 1474 aa8.95□□□□□ -0.98
CHKA-204ENST00000528235 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
CHKA-204ENST00000528235 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
CHKA-204ENST00000528235 ALKQ9UM73 1620 aa8.94□□□□□ -0.98
CHKA-204ENST00000528235 SETD1AO15047 1707 aaKnown RBP8.94□□□□□ -0.98
CHKA-204ENST00000528235 SYNMO15061 1565 aa8.94□□□□□ -0.98
CHKA-204ENST00000528235 ARHGAP33O14559 1287 aa8.93□□□□□ -0.98
CHKA-204ENST00000528235 PDE4AP27815 886 aa8.93□□□□□ -0.98
CHKA-204ENST00000528235 HNRNPMP52272 730 aaKnown RBP eCLIP8.93□□□□□ -0.986e-7■■■■□ 23.7
CHKA-204ENST00000528235 AXIN2Q9Y2T1 843 aa8.93□□□□□ -0.98
CHKA-204ENST00000528235 ARHGAP35Q9NRY4 1499 aa8.93□□□□□ -0.98
CHKA-204ENST00000528235 DEPDC5O75140 1603 aa8.93□□□□□ -0.98
CHKA-204ENST00000528235 XIRP1Q702N8 1843 aaKnown RBP8.92□□□□□ -0.98
CHKA-204ENST00000528235 CCDC18Q5T9S5 1454 aa8.92□□□□□ -0.98
CHKA-204ENST00000528235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.92□□□□□ -0.98
CHKA-204ENST00000528235 PPP4R3BQ5MIZ7 849 aa8.92□□□□□ -0.98
CHKA-204ENST00000528235 THEMISQ8N1K5 641 aaPredicted RBP8.92□□□□□ -0.98
CHKA-204ENST00000528235 CRISPLD2Q9H0B8 497 aa8.92□□□□□ -0.98
CHKA-204ENST00000528235 RGS17Q9UGC6 210 aaPredicted RBP8.92□□□□□ -0.98
CHKA-204ENST00000528235 UGGT1Q9NYU2 1555 aa8.91□□□□□ -0.98
CHKA-204ENST00000528235 NPHP4O75161 1426 aaPredicted RBP8.91□□□□□ -0.98
CHKA-204ENST00000528235 TNRQ92752 1358 aa8.91□□□□□ -0.98
CHKA-204ENST00000528235 PLEKHH2Q8IVE3 1493 aa8.9□□□□□ -0.98
CHKA-204ENST00000528235 PPP1R15BQ5SWA1 713 aa8.9□□□□□ -0.98
CHKA-204ENST00000528235 POTEEQ6S8J3 1075 aa8.9□□□□□ -0.98
CHKA-204ENST00000528235 LRRC7Q96NW7 1537 aa8.9□□□□□ -0.99
CHKA-204ENST00000528235 FAM135AQ9P2D6 1515 aa8.9□□□□□ -0.99
CHKA-204ENST00000528235 MED14O60244 1454 aa8.89□□□□□ -0.99
CHKA-204ENST00000528235 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
CHKA-204ENST00000528235 FBXO31Q5XUX0 539 aaPredicted RBP8.89□□□□□ -0.99
CHKA-204ENST00000528235 POTEAQ6S8J7 498 aa8.88□□□□□ -0.99
CHKA-204ENST00000528235 OXER1Q8TDS5 423 aa8.88□□□□□ -0.99
CHKA-204ENST00000528235 ZC3H13Q5T200 1668 aaKnown RBP8.88□□□□□ -0.99
CHKA-204ENST00000528235 KDM5DQ9BY66 1539 aa8.87□□□□□ -0.99
CHKA-204ENST00000528235 GPATCH8Q9UKJ3 1502 aaKnown RBP8.87□□□□□ -0.99
CHKA-204ENST00000528235 ADGRD1Q6QNK2 874 aa8.87□□□□□ -0.99
CHKA-204ENST00000528235 UPF1Q92900 1129 aaKnown RBP eCLIP8.87□□□□□ -0.99
CHKA-204ENST00000528235 CFDP1Q9UEE9 299 aaPredicted RBP8.87□□□□□ -0.99
CHKA-204ENST00000528235 PZPP20742 1482 aa8.87□□□□□ -0.99
CHKA-204ENST00000528235 NLRP1Q9C000 1473 aa8.87□□□□□ -0.99
CHKA-204ENST00000528235 KIAA1107Q9UPP5 1409 aa8.87□□□□□ -0.99
CHKA-204ENST00000528235 WASHC2CQ9Y4E1 1318 aa8.86□□□□□ -0.99
CHKA-204ENST00000528235 TK2O00142 265 aa8.86□□□□□ -0.99
CHKA-204ENST00000528235 CASKIN1Q8WXD9 1431 aa8.86□□□□□ -0.99
CHKA-204ENST00000528235 ROBO1Q9Y6N7 1651 aa8.85□□□□□ -0.99
CHKA-204ENST00000528235 KIF3BO15066 747 aa8.85□□□□□ -0.99
CHKA-204ENST00000528235 MIA2Q96PC5 1412 aa8.85□□□□□ -0.99
CHKA-204ENST00000528235 CCNB3Q8WWL7 1395 aa8.85□□□□□ -0.99
CHKA-204ENST00000528235 PHLPP1O60346 1717 aa8.84□□□□□ -0.99
CHKA-204ENST00000528235 UBR1Q8IWV7 1749 aa8.84□□□□□ -0.99
CHKA-204ENST00000528235 DDX27Q96GQ7 796 aaKnown RBP8.84□□□□□ -0.99
CHKA-204ENST00000528235 LARP6Q9BRS8 491 aaKnown RBP8.84□□□□□ -0.99
CHKA-204ENST00000528235 DHX29Q7Z478 1369 aaKnown RBP8.84□□□□□ -0.99
CHKA-204ENST00000528235 PSEN2P49810 448 aa8.83□□□□□ -1
CHKA-204ENST00000528235 STAC3Q96MF2 364 aa8.83□□□□□ -1
CHKA-204ENST00000528235 RTEL1-TNFRSF6BF6WH68 1400 aa8.82□□□□□ -1
CHKA-204ENST00000528235 ZNF454Q8N9F8 522 aa8.82□□□□□ -1
CHKA-204ENST00000528235 FYCO1Q9BQS8 1478 aa8.82□□□□□ -1
CHKA-204ENST00000528235 FAM135BQ49AJ0 1406 aa8.81□□□□□ -1
CHKA-204ENST00000528235 CEP152O94986 1710 aa8.81□□□□□ -1
CHKA-204ENST00000528235 KCNK17Q96T54 332 aa8.81□□□□□ -1
CHKA-204ENST00000528235 DMRTA1Q5VZB9 504 aa8.8□□□□□ -1
CHKA-204ENST00000528235 HCSTQ9UBK5 93 aa8.8□□□□□ -1
CHKA-204ENST00000528235 MAP3K9P80192 1104 aa8.79□□□□□ -1
CHKA-204ENST00000528235 MFSD10Q14728 455 aa8.79□□□□□ -1
CHKA-204ENST00000528235 SCAF11Q99590 1463 aaKnown RBP8.78□□□□□ -1
CHKA-204ENST00000528235 MTUS2Q5JR59 1369 aa8.78□□□□□ -1
CHKA-204ENST00000528235 HRO43593 1189 aa8.78□□□□□ -1
CHKA-204ENST00000528235 EVI5O60447 810 aa8.78□□□□□ -1
CHKA-204ENST00000528235 TXNDC2Q86VQ3 553 aa8.78□□□□□ -1
CHKA-204ENST00000528235 TRIM52Q96A61 297 aa8.78□□□□□ -1
CHKA-204ENST00000528235 ANO8Q9HCE9 1232 aaPredicted RBP8.78□□□□□ -1
CHKA-204ENST00000528235 ZNF644Q9H582 1327 aaPredicted RBP8.78□□□□□ -1
CHKA-204ENST00000528235 TIAM1Q13009 1591 aa8.78□□□□□ -1
CHKA-204ENST00000528235 LRRC9Q6ZRR7 1453 aa8.77□□□□□ -1
CHKA-204ENST00000528235 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
CHKA-204ENST00000528235 BCL2L12Q9HB09 334 aa8.77□□□□□ -1.01
CHKA-204ENST00000528235 EID1Q9Y6B2 187 aa8.77□□□□□ -1.01
CHKA-204ENST00000528235 MBD5Q9P267 1494 aa8.77□□□□□ -1.01
CHKA-204ENST00000528235 PTPREP23469 700 aa8.76□□□□□ -1.01
CHKA-204ENST00000528235 FOSBP53539 338 aa8.76□□□□□ -1.01
CHKA-204ENST00000528235 ZNF772Q68DY9 489 aaPredicted RBP8.76□□□□□ -1.01
CHKA-204ENST00000528235 CCDC141Q6ZP82 1450 aa8.76□□□□□ -1.01
CHKA-204ENST00000528235 JCADQ9P266 1359 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms