RNA–Protein interactions for RNA: ENST00000491445.1

NCBP1-204, Transcript of nuclear cap binding protein subunit 1, human

TSL 3

Gene NCBP1, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP1-204	ENST00000491445	TRPC5	Q9UL62	973 aa	Predicted RBP	11.23	□□□□□ -0.61
NCBP1-204	ENST00000491445	KANK1	Q14678	1352 aa		11.23	□□□□□ -0.61
NCBP1-204	ENST00000491445	ATRN	O75882	1429 aa		11.23	□□□□□ -0.61
NCBP1-204	ENST00000491445	ADAMTS13	Q76LX8	1427 aa		11.23	□□□□□ -0.61
NCBP1-204	ENST00000491445	MST1R	Q04912	1400 aa		11.22	□□□□□ -0.61
NCBP1-204	ENST00000491445	C14orf37	Q86TY3	774 aa		11.22	□□□□□ -0.61
NCBP1-204	ENST00000491445	KIF15	Q9NS87	1388 aa		11.22	□□□□□ -0.61
NCBP1-204	ENST00000491445	LAMC1	P11047	1609 aa		11.21	□□□□□ -0.61
NCBP1-204	ENST00000491445	RPRD2	Q5VT52	1461 aa	Known RBP	11.21	□□□□□ -0.61
NCBP1-204	ENST00000491445	PTCH1	Q13635	1447 aa		11.21	□□□□□ -0.61
NCBP1-204	ENST00000491445	MYOM3	Q5VTT5	1437 aa		11.21	□□□□□ -0.61
NCBP1-204	ENST00000491445	RIMS2	Q9UQ26	1411 aa		11.21	□□□□□ -0.61
NCBP1-204	ENST00000491445	BCAN	Q96GW7	911 aa		11.2	□□□□□ -0.62
NCBP1-204	ENST00000491445	BLM	P54132	1417 aa	Predicted RBP	11.19	□□□□□ -0.62
NCBP1-204	ENST00000491445	CLCN6	P51797	869 aa		11.19	□□□□□ -0.62
NCBP1-204	ENST00000491445	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
NCBP1-204	ENST00000491445	USP21	Q9UK80	565 aa		11.19	□□□□□ -0.62
NCBP1-204	ENST00000491445	TMEM131L	A2VDJ0	1609 aa		11.19	□□□□□ -0.62
NCBP1-204	ENST00000491445	CREBZF	Q9NS37	354 aa		11.18	□□□□□ -0.62
NCBP1-204	ENST00000491445	TRPM2	O94759	1503 aa		11.18	□□□□□ -0.62
NCBP1-204	ENST00000491445	PPP1R15A	O75807	674 aa	Predicted RBP	11.17	□□□□□ -0.62
NCBP1-204	ENST00000491445	PTPRU	Q92729	1446 aa		11.17	□□□□□ -0.62
NCBP1-204	ENST00000491445	XRN1	Q8IZH2	1706 aa	Known RBP	11.15	□□□□□ -0.62
NCBP1-204	ENST00000491445	CROCC2	H7BZ55	1655 aa		11.15	□□□□□ -0.62
NCBP1-204	ENST00000491445	MYO5B	Q9ULV0	1848 aa		11.15	□□□□□ -0.62
NCBP1-204	ENST00000491445	AMOTL2	Q9Y2J4	779 aa		11.15	□□□□□ -0.62
NCBP1-204	ENST00000491445	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.15	□□□□□ -0.62
NCBP1-204	ENST00000491445	ABCC5	O15440	1437 aa		11.15	□□□□□ -0.62
NCBP1-204	ENST00000491445	UNC13B	O14795	1591 aa		11.15	□□□□□ -0.62
NCBP1-204	ENST00000491445	SPHKAP	Q2M3C7	1700 aa		11.15	□□□□□ -0.63
NCBP1-204	ENST00000491445	GCC2	Q8IWJ2	1684 aa		11.14	□□□□□ -0.63
NCBP1-204	ENST00000491445	SOS2	Q07890	1332 aa	Predicted RBP	11.14	□□□□□ -0.63
NCBP1-204	ENST00000491445	BCL9L	Q86UU0	1499 aa		11.14	□□□□□ -0.63
NCBP1-204	ENST00000491445	ADAMTS2	O95450	1211 aa		11.14	□□□□□ -0.63
NCBP1-204	ENST00000491445	ADGRL3	Q9HAR2	1447 aa		11.13	□□□□□ -0.63
NCBP1-204	ENST00000491445	RRP7BP	Q9NSQ0	103 aa		11.13	□□□□□ -0.63
NCBP1-204	ENST00000491445	PTPN23	Q9H3S7	1636 aa		11.13	□□□□□ -0.63
NCBP1-204	ENST00000491445	GJD4	Q96KN9	370 aa	Predicted RBP	11.12	□□□□□ -0.63
NCBP1-204	ENST00000491445	MYOM2	P54296	1465 aa		11.12	□□□□□ -0.63
NCBP1-204	ENST00000491445	HRC	P23327	699 aa		11.11	□□□□□ -0.63
NCBP1-204	ENST00000491445	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.11	□□□□□ -0.63
NCBP1-204	ENST00000491445	C1orf167	Q5SNV9	1468 aa		11.11	□□□□□ -0.63
NCBP1-204	ENST00000491445	DDX17	Q92841	729 aa	Known RBP	11.1	□□□□□ -0.63
NCBP1-204	ENST00000491445	LHX8	Q68G74	356 aa		11.09	□□□□□ -0.63
NCBP1-204	ENST00000491445	DEFB132	Q7Z7B7	95 aa		11.09	□□□□□ -0.63
NCBP1-204	ENST00000491445	ZNF579	Q8NAF0	562 aa	Known RBP	11.09	□□□□□ -0.63
NCBP1-204	ENST00000491445	DAPK1	P53355	1430 aa		11.09	□□□□□ -0.63
NCBP1-204	ENST00000491445	ANKRD30A	Q9BXX3	1397 aa		11.08	□□□□□ -0.64
NCBP1-204	ENST00000491445	MARF1	Q9Y4F3	1742 aa	Known RBP	11.08	□□□□□ -0.64
NCBP1-204	ENST00000491445	NRXN3	Q9Y4C0	1643 aa		11.08	□□□□□ -0.64
NCBP1-204	ENST00000491445	GLI3	P10071	1580 aa		11.07	□□□□□ -0.64
NCBP1-204	ENST00000491445	SF3B2	Q13435	895 aa	Known RBP	11.07	□□□□□ -0.64
NCBP1-204	ENST00000491445	NALCN	Q8IZF0	1738 aa		11.06	□□□□□ -0.64
NCBP1-204	ENST00000491445	RALGAPB	Q86X10	1494 aa		11.06	□□□□□ -0.64
NCBP1-204	ENST00000491445	ADGRL2	O95490	1459 aa		11.06	□□□□□ -0.64
NCBP1-204	ENST00000491445	SLIT2	O94813	1529 aa		11.05	□□□□□ -0.64
NCBP1-204	ENST00000491445	ONECUT3	O60422	494 aa	Predicted RBP	11.05	□□□□□ -0.64
NCBP1-204	ENST00000491445	POTEI	P0CG38	1075 aa		11.05	□□□□□ -0.64
NCBP1-204	ENST00000491445	PRAG1	Q86YV5	1406 aa		11.04	□□□□□ -0.64
NCBP1-204	ENST00000491445	YY1	P25490	414 aa		11.04	□□□□□ -0.64
NCBP1-204	ENST00000491445	IQGAP3	Q86VI3	1631 aa		11.04	□□□□□ -0.64
NCBP1-204	ENST00000491445	MET	P08581	1390 aa		11.03	□□□□□ -0.64
NCBP1-204	ENST00000491445	BRWD3	Q6RI45	1802 aa		11.03	□□□□□ -0.64
NCBP1-204	ENST00000491445	PAK3	O75914	559 aa	Predicted RBP	11.03	□□□□□ -0.64
NCBP1-204	ENST00000491445	IFFO2	Q5TF58	517 aa		11.03	□□□□□ -0.64
NCBP1-204	ENST00000491445	UNC5CL	Q8IV45	518 aa		11.03	□□□□□ -0.64
NCBP1-204	ENST00000491445	DCBLD2	Q96PD2	775 aa		11.03	□□□□□ -0.64
NCBP1-204	ENST00000491445	BAG6	P46379	1132 aa		11.02	□□□□□ -0.65
NCBP1-204	ENST00000491445	PXDN	Q92626	1479 aa		11.01	□□□□□ -0.65
NCBP1-204	ENST00000491445	PSD	A5PKW4	1024 aa	Predicted RBP	11.01	□□□□□ -0.65
NCBP1-204	ENST00000491445	ORAI2	Q96SN7	254 aa		11.01	□□□□□ -0.65
NCBP1-204	ENST00000491445	NPHP3	Q7Z494	1330 aa		11.01	□□□□□ -0.65
NCBP1-204	ENST00000491445	DISP2	A7MBM2	1401 aa		11.01	□□□□□ -0.65
NCBP1-204	ENST00000491445	ANKRD50	Q9ULJ7	1429 aa		11.01	□□□□□ -0.65
NCBP1-204	ENST00000491445	CHGA	P10645	457 aa	Known RBP	11	□□□□□ -0.65
NCBP1-204	ENST00000491445	KANK4	Q5T7N3	995 aa	Predicted RBP	11	□□□□□ -0.65
NCBP1-204	ENST00000491445	SEPT12	Q8IYM1	358 aa		11	□□□□□ -0.65
NCBP1-204	ENST00000491445		E9PCH4	1651 aa		10.99	□□□□□ -0.65
NCBP1-204	ENST00000491445	VPS8	Q8N3P4	1428 aa		10.99	□□□□□ -0.65
NCBP1-204	ENST00000491445	MNX1	P50219	401 aa	Predicted RBP	10.98	□□□□□ -0.65
NCBP1-204	ENST00000491445	VPS72	Q15906	364 aa		10.98	□□□□□ -0.65
NCBP1-204	ENST00000491445	KRT27	Q7Z3Y8	459 aa		10.98	□□□□□ -0.65
NCBP1-204	ENST00000491445	PROM2	Q8N271	834 aa		10.98	□□□□□ -0.65
NCBP1-204	ENST00000491445	RGPD1	P0DJD0	1748 aa		10.95	□□□□□ -0.66
NCBP1-204	ENST00000491445	NWD2	Q9ULI1	1742 aa		10.95	□□□□□ -0.66
NCBP1-204	ENST00000491445	USP32	Q8NFA0	1604 aa		10.95	□□□□□ -0.66
NCBP1-204	ENST00000491445	LRPPRC	P42704	1394 aa	Known RBP	10.95	□□□□□ -0.66
NCBP1-204	ENST00000491445	CHIC2	Q9UKJ5	165 aa		10.95	□□□□□ -0.66
NCBP1-204	ENST00000491445	CDC42BPG	Q6DT37	1551 aa		10.94	□□□□□ -0.66
NCBP1-204	ENST00000491445	HFM1	A2PYH4	1435 aa		10.94	□□□□□ -0.66
NCBP1-204	ENST00000491445	GALR2	O43603	387 aa	Predicted RBP	10.94	□□□□□ -0.66
NCBP1-204	ENST00000491445	R3HDM1	Q15032	1099 aa	Known RBP	10.94	□□□□□ -0.66
NCBP1-204	ENST00000491445	ROBO2	Q9HCK4	1378 aa		10.93	□□□□□ -0.66
NCBP1-204	ENST00000491445	PARD3	Q8TEW0	1356 aa		10.92	□□□□□ -0.66
NCBP1-204	ENST00000491445	NINL	Q9Y2I6	1382 aa		10.92	□□□□□ -0.66
NCBP1-204	ENST00000491445	EN1	Q05925	392 aa	Predicted RBP	10.92	□□□□□ -0.66
NCBP1-204	ENST00000491445	NEXMIF	Q5QGS0	1516 aa		10.92	□□□□□ -0.66
NCBP1-204	ENST00000491445	SPATA31A3	Q5VYP0	1347 aa		10.91	□□□□□ -0.66
NCBP1-204	ENST00000491445	PHF12	Q96QT6	1004 aa		10.91	□□□□□ -0.66
NCBP1-204	ENST00000491445	TNS1	Q9HBL0	1735 aa	Known RBP	10.9	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms