RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Gm35339A0A140LHH9 1649 aa16.55■□□□□ 0.24
Syne1-202ENSMUST00000095899 NischQ80TM9 1593 aa16.36■□□□□ 0.21
Syne1-202ENSMUST00000095899 Abcc9P70170 1546 aa15.99■□□□□ 0.15
Syne1-202ENSMUST00000095899 Abcc8B2RUS7 1588 aa15.64■□□□□ 0.09
Syne1-202ENSMUST00000095899 ScribQ80U72 1612 aa14.97□□□□□ -0.01
Syne1-202ENSMUST00000095899 Rtl1Q7M732 1744 aa14.85□□□□□ -0.03
Syne1-202ENSMUST00000095899 Dcaf1Q80TR8 1506 aa14.61□□□□□ -0.07
Syne1-202ENSMUST00000095899 Rhox8Q6VSS7 320 aa14.6□□□□□ -0.07
Syne1-202ENSMUST00000095899 Ccdc180J3QNE4 1664 aa14.5□□□□□ -0.09
Syne1-202ENSMUST00000095899 Zcchc6Q5BLK4 1491 aaKnown RBP14.49□□□□□ -0.09
Syne1-202ENSMUST00000095899 Kdm5dQ62240 1548 aa14.47□□□□□ -0.09
Syne1-202ENSMUST00000095899 NacadQ5SWP3 1504 aa14.42□□□□□ -0.1
Syne1-202ENSMUST00000095899 Rb1cc1Q9ESK9 1588 aa14.33□□□□□ -0.12
Syne1-202ENSMUST00000095899 Baz1aO88379 1555 aa14.18□□□□□ -0.14
Syne1-202ENSMUST00000095899 Sycp2Q9CUU3 1500 aa14.14□□□□□ -0.15
Syne1-202ENSMUST00000095899 Crybg2B7ZCC2 1516 aa13.99□□□□□ -0.17
Syne1-202ENSMUST00000095899 BicraF8VPZ9 1578 aa13.95□□□□□ -0.18
Syne1-202ENSMUST00000095899 Smarca2Q6DIC0 1577 aa13.93□□□□□ -0.18
Syne1-202ENSMUST00000095899 HrcG5E8J6 738 aa13.71□□□□□ -0.21
Syne1-202ENSMUST00000095899 Ccdc136Q3TVA9 1136 aa13.65□□□□□ -0.22
Syne1-202ENSMUST00000095899 Cecr2E9Q2Z1 1453 aa13.54□□□□□ -0.24
Syne1-202ENSMUST00000095899 Synj1Q8CHC4 1574 aa13.43□□□□□ -0.26
Syne1-202ENSMUST00000095899 Rpgrip1Q9EPQ2 1331 aa13.42□□□□□ -0.26
Syne1-202ENSMUST00000095899 Smarca4Q3TKT4 1613 aaKnown RBP13.41□□□□□ -0.26
Syne1-202ENSMUST00000095899 Cep164Q5DU05 1446 aa13.4□□□□□ -0.26
Syne1-202ENSMUST00000095899 Trim41Q5NCC3 630 aa13.38□□□□□ -0.27
Syne1-202ENSMUST00000095899 Brd4Q9ESU6 1400 aaKnown RBP13.36□□□□□ -0.27
Syne1-202ENSMUST00000095899 Pds5bQ4VA53 1446 aaKnown RBP13.34□□□□□ -0.27
Syne1-202ENSMUST00000095899 Top2bQ64511 1612 aa13.33□□□□□ -0.28
Syne1-202ENSMUST00000095899 Rsf1E9PWW9 1441 aaKnown RBP13.31□□□□□ -0.28
Syne1-202ENSMUST00000095899 Atad2bE9Q166 1460 aaKnown RBP13.31□□□□□ -0.28
Syne1-202ENSMUST00000095899 CftrP26361 1476 aa13.31□□□□□ -0.28
Syne1-202ENSMUST00000095899 Thoc2B1AZI6 1594 aaKnown RBP13.28□□□□□ -0.28
Syne1-202ENSMUST00000095899 Iqgap2Q3UQ44 1575 aa13.28□□□□□ -0.28
Syne1-202ENSMUST00000095899 Cttnbp2B9EJA2 1648 aa13.28□□□□□ -0.28
Syne1-202ENSMUST00000095899 Golga3P55937 1487 aa13.27□□□□□ -0.29
Syne1-202ENSMUST00000095899 Acin1Q9JIX8 1338 aaKnown RBP13.25□□□□□ -0.29
Syne1-202ENSMUST00000095899 Ccdc88bQ4QRL3 1481 aa13.25□□□□□ -0.29
Syne1-202ENSMUST00000095899 Chic1Q8CBW7 227 aa13.19□□□□□ -0.3
Syne1-202ENSMUST00000095899 Cc2d2aQ8CFW7 1633 aa13.14□□□□□ -0.31
Syne1-202ENSMUST00000095899 Wdr62Q3U3T8 1523 aa13.13□□□□□ -0.31
Syne1-202ENSMUST00000095899 Unc13aQ4KUS2 1712 aa13.13□□□□□ -0.31
Syne1-202ENSMUST00000095899 Ehmt2Q9Z148 1263 aaKnown RBP13.08□□□□□ -0.32
Syne1-202ENSMUST00000095899 Frmpd1A2AKB4 1549 aa13.06□□□□□ -0.32
Syne1-202ENSMUST00000095899 Ercc6F8VPZ5 1481 aa13.06□□□□□ -0.32
Syne1-202ENSMUST00000095899 Fam135aQ6NS59 1506 aa13.01□□□□□ -0.33
Syne1-202ENSMUST00000095899 Cngb1E1AZ71 1325 aa12.99□□□□□ -0.33
Syne1-202ENSMUST00000095899 Top2aQ01320 1528 aaKnown RBP12.98□□□□□ -0.33
Syne1-202ENSMUST00000095899 TnnQ80Z71 1560 aa12.94□□□□□ -0.34
Syne1-202ENSMUST00000095899 Fmn1Q05860 1466 aa12.94□□□□□ -0.34
Syne1-202ENSMUST00000095899 Rapgef2Q8CHG7 1496 aa12.93□□□□□ -0.34
Syne1-202ENSMUST00000095899 Eif4g1Q6NZJ6 1600 aaKnown RBP12.92□□□□□ -0.34
Syne1-202ENSMUST00000095899 Baz1bQ9Z277 1479 aa12.87□□□□□ -0.35
Syne1-202ENSMUST00000095899 Dnajc5bQ9CQ94 199 aa12.84□□□□□ -0.35
Syne1-202ENSMUST00000095899 Phldb1Q6PDH0 1371 aaKnown RBP12.82□□□□□ -0.36
Syne1-202ENSMUST00000095899 Gab3Q8BSM5 595 aa12.81□□□□□ -0.36
Syne1-202ENSMUST00000095899 Lamc3Q9R0B6 1581 aa12.79□□□□□ -0.36
Syne1-202ENSMUST00000095899 Esf1Q3V1V3 845 aaKnown RBP12.77□□□□□ -0.36
Syne1-202ENSMUST00000095899 Cep162Q6ZQ06 1403 aa12.74□□□□□ -0.37
Syne1-202ENSMUST00000095899 Pcgf6Q99NA9 353 aa12.66□□□□□ -0.38
Syne1-202ENSMUST00000095899 NrkQ9R0G8 1455 aa12.64□□□□□ -0.39
Syne1-202ENSMUST00000095899 PtprkP35822 1457 aa12.63□□□□□ -0.39
Syne1-202ENSMUST00000095899 Camsap1A2AHC3 1581 aa12.61□□□□□ -0.39
Syne1-202ENSMUST00000095899 Arhgap35Q91YM2 1499 aa12.61□□□□□ -0.39
Syne1-202ENSMUST00000095899 Mrc2Q64449 1479 aa12.59□□□□□ -0.39
Syne1-202ENSMUST00000095899 Mier1Q5UAK0 511 aa12.58□□□□□ -0.4
Syne1-202ENSMUST00000095899 Kif15Q6P9L6 1387 aa12.56□□□□□ -0.4
Syne1-202ENSMUST00000095899 Ubl4bQ9CQ84 188 aa12.56□□□□□ -0.4
Syne1-202ENSMUST00000095899 Kif21aQ9QXL2 1672 aa12.53□□□□□ -0.4
Syne1-202ENSMUST00000095899 Shroom4Q1W617 1475 aa12.52□□□□□ -0.41
Syne1-202ENSMUST00000095899 Cux2P70298 1426 aa12.51□□□□□ -0.41
Syne1-202ENSMUST00000095899 Map3k1P53349 1493 aa12.49□□□□□ -0.41
Syne1-202ENSMUST00000095899 Grin2bQ01097 1482 aa12.49□□□□□ -0.41
Syne1-202ENSMUST00000095899 Supt5hO55201 1082 aaKnown RBP12.47□□□□□ -0.41
Syne1-202ENSMUST00000095899 Arap1Q4LDD4 1452 aa12.47□□□□□ -0.41
Syne1-202ENSMUST00000095899 Erich3F6QRE9 1637 aa12.47□□□□□ -0.41
Syne1-202ENSMUST00000095899 Ncapd3Q6ZQK0 1506 aa12.46□□□□□ -0.42
Syne1-202ENSMUST00000095899 Kdm5bQ80Y84 1544 aa12.44□□□□□ -0.42
Syne1-202ENSMUST00000095899 Ccdc18Q640L5 1455 aa12.44□□□□□ -0.42
Syne1-202ENSMUST00000095899 Arhgef5E9Q7D5 1581 aa12.43□□□□□ -0.42
Syne1-202ENSMUST00000095899 Mroh2bQ7M6Y6 1581 aa12.42□□□□□ -0.42
Syne1-202ENSMUST00000095899 NefmP08553 848 aa12.42□□□□□ -0.42
Syne1-202ENSMUST00000095899 Lrriq1Q0P5X1 1673 aa12.41□□□□□ -0.42
Syne1-202ENSMUST00000095899 Ankrd26Q811D2 1581 aa12.4□□□□□ -0.42
Syne1-202ENSMUST00000095899 Lmo7E9PYF4 1699 aaKnown RBP12.38□□□□□ -0.43
Syne1-202ENSMUST00000095899 AqrQ8CFQ3 1481 aaKnown RBP12.38□□□□□ -0.43
Syne1-202ENSMUST00000095899 Clip1Q922J3 1391 aa12.38□□□□□ -0.43
Syne1-202ENSMUST00000095899 Crocc2F6XLV1 1638 aa12.35□□□□□ -0.43
Syne1-202ENSMUST00000095899 Tiam1Q60610 1591 aa12.35□□□□□ -0.43
Syne1-202ENSMUST00000095899 TchhA0A0B4J1F9 1599 aa12.34□□□□□ -0.43
Syne1-202ENSMUST00000095899 PogzQ8BZH4 1409 aaKnown RBP12.33□□□□□ -0.44
Syne1-202ENSMUST00000095899 Eea1Q8BL66 1411 aa12.32□□□□□ -0.44
Syne1-202ENSMUST00000095899 LrpprcQ6PB66 1392 aaKnown RBP12.32□□□□□ -0.44
Syne1-202ENSMUST00000095899 Pcf11G3X9Z4 1553 aa12.31□□□□□ -0.44
Syne1-202ENSMUST00000095899 Myt1lP97500 1187 aa12.31□□□□□ -0.44
Syne1-202ENSMUST00000095899 UbtfP25976 765 aaKnown RBP12.3□□□□□ -0.44
Syne1-202ENSMUST00000095899 Slx4Q6P1D7 1565 aa12.3□□□□□ -0.44
Syne1-202ENSMUST00000095899 Setd1bQ8CFT2 1985 aa12.3□□□□□ -0.44
Syne1-202ENSMUST00000095899 Npm2Q80W85 207 aa12.28□□□□□ -0.44
Syne1-202ENSMUST00000095899 Cux1P53564 1515 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 95.3 ms