RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
VPS45-210ENST00000497638 C3orf80F5H4A9 247 aa13.24□□□□□ -0.29
VPS45-210ENST00000497638 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
VPS45-210ENST00000497638 KCNC4Q03721 635 aa13.24□□□□□ -0.29
VPS45-210ENST00000497638 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
VPS45-210ENST00000497638 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
VPS45-210ENST00000497638 RGS20O76081 388 aa13.23□□□□□ -0.29
VPS45-210ENST00000497638 RNF40O75150 1001 aa13.21□□□□□ -0.29
VPS45-210ENST00000497638 PADI6Q6TGC4 694 aa13.21□□□□□ -0.29
VPS45-210ENST00000497638 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.29
VPS45-210ENST00000497638 BCORL1Q5H9F3 1711 aa13.2□□□□□ -0.3
VPS45-210ENST00000497638 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
VPS45-210ENST00000497638 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
VPS45-210ENST00000497638 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
VPS45-210ENST00000497638 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
VPS45-210ENST00000497638 NEO1Q92859 1461 aa13.16□□□□□ -0.3
VPS45-210ENST00000497638 TTC13Q8NBP0 860 aa13.15□□□□□ -0.3
VPS45-210ENST00000497638 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
VPS45-210ENST00000497638 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
VPS45-210ENST00000497638 RAPGEF3O95398 923 aa13.13□□□□□ -0.31
VPS45-210ENST00000497638 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
VPS45-210ENST00000497638 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
VPS45-210ENST00000497638 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
VPS45-210ENST00000497638 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
VPS45-210ENST00000497638 ATP10BO94823 1461 aa13.11□□□□□ -0.31
VPS45-210ENST00000497638 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
VPS45-210ENST00000497638 SWT1Q5T5J6 900 aaKnown RBP13.11□□□□□ -0.31
VPS45-210ENST00000497638 SOCS7O14512 581 aa13.1□□□□□ -0.31
VPS45-210ENST00000497638 IRX2Q9BZI1 471 aaPredicted RBP13.1□□□□□ -0.31
VPS45-210ENST00000497638 SLC4A3P48751 1232 aa13.09□□□□□ -0.31
VPS45-210ENST00000497638 HSPA2P54652 639 aa13.09□□□□□ -0.31
VPS45-210ENST00000497638 PTGDRQ13258 359 aa13.09□□□□□ -0.31
VPS45-210ENST00000497638 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
VPS45-210ENST00000497638 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
VPS45-210ENST00000497638 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.31
VPS45-210ENST00000497638 POGZQ7Z3K3 1410 aa13.08□□□□□ -0.32
VPS45-210ENST00000497638 SEMA3EO15041 775 aa13.08□□□□□ -0.32
VPS45-210ENST00000497638 TJAP1Q5JTD0 557 aa13.07□□□□□ -0.32
VPS45-210ENST00000497638 EYA1Q99502 592 aa13.07□□□□□ -0.32
VPS45-210ENST00000497638 MTRQ99707 1265 aa13.07□□□□□ -0.32
VPS45-210ENST00000497638 FANCAO15360 1455 aa13.07□□□□□ -0.32
VPS45-210ENST00000497638 ARID3CA6NKF2 412 aa13.06□□□□□ -0.32
VPS45-210ENST00000497638 IL21Q9HBE4 155 aa13.06□□□□□ -0.32
VPS45-210ENST00000497638 DENND4BO75064 1496 aaPredicted RBP13.05□□□□□ -0.32
VPS45-210ENST00000497638 APLP1P51693 650 aa13.05□□□□□ -0.32
VPS45-210ENST00000497638 ILDR2Q71H61 639 aa13.05□□□□□ -0.32
VPS45-210ENST00000497638 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
VPS45-210ENST00000497638 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
VPS45-210ENST00000497638 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
VPS45-210ENST00000497638 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
VPS45-210ENST00000497638 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
VPS45-210ENST00000497638 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
VPS45-210ENST00000497638 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
VPS45-210ENST00000497638 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
VPS45-210ENST00000497638 TTC37Q6PGP7 1564 aa13.02□□□□□ -0.33
VPS45-210ENST00000497638 RAPGEF6Q8TEU7 1601 aa13.02□□□□□ -0.33
VPS45-210ENST00000497638 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
VPS45-210ENST00000497638 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
VPS45-210ENST00000497638 FCHSD2O94868 740 aa13□□□□□ -0.33
VPS45-210ENST00000497638 DNAJB2P25686 324 aa13□□□□□ -0.33
VPS45-210ENST00000497638 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
VPS45-210ENST00000497638 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
VPS45-210ENST00000497638 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
VPS45-210ENST00000497638 ZNF516Q92618 1163 aa12.99□□□□□ -0.33
VPS45-210ENST00000497638 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
VPS45-210ENST00000497638 COPS2P61201 443 aa12.98□□□□□ -0.33
VPS45-210ENST00000497638 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
VPS45-210ENST00000497638 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
VPS45-210ENST00000497638 PREX1Q8TCU6 1659 aa12.98□□□□□ -0.33
VPS45-210ENST00000497638 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
VPS45-210ENST00000497638 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
VPS45-210ENST00000497638 NUP153P49790 1475 aaKnown RBP12.97□□□□□ -0.33
VPS45-210ENST00000497638 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.33
VPS45-210ENST00000497638 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
VPS45-210ENST00000497638 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
VPS45-210ENST00000497638 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
VPS45-210ENST00000497638 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
VPS45-210ENST00000497638 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
VPS45-210ENST00000497638 TMEM134Q9H6X4 195 aa12.93□□□□□ -0.34
VPS45-210ENST00000497638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS45-210ENST00000497638 HECW1Q76N89 1606 aa12.92□□□□□ -0.34
VPS45-210ENST00000497638 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
VPS45-210ENST00000497638 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
VPS45-210ENST00000497638 MLECQ14165 292 aa12.92□□□□□ -0.34
VPS45-210ENST00000497638 PCDHB3Q9Y5E6 796 aa12.92□□□□□ -0.34
VPS45-210ENST00000497638 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
VPS45-210ENST00000497638 NKX2-3Q8TAU0 364 aa12.91□□□□□ -0.34
VPS45-210ENST00000497638 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.91□□□□□ -0.34
VPS45-210ENST00000497638 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
VPS45-210ENST00000497638 C9orf84Q5VXU9 1444 aa12.9□□□□□ -0.34
VPS45-210ENST00000497638 UHRF1BP1Q6BDS2 1440 aa12.9□□□□□ -0.34
VPS45-210ENST00000497638 ATP10AO60312 1499 aa12.9□□□□□ -0.34
VPS45-210ENST00000497638 PTPRTO14522 1441 aa12.89□□□□□ -0.35
VPS45-210ENST00000497638 OATP04181 439 aa12.89□□□□□ -0.35
VPS45-210ENST00000497638 HIC1Q14526 733 aa12.89□□□□□ -0.35
VPS45-210ENST00000497638 PRKD2Q9BZL6 878 aa12.89□□□□□ -0.35
VPS45-210ENST00000497638 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
VPS45-210ENST00000497638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
VPS45-210ENST00000497638 GGCXP38435 758 aa12.88□□□□□ -0.35
VPS45-210ENST00000497638 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms