RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
SSX3-201ENST00000298396 PAXIP1Q6ZW49 1069 aaPredicted RBP8.79□□□□□ -1
SSX3-201ENST00000298396 TRIM52Q96A61 297 aa8.79□□□□□ -1
SSX3-201ENST00000298396 CABP2Q9NPB3 220 aa8.79□□□□□ -1
SSX3-201ENST00000298396 RYDENQ9NUL5 291 aaKnown RBP8.79□□□□□ -1
SSX3-201ENST00000298396 TMEM131LA2VDJ0 1609 aa8.79□□□□□ -1
SSX3-201ENST00000298396 LMTK3Q96Q04 1460 aa8.78□□□□□ -1
SSX3-201ENST00000298396 EFCAB3Q8N7B9 438 aa8.78□□□□□ -1
SSX3-201ENST00000298396 MPHOSPH9Q99550 1183 aa8.78□□□□□ -1
SSX3-201ENST00000298396 STRCQ7RTU9 1775 aa8.78□□□□□ -1
SSX3-201ENST00000298396 IFT172Q9UG01 1749 aa8.77□□□□□ -1
SSX3-201ENST00000298396 DHX57Q6P158 1386 aaKnown RBP8.77□□□□□ -1.01
SSX3-201ENST00000298396 TNRQ92752 1358 aa8.77□□□□□ -1.01
SSX3-201ENST00000298396 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
SSX3-201ENST00000298396 POLR1AO95602 1720 aaPredicted RBP8.77□□□□□ -1.01
SSX3-201ENST00000298396 ADGRB3O60242 1522 aa8.76□□□□□ -1.01
SSX3-201ENST00000298396 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
SSX3-201ENST00000298396 PPLO60437 1756 aa8.76□□□□□ -1.01
SSX3-201ENST00000298396 ANKRD30BQ9BXX2 1392 aa8.75□□□□□ -1.01
SSX3-201ENST00000298396 ATN1P54259 1190 aaPredicted RBP8.75□□□□□ -1.01
SSX3-201ENST00000298396 NLRP1Q9C000 1473 aa8.75□□□□□ -1.01
SSX3-201ENST00000298396 IER5LQ5T953 404 aa8.74□□□□□ -1.01
SSX3-201ENST00000298396 TRIM35Q9UPQ4 493 aa8.74□□□□□ -1.01
SSX3-201ENST00000298396 UHRF1BP1Q6BDS2 1440 aa8.73□□□□□ -1.01
SSX3-201ENST00000298396 NLRP6P59044 892 aa8.73□□□□□ -1.01
SSX3-201ENST00000298396 MS4A4AQ96JQ5 239 aa8.73□□□□□ -1.01
SSX3-201ENST00000298396 CFAP44Q96MT7 982 aa8.73□□□□□ -1.01
SSX3-201ENST00000298396 NEURL4Q96JN8 1562 aa8.73□□□□□ -1.01
SSX3-201ENST00000298396 POTEIP0CG38 1075 aa8.72□□□□□ -1.01
SSX3-201ENST00000298396 IDI1Q13907 227 aa8.72□□□□□ -1.01
SSX3-201ENST00000298396 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
SSX3-201ENST00000298396 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
SSX3-201ENST00000298396 SPATA31E1Q6ZUB1 1445 aa8.71□□□□□ -1.01
SSX3-201ENST00000298396 ARHGAP23Q9P227 1491 aa8.71□□□□□ -1.01
SSX3-201ENST00000298396 SLIT1O75093 1534 aa8.71□□□□□ -1.01
SSX3-201ENST00000298396 NEXMIFQ5QGS0 1516 aa8.71□□□□□ -1.01
SSX3-201ENST00000298396 NRXN3Q9Y4C0 1643 aa8.71□□□□□ -1.02
SSX3-201ENST00000298396 SETD1AO15047 1707 aaKnown RBP8.71□□□□□ -1.02
SSX3-201ENST00000298396 IQGAP1P46940 1657 aa8.7□□□□□ -1.02
SSX3-201ENST00000298396 ZFYVE9O95405 1425 aa8.7□□□□□ -1.02
SSX3-201ENST00000298396 HSPA2P54652 639 aa8.69□□□□□ -1.02
SSX3-201ENST00000298396 IRX5P78411 483 aaPredicted RBP8.69□□□□□ -1.02
SSX3-201ENST00000298396 MKRN3Q13064 507 aaKnown RBP8.69□□□□□ -1.02
SSX3-201ENST00000298396 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
SSX3-201ENST00000298396 CCDC144AA2RUR9 1427 aa8.69□□□□□ -1.02
SSX3-201ENST00000298396 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
SSX3-201ENST00000298396 SLC52A1Q9NWF4 448 aa8.68□□□□□ -1.02
SSX3-201ENST00000298396 STRCP1A6NGW2 1772 aa8.67□□□□□ -1.02
SSX3-201ENST00000298396 PDCD7Q8N8D1 485 aaKnown RBP8.67□□□□□ -1.02
SSX3-201ENST00000298396 DCBLD2Q96PD2 775 aa8.67□□□□□ -1.02
SSX3-201ENST00000298396 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
SSX3-201ENST00000298396 TMEM2Q9UHN6 1383 aa8.66□□□□□ -1.02
SSX3-201ENST00000298396 PPP1R37O75864 691 aa8.66□□□□□ -1.02
SSX3-201ENST00000298396 HAP1P54257 671 aaPredicted RBP8.66□□□□□ -1.02
SSX3-201ENST00000298396 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
SSX3-201ENST00000298396 RIMS2Q9UQ26 1411 aa8.65□□□□□ -1.02
SSX3-201ENST00000298396 LTKP29376 864 aa8.65□□□□□ -1.02
SSX3-201ENST00000298396 VSIG10Q8N0Z9 540 aa8.65□□□□□ -1.02
SSX3-201ENST00000298396 MED14O60244 1454 aa8.64□□□□□ -1.03
SSX3-201ENST00000298396 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
SSX3-201ENST00000298396 CHD2O14647 1828 aaKnown RBP8.64□□□□□ -1.03
SSX3-201ENST00000298396 SLC39A7Q92504 469 aa8.64□□□□□ -1.03
SSX3-201ENST00000298396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSX3-201ENST00000298396 SETBP1Q9Y6X0 1596 aa8.64□□□□□ -1.03
SSX3-201ENST00000298396 NRXN1Q9ULB1 1477 aa8.64□□□□□ -1.03
SSX3-201ENST00000298396 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
SSX3-201ENST00000298396 OCEL1Q9H607 264 aa8.63□□□□□ -1.03
SSX3-201ENST00000298396 XIRP1Q702N8 1843 aaKnown RBP8.63□□□□□ -1.03
SSX3-201ENST00000298396 MYOM2P54296 1465 aa8.63□□□□□ -1.03
SSX3-201ENST00000298396 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
SSX3-201ENST00000298396 C7P10643 843 aa8.62□□□□□ -1.03
SSX3-201ENST00000298396 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
SSX3-201ENST00000298396 LHX8Q68G74 356 aa8.62□□□□□ -1.03
SSX3-201ENST00000298396 THEMISQ8N1K5 641 aaPredicted RBP8.62□□□□□ -1.03
SSX3-201ENST00000298396 ASXL1Q8IXJ9 1541 aa8.62□□□□□ -1.03
SSX3-201ENST00000298396 KIAA1210Q9ULL0 1709 aa8.61□□□□□ -1.03
SSX3-201ENST00000298396 KDM2AQ9Y2K7 1162 aa8.61□□□□□ -1.03
SSX3-201ENST00000298396 NPHP4O75161 1426 aaPredicted RBP8.61□□□□□ -1.03
SSX3-201ENST00000298396 ADAMTS13Q76LX8 1427 aa8.61□□□□□ -1.03
SSX3-201ENST00000298396 TRPM1Q7Z4N2 1603 aa8.61□□□□□ -1.03
SSX3-201ENST00000298396 ALKQ9UM73 1620 aa8.61□□□□□ -1.03
SSX3-201ENST00000298396 RGL3Q3MIN7 710 aa8.6□□□□□ -1.03
SSX3-201ENST00000298396 LAMC1P11047 1609 aa8.6□□□□□ -1.03
SSX3-201ENST00000298396 PIK3C2GO75747 1445 aa8.6□□□□□ -1.03
SSX3-201ENST00000298396 DIP2AQ14689 1571 aa8.6□□□□□ -1.03
SSX3-201ENST00000298396 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
SSX3-201ENST00000298396 PLEKHG1Q9ULL1 1385 aa8.6□□□□□ -1.03
SSX3-201ENST00000298396 ADGRF5Q8IZF2 1346 aa8.59□□□□□ -1.03
SSX3-201ENST00000298396 NEUROD1Q13562 356 aa8.59□□□□□ -1.03
SSX3-201ENST00000298396 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
SSX3-201ENST00000298396 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.03
SSX3-201ENST00000298396 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
SSX3-201ENST00000298396 NWD1Q149M9 1564 aa8.59□□□□□ -1.03
SSX3-201ENST00000298396 RPGRIP1LQ68CZ1 1315 aa8.58□□□□□ -1.04
SSX3-201ENST00000298396 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
SSX3-201ENST00000298396 KNDC1Q76NI1 1749 aa8.58□□□□□ -1.04
SSX3-201ENST00000298396 PRAG1Q86YV5 1406 aa8.58□□□□□ -1.04
SSX3-201ENST00000298396 CADPS2Q86UW7 1296 aa8.58□□□□□ -1.04
SSX3-201ENST00000298396 ANKLE2Q86XL3 938 aa8.58□□□□□ -1.04
SSX3-201ENST00000298396 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms