RNA–Protein interactions for RNA: ENSMUST00000120363.1

Hoxa1-202, Transcript of Homeobox protein Hox-A1, mousemouse

TSL 1 (best) BASIC

Gene Hoxa1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1-202ENSMUST00000120363 Rsph4aQ8BYM7 716 aa23.69■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 Synj2Q9D2G5 1434 aa23.68■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 CenpjQ569L8 1344 aa23.68■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 AU022751B1B0V2 589 aa23.67■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 Hfm1D3Z4R1 1434 aa23.67■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 Stag3O70576 1240 aa23.66■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 CrbnQ8C7D2 445 aa23.65■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 Usp19Q3UJD6 1360 aa23.65■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 Rwdd1Q9CQK7 243 aa23.64■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 Cul9Q80TT8 1865 aa23.64■■□□□ 1.38
Hoxa1-202ENSMUST00000120363 Zmym3Q9JLM4 1370 aa23.64■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Ralbp1Q62172 648 aa23.61■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Golga2Q921M4 999 aa23.6■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Hecw2Q6I6G8 1578 aa23.6■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Kcnh8P59111 1102 aa23.6■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Ahdc1Q6PAL7 1594 aaKnown RBP23.59■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Yeats2Q3TUF7 1407 aa23.59■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Map4k4P97820 1233 aaKnown RBP23.59■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Arhgap23Q69ZH9 1483 aa23.59■■□□□ 1.37
Hoxa1-202ENSMUST00000120363 Speer4f1Q9D5Q6 258 aa23.57■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Kiaa1107Q80TK0 1369 aa23.57■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Scaf11E9PZM7 1456 aaKnown RBP23.56■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Ccdc30Q8BVF4 654 aa23.55■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 IbtkQ6ZPR6 1352 aaKnown RBP23.55■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Slc4a3P16283 1227 aa23.54■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Uspl1Q3ULM6 1089 aa23.54■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Ncbp3Q8BZR9 615 aaKnown RBP23.54■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Nrxn1Q9CS84 1514 aa23.54■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Prrc2bQ7TPM1 1486 aaKnown RBP23.54■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Adgrl1Q80TR1 1466 aa23.53■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Med14A2ABV5 1459 aaKnown RBP23.53■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Pak3Q61036 559 aa23.52■■□□□ 1.36
Hoxa1-202ENSMUST00000120363 Cald1E9QA15 768 aaKnown RBP23.5■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 Qser1A2BIE1 1698 aa23.5■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 Egfem1Q8C088 590 aa23.5■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 Cnga1P29974 684 aa23.49■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 GsdmaQ9EST1 446 aa23.49■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 CltcQ68FD5 1675 aaKnown RBP23.48■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 Iqsec2Q5DU25 1478 aa23.48■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 Ipo9Q91YE6 1041 aa23.47■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 AampJ3QN89 436 aa23.47■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 Plekhg1F6S200 1446 aa23.46■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 Kdm2bQ6P1G2 1309 aa23.45■■□□□ 1.35
Hoxa1-202ENSMUST00000120363 PtprmP28828 1452 aa23.45■■□□□ 1.34
Hoxa1-202ENSMUST00000120363 Exosc9Q9JHI7 438 aaKnown RBP23.43■■□□□ 1.34
Hoxa1-202ENSMUST00000120363 Arhgef28P97433 1693 aa23.41■■□□□ 1.34
Hoxa1-202ENSMUST00000120363 Shq1Q7TMX5 569 aa23.39■■□□□ 1.34
Hoxa1-202ENSMUST00000120363 Mapk8ip3Q9ESN9 1337 aa23.39■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Neurod2Q62414 383 aa23.38■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Itsn1Q9Z0R4 1714 aa23.38■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Naip7Q9JIB3 1402 aa23.37■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Ttll13A4Q9F6 804 aa23.37■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Ciz1Q8VEH2 845 aa23.37■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Gsto1O09131 240 aa23.36■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Kif13aQ9EQW7 1749 aa23.36■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 NpatQ8BMA5 1420 aa23.36■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Znf541Q0GGX2 1363 aa23.35■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Ppp1r18Q8BQ30 594 aa23.35■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 EspnQ9ET47 871 aa23.35■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 FanciQ8K368 1330 aa23.34■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Atp1b4Q99ME6 356 aa23.34■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 P2rx7Q9Z1M0 595 aa23.34■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Zc3h13E9Q784 1729 aaKnown RBP23.34■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Stk26Q99JT2 416 aa23.33■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Cep170bQ80U49 1574 aa23.33■■□□□ 1.33
Hoxa1-202ENSMUST00000120363 Fam135bQ9DAI6 1403 aa23.32■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 RictorQ6QI06 1708 aa23.31■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Prdm10Q3UTQ7 1184 aa23.3■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Trim58Q5NCC9 485 aa23.3■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Tsen2Q6P7W5 460 aa23.3■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Smc5Q8CG46 1101 aaKnown RBP23.29■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 NktrP30415 1453 aa23.29■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Abca14E9Q8F8 1683 aa23.28■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Utp14aQ640M1 767 aaKnown RBP23.28■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Afap1Q80YS6 731 aa23.28■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 U2af1Q9D883 239 aaKnown RBP23.28■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Dip2aQ8BWT5 1523 aa23.27■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Znf521Q6KAS7 1311 aa23.27■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 PplQ9R269 1755 aa23.27■■□□□ 1.32
Hoxa1-202ENSMUST00000120363 Chmp5Q9D7S9 219 aa23.26■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Atp2b2Q9R0K7 1198 aa23.26■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Usp32F8VPZ3 1604 aa23.25■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Q9D9H8 365 aa23.25■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Cdk19Q8BWD8 501 aa23.23■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Apbb1Q9QXJ1 710 aa23.23■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Ccar1Q8CH18 1146 aaKnown RBP23.23■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Nwd1A6H603 1563 aa23.22■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Uhrf1bp1B2KF50 1429 aa23.22■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 PaskQ8CEE6 1383 aa23.22■■□□□ 1.31
Hoxa1-202ENSMUST00000120363 Ccdc27Q3V036 639 aa23.2■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Gemin5Q8BX17 1502 aaKnown RBP23.2■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 NinlQ6ZQ12 1394 aa23.2■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Fchsd2Q3USJ8 740 aa23.18■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Atxn3Q9CVD2 355 aa23.17■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Cavin4A2AMM0 362 aa23.16■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Apaf1O88879 1249 aa23.16■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Gas2l2Q5SSG4 860 aa23.16■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Ksr2Q3UVC0 959 aa23.15■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 Ercc6l2Q9JIM3 1537 aa23.15■■□□□ 1.3
Hoxa1-202ENSMUST00000120363 B4galnt3Q6L8S8 986 aa23.14■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms