RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Pak3Q61036 559 aa10.86□□□□□ -0.67
Syne1-202ENSMUST00000095899 Nrxn1Q9CS84 1514 aa10.86□□□□□ -0.67
Syne1-202ENSMUST00000095899 PalldQ9ET54 1408 aa10.85□□□□□ -0.67
Syne1-202ENSMUST00000095899 Esx1O88933 382 aa10.85□□□□□ -0.67
Syne1-202ENSMUST00000095899 Kdm2aP59997 1161 aa10.85□□□□□ -0.67
Syne1-202ENSMUST00000095899 Iqsec2Q5DU25 1478 aa10.85□□□□□ -0.67
Syne1-202ENSMUST00000095899 Ahdc1Q6PAL7 1594 aaKnown RBP10.85□□□□□ -0.67
Syne1-202ENSMUST00000095899 PplQ9R269 1755 aa10.85□□□□□ -0.67
Syne1-202ENSMUST00000095899 Lrrc7Q80TE7 1490 aa10.84□□□□□ -0.67
Syne1-202ENSMUST00000095899 Usp40Q8BWR4 1235 aa10.84□□□□□ -0.67
Syne1-202ENSMUST00000095899 Skint5A7XUY5 1461 aa10.84□□□□□ -0.67
Syne1-202ENSMUST00000095899 P2rx7Q9Z1M0 595 aa10.83□□□□□ -0.68
Syne1-202ENSMUST00000095899 Kif16bB1AVY7 1312 aa10.83□□□□□ -0.68
Syne1-202ENSMUST00000095899 Arhgef28P97433 1693 aa10.82□□□□□ -0.68
Syne1-202ENSMUST00000095899 Med14A2ABV5 1459 aaKnown RBP10.82□□□□□ -0.68
Syne1-202ENSMUST00000095899 InsrP15208 1372 aa10.82□□□□□ -0.68
Syne1-202ENSMUST00000095899 Fan1Q69ZT1 1020 aa10.82□□□□□ -0.68
Syne1-202ENSMUST00000095899 Stard8Q8K031 1019 aa10.82□□□□□ -0.68
Syne1-202ENSMUST00000095899 NktrP30415 1453 aa10.82□□□□□ -0.68
Syne1-202ENSMUST00000095899 Dip2bQ3UH60 1574 aa10.81□□□□□ -0.68
Syne1-202ENSMUST00000095899 Erich6D3Z6S9 713 aa10.81□□□□□ -0.68
Syne1-202ENSMUST00000095899 Stk24Q99KH8 431 aa10.81□□□□□ -0.68
Syne1-202ENSMUST00000095899 Abca14E9Q8F8 1683 aa10.81□□□□□ -0.68
Syne1-202ENSMUST00000095899 Cep170bQ80U49 1574 aa10.81□□□□□ -0.68
Syne1-202ENSMUST00000095899 Gtf2e1Q9D0D5 440 aa10.81□□□□□ -0.68
Syne1-202ENSMUST00000095899 Scaf11E9PZM7 1456 aaKnown RBP10.81□□□□□ -0.68
Syne1-202ENSMUST00000095899 ArxO35085 564 aa10.8□□□□□ -0.68
Syne1-202ENSMUST00000095899 Puf60Q3UEB3 564 aaKnown RBP10.8□□□□□ -0.68
Syne1-202ENSMUST00000095899 Hfm1D3Z4R1 1434 aa10.8□□□□□ -0.68
Syne1-202ENSMUST00000095899 Gm20521D3Z5F7 333 aa10.8□□□□□ -0.68
Syne1-202ENSMUST00000095899 Kif7B7ZNG0 1348 aa10.8□□□□□ -0.68
Syne1-202ENSMUST00000095899 Chd2E9PZM4 1827 aaKnown RBP10.8□□□□□ -0.68
Syne1-202ENSMUST00000095899 Prkrip1Q9CWV6 186 aaKnown RBP10.79□□□□□ -0.68
Syne1-202ENSMUST00000095899 Slc4a3P16283 1227 aa10.79□□□□□ -0.68
Syne1-202ENSMUST00000095899 Kdm2bQ6P1G2 1309 aa10.79□□□□□ -0.68
Syne1-202ENSMUST00000095899 IbtkQ6ZPR6 1352 aaKnown RBP10.77□□□□□ -0.68
Syne1-202ENSMUST00000095899 Nwd1A6H603 1563 aa10.77□□□□□ -0.69
Syne1-202ENSMUST00000095899 Upf2A2AT37 1269 aaKnown RBP10.77□□□□□ -0.69
Syne1-202ENSMUST00000095899 Ccdc9Q8VC31 543 aaKnown RBP10.77□□□□□ -0.69
Syne1-202ENSMUST00000095899 CrbnQ8C7D2 445 aa10.76□□□□□ -0.69
Syne1-202ENSMUST00000095899 Zc3h13E9Q784 1729 aaKnown RBP10.76□□□□□ -0.69
Syne1-202ENSMUST00000095899 Srpk2O54781 681 aaKnown RBP10.75□□□□□ -0.69
Syne1-202ENSMUST00000095899 Fgd1P52734 960 aa10.75□□□□□ -0.69
Syne1-202ENSMUST00000095899 Uspl1Q3ULM6 1089 aa10.75□□□□□ -0.69
Syne1-202ENSMUST00000095899 Prrc2bQ7TPM1 1486 aaKnown RBP10.75□□□□□ -0.69
Syne1-202ENSMUST00000095899 Tcerg1Q8CGF7 1100 aaKnown RBP10.74□□□□□ -0.69
Syne1-202ENSMUST00000095899 Slc52a2Q9D8F3 450 aa10.74□□□□□ -0.69
Syne1-202ENSMUST00000095899 Plekhh1Q80TI1 1356 aa10.74□□□□□ -0.69
Syne1-202ENSMUST00000095899 Usp32F8VPZ3 1604 aa10.74□□□□□ -0.69
Syne1-202ENSMUST00000095899 Anp32bQ9EST5 272 aaKnown RBP10.74□□□□□ -0.69
Syne1-202ENSMUST00000095899 Zmym3Q9JLM4 1370 aa10.74□□□□□ -0.69
Syne1-202ENSMUST00000095899 Ccdc27Q3V036 639 aa10.73□□□□□ -0.69
Syne1-202ENSMUST00000095899 Gas2l2Q5SSG4 860 aa10.73□□□□□ -0.69
Syne1-202ENSMUST00000095899 Rsph4aQ8BYM7 716 aa10.73□□□□□ -0.69
Syne1-202ENSMUST00000095899 Dcaf11Q91VU6 549 aa10.73□□□□□ -0.69
Syne1-202ENSMUST00000095899 Znf521Q6KAS7 1311 aa10.73□□□□□ -0.69
Syne1-202ENSMUST00000095899 Rad21Q61550 635 aaKnown RBP10.72□□□□□ -0.69
Syne1-202ENSMUST00000095899 Naip7Q9JIB3 1402 aa10.71□□□□□ -0.69
Syne1-202ENSMUST00000095899 Gtf3c3Q3TMP1 882 aa10.71□□□□□ -0.69
Syne1-202ENSMUST00000095899 Topaz1E5FYH1 1653 aa10.71□□□□□ -0.7
Syne1-202ENSMUST00000095899 Map4k4P97820 1233 aaKnown RBP10.7□□□□□ -0.7
Syne1-202ENSMUST00000095899 Afap1Q80YS6 731 aa10.7□□□□□ -0.7
Syne1-202ENSMUST00000095899 Ccdc30Q8BVF4 654 aa10.69□□□□□ -0.7
Syne1-202ENSMUST00000095899 Ercc6l2Q9JIM3 1537 aa10.69□□□□□ -0.7
Syne1-202ENSMUST00000095899 Bcl9Q9D219 1425 aa10.68□□□□□ -0.7
Syne1-202ENSMUST00000095899 Znf541Q0GGX2 1363 aa10.68□□□□□ -0.7
Syne1-202ENSMUST00000095899 Cald1E9QA15 768 aaKnown RBP10.67□□□□□ -0.7
Syne1-202ENSMUST00000095899 Brwd3A2AHJ4 1799 aa10.67□□□□□ -0.7
Syne1-202ENSMUST00000095899 Zranb1Q7M760 708 aa10.67□□□□□ -0.7
Syne1-202ENSMUST00000095899 Gemin5Q8BX17 1502 aaKnown RBP10.67□□□□□ -0.7
Syne1-202ENSMUST00000095899 4930407I10RikD3Z5T8 1512 aa10.66□□□□□ -0.7
Syne1-202ENSMUST00000095899 Dip2aQ8BWT5 1523 aa10.66□□□□□ -0.7
Syne1-202ENSMUST00000095899 Plekhg1F6S200 1446 aa10.66□□□□□ -0.7
Syne1-202ENSMUST00000095899 Ttll13A4Q9F6 804 aa10.66□□□□□ -0.7
Syne1-202ENSMUST00000095899 Ncbp3Q8BZR9 615 aaKnown RBP10.65□□□□□ -0.7
Syne1-202ENSMUST00000095899 Cnga1P29974 684 aa10.65□□□□□ -0.7
Syne1-202ENSMUST00000095899 Speer4f1Q9D5Q6 258 aa10.65□□□□□ -0.7
Syne1-202ENSMUST00000095899 Irx3P81067 507 aa10.65□□□□□ -0.71
Syne1-202ENSMUST00000095899 Mbd3Q9Z2D8 285 aaKnown RBP10.65□□□□□ -0.71
Syne1-202ENSMUST00000095899 Atxn3Q9CVD2 355 aa10.64□□□□□ -0.71
Syne1-202ENSMUST00000095899 Stag3O70576 1240 aa10.64□□□□□ -0.71
Syne1-202ENSMUST00000095899 Os9Q8K2C7 672 aa10.64□□□□□ -0.71
Syne1-202ENSMUST00000095899 Golga2Q921M4 999 aa10.64□□□□□ -0.71
Syne1-202ENSMUST00000095899 Kif1aP33173 1695 aa10.63□□□□□ -0.71
Syne1-202ENSMUST00000095899 Uhrf1bp1B2KF50 1429 aa10.63□□□□□ -0.71
Syne1-202ENSMUST00000095899 CenpjQ569L8 1344 aa10.63□□□□□ -0.71
Syne1-202ENSMUST00000095899 Ralbp1Q62172 648 aa10.63□□□□□ -0.71
Syne1-202ENSMUST00000095899 Pik3c2bE9QAN8 1632 aa10.63□□□□□ -0.71
Syne1-202ENSMUST00000095899 Ipo9Q91YE6 1041 aa10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 Rwdd1Q9CQK7 243 aa10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 Phlpp1Q8CHE4 1687 aa10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 IghaA0A0A6YXW6 389 aa10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 Smc5Q8CG46 1101 aaKnown RBP10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 Tet3Q8BG87 1668 aa10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 Chd4Q6PDQ2 1915 aaKnown RBP10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 Pknox2Q8BG99 474 aa10.62□□□□□ -0.71
Syne1-202ENSMUST00000095899 Cps1Q8C196 1500 aa10.61□□□□□ -0.71
Syne1-202ENSMUST00000095899 Spef2Q8C9J3 1734 aa10.61□□□□□ -0.71
Syne1-202ENSMUST00000095899 Tspyl2Q7TQI8 677 aa10.61□□□□□ -0.71
Syne1-202ENSMUST00000095899 Fam135bQ9DAI6 1403 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms