RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 PDR10P51533 1564 aa-3.34□□□□□ -2.94
snR55snR55 RSM19P53733 91 aaPredicted RBP-3.34□□□□□ -2.94
snR55snR55 TLG1Q03322 224 aa-3.34□□□□□ -2.94
snR55snR55 ATP17Q06405 101 aa-3.34□□□□□ -2.94
snR55snR55 YHL005CP38752 130 aa-3.35□□□□□ -2.95
snR55snR55 YBR200W-AQ3E755 54 aa-3.35□□□□□ -2.95
snR55snR55 NOP10Q6Q547 58 aaPredicted RBP-3.35□□□□□ -2.95
snR55snR55 HAP1P0CE41 1502 aa-3.35□□□□□ -2.95
snR55snR55 APC1P53886 1748 aa-3.36□□□□□ -2.95
snR55snR55 KOG1P38873 1557 aa-3.36□□□□□ -2.95
snR55snR55 YLR099W-AQ3E798 87 aa-3.37□□□□□ -2.95
snR55snR55 POL1P13382 1468 aa-3.37□□□□□ -2.95
snR55snR55 PDR11P40550 1411 aa-3.37□□□□□ -2.95
snR55snR55 LHP1P33399 275 aaKnown RBP-3.38□□□□□ -2.95
snR55snR55 YIL156W-BQ2V2P4 73 aa-3.38□□□□□ -2.95
snR55snR55 NHP2P32495 156 aaPredicted RBP-3.39□□□□□ -2.95
snR55snR55 SNU13P39990 126 aaKnown RBP-3.41□□□□□ -2.96
snR55snR55 YGR146C-AQ8TGT9 53 aa-3.41□□□□□ -2.96
snR55snR55 THO2P53552 1597 aaKnown RBP-3.42□□□□□ -2.96
snR55snR55 YLR146W-AQ2V2P1 62 aa-3.42□□□□□ -2.96
snR55snR55 RRT15Q3E811 62 aa-3.42□□□□□ -2.96
snR55snR55 YDL022C-AP0C5L6 82 aa-3.43□□□□□ -2.96
snR55snR55 FYV7Q12247 151 aa-3.43□□□□□ -2.96
snR55snR55 YKL068W-AQ3E826 78 aa-3.43□□□□□ -2.96
snR55snR55 HMRA1P0CY11 126 aa-3.44□□□□□ -2.96
snR55snR55 YDR042CQ03205 200 aa-3.44□□□□□ -2.96
snR55snR55 YOR011W-AQ3E807 68 aa-3.44□□□□□ -2.96
snR55snR55 YBL039W-BP0C268 59 aa-3.48□□□□□ -2.97
snR55snR55 YPL225WQ08971 146 aaKnown RBP-3.48□□□□□ -2.97
snR55snR55 QCR6P00127 147 aa-3.5□□□□□ -2.97
snR55snR55 DYN2Q02647 92 aa-3.5□□□□□ -2.97
snR55snR55 YOR192C-CQ3E736 78 aa-3.5□□□□□ -2.97
snR55snR55 VMA7P39111 118 aa-3.51□□□□□ -2.97
snR55snR55 RPA190P10964 1664 aaKnown RBP-3.53□□□□□ -2.97
snR55snR55 YMR090WQ04304 227 aaKnown RBP-3.55□□□□□ -2.98
snR55snR55 MHF2Q3E829 80 aa-3.55□□□□□ -2.98
snR55snR55 WIP1Q2V2P8 89 aa-3.56□□□□□ -2.98
snR55snR55 KSH1Q8TGJ3 72 aa-3.56□□□□□ -2.98
snR55snR55 GDB1Q06625 1536 aa-3.56□□□□□ -2.98
snR55snR55 YER039C-AP0CD97 72 aa-3.57□□□□□ -2.98
snR55snR55 YML054C-AQ3E809 52 aa-3.57□□□□□ -2.98
snR55snR55 FKS3Q04952 1785 aa-3.58□□□□□ -2.98
snR55snR55 SIN3P22579 1536 aa-3.58□□□□□ -2.98
snR55snR55 YOR314WQ12506 109 aa-3.6□□□□□ -2.99
snR55snR55 VPS13Q07878 3144 aa-3.6□□□□□ -2.99
snR55snR55 SPI1P40092 148 aa-3.62□□□□□ -2.99
snR55snR55 GEA1P47102 1408 aaPredicted RBP-3.62□□□□□ -2.99
snR55snR55 YOR032W-AQ8TGS1 66 aa-3.63□□□□□ -2.99
snR55snR55 YOR105WQ08504 108 aa-3.64□□□□□ -2.99
snR55snR55 SPP41P38904 1435 aa-3.66□□□□□ -3
snR55snR55 DNF1P32660 1571 aa-3.67□□□□□ -3
snR55snR55 YBR230W-AQ3E762 66 aa-3.67□□□□□ -3
snR55snR55 TIM12P32830 109 aa-3.68□□□□□ -3
snR55snR55 YMR082CQ04276 118 aa-3.68□□□□□ -3
snR55snR55 RPL29P05747 59 aaPredicted RBP-3.7□□□□□ -3
snR55snR55 YMR105W-AQ8TGS8 64 aa-3.7□□□□□ -3
snR55snR55 REV3P14284 1504 aa-3.7□□□□□ -3
snR55snR55 SWR1Q05471 1514 aa-3.7□□□□□ -3
snR55snR55 MSL1P40567 111 aaPredicted RBP-3.71□□□□□ -3
snR55snR55 SUS1Q6WNK7 96 aa-3.71□□□□□ -3
snR55snR55 SNQ2P32568 1501 aaKnown RBP-3.74□□□□□ -3.01
snR55snR55 YDR034C-AP0C289 58 aa-3.76□□□□□ -3.01
snR55snR55 YKL065W-AQ2V2P2 73 aa-3.76□□□□□ -3.01
snR55snR55 YGL194C-AQ2V2P6 80 aa-3.76□□□□□ -3.01
snR55snR55 YGR121W-AQ3E816 71 aa-3.76□□□□□ -3.01
snR55snR55 YGR035W-AQ45U48 73 aa-3.76□□□□□ -3.01
snR55snR55 YSP2Q06681 1438 aa-3.78□□□□□ -3.01
snR55snR55 YMR175W-AQ3E766 64 aa-3.78□□□□□ -3.01
snR55snR55 GEA2P39993 1459 aaKnown RBP-3.79□□□□□ -3.02
snR55snR55 YPR145C-AQ2V2P0 78 aa-3.79□□□□□ -3.02
snR55snR55 TSC11P40061 1430 aa-3.81□□□□□ -3.02
snR55snR55 PDR12Q02785 1511 aa-3.81□□□□□ -3.02
snR55snR55 TY1B-DR4Q07793 1604 aa-3.81□□□□□ -3.02
snR55snR55 QCR9P22289 66 aa-3.82□□□□□ -3.02
snR55snR55 SSS1P35179 80 aa-3.82□□□□□ -3.02
snR55snR55 YOR093CQ12275 1648 aa-3.82□□□□□ -3.02
snR55snR55 FLO1P32768 1537 aa-3.83□□□□□ -3.02
snR55snR55 PDR15Q04182 1529 aaKnown RBP-3.83□□□□□ -3.02
snR55snR55 ARO1P08566 1588 aaKnown RBP-3.85□□□□□ -3.02
snR55snR55 HUB1Q6Q546 73 aa-3.85□□□□□ -3.03
snR55snR55 DNF2Q12675 1612 aa-3.86□□□□□ -3.03
snR55snR55 MDS3P53094 1487 aa-3.86□□□□□ -3.03
snR55snR55 PAU7P39545 55 aa-3.88□□□□□ -3.03
snR55snR55 RPS30AP0CX33 63 aaKnown RBP-3.89□□□□□ -3.03
snR55snR55 RPS30BP0CX34 63 aaKnown RBP-3.89□□□□□ -3.03
snR55snR55 RPS12P48589 143 aaKnown RBP-3.9□□□□□ -3.03
snR55snR55 YOR304C-AO14468 76 aa-3.92□□□□□ -3.04
snR55snR55 SWM2P40342 146 aa-3.92□□□□□ -3.04
snR55snR55 YOR316C-AQ3E806 69 aa-3.92□□□□□ -3.04
snR55snR55 MMS22Q06164 1454 aa-3.92□□□□□ -3.04
snR55snR55 SSK2P53599 1579 aa-3.93□□□□□ -3.04
snR55snR55 YLR157W-DP0CE99 70 aa-3.93□□□□□ -3.04
snR55snR55 ESP1Q03018 1630 aa-3.95□□□□□ -3.04
snR55snR55 YHR073W-AP0C5N7 58 aa-3.95□□□□□ -3.04
snR55snR55 RPO31P04051 1460 aa-3.96□□□□□ -3.04
snR55snR55 BCK1Q01389 1478 aa-3.97□□□□□ -3.04
snR55snR55 RRP5Q05022 1729 aaKnown RBP-3.98□□□□□ -3.05
snR55snR55 ULS1Q08562 1619 aa-3.99□□□□□ -3.05
snR55snR55 IQG1Q12280 1495 aa-3.99□□□□□ -3.05
snR55snR55 ERI1P62651 68 aaKnown RBP-4□□□□□ -3.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms