RNA–Protein interactions for RNA: ENST00000491445.1

NCBP1-204, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-204ENST00000491445 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
NCBP1-204ENST00000491445 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
NCBP1-204ENST00000491445 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
NCBP1-204ENST00000491445 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
NCBP1-204ENST00000491445 NISCHQ9Y2I1 1504 aa18.35■□□□□ 0.53
NCBP1-204ENST00000491445 FOXD1Q16676 465 aa17.48■□□□□ 0.39
NCBP1-204ENST00000491445 ABCC9O60706 1549 aa17.17■□□□□ 0.34
NCBP1-204ENST00000491445 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
NCBP1-204ENST00000491445 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
NCBP1-204ENST00000491445 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
NCBP1-204ENST00000491445 MSH5O43196 834 aa16.45■□□□□ 0.22
NCBP1-204ENST00000491445 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
NCBP1-204ENST00000491445 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
NCBP1-204ENST00000491445 ADRA2BP18089 450 aa16.22■□□□□ 0.19
NCBP1-204ENST00000491445 RB1CC1Q8TDY2 1594 aa16.19■□□□□ 0.18
NCBP1-204ENST00000491445 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
NCBP1-204ENST00000491445 NACADO15069 1562 aa15.98■□□□□ 0.15
NCBP1-204ENST00000491445 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
NCBP1-204ENST00000491445 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
NCBP1-204ENST00000491445 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.11
NCBP1-204ENST00000491445 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
NCBP1-204ENST00000491445 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
NCBP1-204ENST00000491445 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
NCBP1-204ENST00000491445 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
NCBP1-204ENST00000491445 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
NCBP1-204ENST00000491445 DCAF8L2P0C7V8 631 aa15.51■□□□□ 0.07
NCBP1-204ENST00000491445 EIF4G1Q04637 1599 aaKnown RBP15.39■□□□□ 0.05
NCBP1-204ENST00000491445 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
NCBP1-204ENST00000491445 CUX2O14529 1486 aa15.16■□□□□ 0.02
NCBP1-204ENST00000491445 ZCCHC6Q5VYS8 1495 aaKnown RBP15.1■□□□□ 0.01
NCBP1-204ENST00000491445 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
NCBP1-204ENST00000491445 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
NCBP1-204ENST00000491445 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
NCBP1-204ENST00000491445 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
NCBP1-204ENST00000491445 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
NCBP1-204ENST00000491445 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
NCBP1-204ENST00000491445 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
NCBP1-204ENST00000491445 THOC2Q8NI27 1593 aaKnown RBP14.64□□□□□ -0.07
NCBP1-204ENST00000491445 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
NCBP1-204ENST00000491445 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
NCBP1-204ENST00000491445 NESP48681 1621 aa14.59□□□□□ -0.07
NCBP1-204ENST00000491445 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
NCBP1-204ENST00000491445 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
NCBP1-204ENST00000491445 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
NCBP1-204ENST00000491445 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
NCBP1-204ENST00000491445 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
NCBP1-204ENST00000491445 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
NCBP1-204ENST00000491445 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
NCBP1-204ENST00000491445 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
NCBP1-204ENST00000491445 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
NCBP1-204ENST00000491445 WDR62O43379 1518 aa14.33□□□□□ -0.12
NCBP1-204ENST00000491445 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
NCBP1-204ENST00000491445 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
NCBP1-204ENST00000491445 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
NCBP1-204ENST00000491445 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
NCBP1-204ENST00000491445 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
NCBP1-204ENST00000491445 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
NCBP1-204ENST00000491445 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
NCBP1-204ENST00000491445 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
NCBP1-204ENST00000491445 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
NCBP1-204ENST00000491445 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
NCBP1-204ENST00000491445 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
NCBP1-204ENST00000491445 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
NCBP1-204ENST00000491445 ARHGEF11O15085 1522 aa14.09□□□□□ -0.15
NCBP1-204ENST00000491445 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
NCBP1-204ENST00000491445 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
NCBP1-204ENST00000491445 RNF39Q9H2S5 420 aa14□□□□□ -0.17
NCBP1-204ENST00000491445 CFTRP13569 1480 aa13.99□□□□□ -0.17
NCBP1-204ENST00000491445 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
NCBP1-204ENST00000491445 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
NCBP1-204ENST00000491445 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
NCBP1-204ENST00000491445 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
NCBP1-204ENST00000491445 ARAP1Q96P48 1450 aa13.91□□□□□ -0.18
NCBP1-204ENST00000491445 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
NCBP1-204ENST00000491445 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
NCBP1-204ENST00000491445 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
NCBP1-204ENST00000491445 WIZO95785 1651 aa13.85□□□□□ -0.19
NCBP1-204ENST00000491445 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
NCBP1-204ENST00000491445 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
NCBP1-204ENST00000491445 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
NCBP1-204ENST00000491445 CHD1O14646 1710 aa13.75□□□□□ -0.21
NCBP1-204ENST00000491445 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
NCBP1-204ENST00000491445 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
NCBP1-204ENST00000491445 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
NCBP1-204ENST00000491445 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.21
NCBP1-204ENST00000491445 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
NCBP1-204ENST00000491445 CLASP1Q7Z460 1538 aa13.67□□□□□ -0.22
NCBP1-204ENST00000491445 AQRO60306 1485 aaKnown RBP eCLIP13.66□□□□□ -0.22
NCBP1-204ENST00000491445 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
NCBP1-204ENST00000491445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
NCBP1-204ENST00000491445 FBLN2P98095 1184 aa13.59□□□□□ -0.23
NCBP1-204ENST00000491445 SYNJ1O43426 1573 aa13.58□□□□□ -0.23
NCBP1-204ENST00000491445 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
NCBP1-204ENST00000491445 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
NCBP1-204ENST00000491445 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
NCBP1-204ENST00000491445 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
NCBP1-204ENST00000491445 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.25
NCBP1-204ENST00000491445 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
NCBP1-204ENST00000491445 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
NCBP1-204ENST00000491445 CHMP7Q8WUX9 453 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms