RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W SMC4Q12267 1418 aa-2.35□□□□□ -2.79
HMRA1YCR097W YOR304C-AO14468 76 aa-2.38□□□□□ -2.79
HMRA1YCR097W REV3P14284 1504 aa-2.38□□□□□ -2.79
HMRA1YCR097W IRC20Q06554 1556 aa-2.39□□□□□ -2.79
HMRA1YCR097W TSC11P40061 1430 aa-2.4□□□□□ -2.79
HMRA1YCR097W YOR343CQ12484 108 aa-2.4□□□□□ -2.79
HMRA1YCR097W GEA2P39993 1459 aaKnown RBP-2.4□□□□□ -2.79
HMRA1YCR097W YIL156W-BQ2V2P4 73 aa-2.41□□□□□ -2.8
HMRA1YCR097W SUS1Q6WNK7 96 aa-2.41□□□□□ -2.8
HMRA1YCR097W YDR042CQ03205 200 aa-2.42□□□□□ -2.8
HMRA1YCR097W MSL1P40567 111 aaPredicted RBP-2.43□□□□□ -2.8
HMRA1YCR097W RPS12P48589 143 aaKnown RBP-2.43□□□□□ -2.8
HMRA1YCR097W SCP1Q08873 200 aa-2.43□□□□□ -2.8
HMRA1YCR097W YOR394C-AQ8TGJ0 55 aa-2.43□□□□□ -2.8
HMRA1YCR097W YDR524C-BQ3E6R4 66 aa-2.44□□□□□ -2.8
HMRA1YCR097W GDB1Q06625 1536 aa-2.44□□□□□ -2.8
HMRA1YCR097W RPA190P10964 1664 aaKnown RBP-2.47□□□□□ -2.8
HMRA1YCR097W COA2Q3E823 68 aa-2.47□□□□□ -2.8
HMRA1YCR097W YLR146W-AQ2V2P1 62 aa-2.48□□□□□ -2.81
HMRA1YCR097W YBR200W-AQ3E755 54 aa-2.48□□□□□ -2.81
HMRA1YCR097W UTP10P42945 1769 aaKnown RBP-2.51□□□□□ -2.81
HMRA1YCR097W YOR011W-AQ3E807 68 aa-2.51□□□□□ -2.81
HMRA1YCR097W YLL006W-AQ3E814 58 aa-2.51□□□□□ -2.81
HMRA1YCR097W YDL022C-AP0C5L6 82 aa-2.52□□□□□ -2.81
HMRA1YCR097W APC1P53886 1748 aa-2.52□□□□□ -2.81
HMRA1YCR097W TY3B-GQ99315 1547 aa-2.52□□□□□ -2.81
HMRA1YCR097W YOR105WQ08504 108 aa-2.53□□□□□ -2.81
HMRA1YCR097W KOG1P38873 1557 aa-2.53□□□□□ -2.82
HMRA1YCR097W YDR119W-AQ2V2P9 66 aa-2.54□□□□□ -2.82
HMRA1YCR097W ATP17Q06405 101 aa-2.56□□□□□ -2.82
HMRA1YCR097W YPL225WQ08971 146 aaKnown RBP-2.57□□□□□ -2.82
HMRA1YCR097W YGL258W-AQ3E740 77 aa-2.57□□□□□ -2.82
HMRA1YCR097W SWR1Q05471 1514 aa-2.58□□□□□ -2.82
HMRA1YCR097W YER137CP40083 148 aaKnown RBP-2.58□□□□□ -2.82
HMRA1YCR097W YKL065W-AQ2V2P2 73 aa-2.59□□□□□ -2.82
HMRA1YCR097W YBL039W-BP0C268 59 aa-2.6□□□□□ -2.83
HMRA1YCR097W YOR314WQ12506 109 aa-2.6□□□□□ -2.83
HMRA1YCR097W RPS27BP38711 82 aa-2.61□□□□□ -2.83
HMRA1YCR097W YMR175W-AQ3E766 64 aa-2.63□□□□□ -2.83
HMRA1YCR097W HAP1P0CE41 1502 aa-2.65□□□□□ -2.83
HMRA1YCR097W YOR072W-BQ3E832 53 aa-2.67□□□□□ -2.84
HMRA1YCR097W YGR146C-AQ8TGT9 53 aa-2.67□□□□□ -2.84
HMRA1YCR097W VPS15P22219 1454 aa-2.67□□□□□ -2.84
HMRA1YCR097W SIN3P22579 1536 aa-2.69□□□□□ -2.84
HMRA1YCR097W MDS3P53094 1487 aa-2.7□□□□□ -2.84
HMRA1YCR097W YCL001W-BQ96VH2 84 aa-2.7□□□□□ -2.84
HMRA1YCR097W YMR082CQ04276 118 aa-2.71□□□□□ -2.84
HMRA1YCR097W PDR10P51533 1564 aa-2.71□□□□□ -2.84
HMRA1YCR097W YPR145C-AQ2V2P0 78 aa-2.76□□□□□ -2.85
HMRA1YCR097W YOR032W-AQ8TGS1 66 aa-2.76□□□□□ -2.85
HMRA1YCR097W QCR9P22289 66 aa-2.77□□□□□ -2.85
HMRA1YCR097W YGR121W-AQ3E816 71 aa-2.77□□□□□ -2.85
HMRA1YCR097W YBR230W-AQ3E762 66 aa-2.78□□□□□ -2.85
HMRA1YCR097W YGR035W-AQ45U48 73 aa-2.79□□□□□ -2.86
HMRA1YCR097W SWM2P40342 146 aa-2.82□□□□□ -2.86
HMRA1YCR097W MMS22Q06164 1454 aa-2.84□□□□□ -2.86
HMRA1YCR097W CUP1-1P0CX80 61 aa-2.84□□□□□ -2.86
HMRA1YCR097W CUP1-2P0CX81 61 aa-2.84□□□□□ -2.86
HMRA1YCR097W PAU7P39545 55 aa-2.85□□□□□ -2.87
HMRA1YCR097W SSS1P35179 80 aa-2.86□□□□□ -2.87
HMRA1YCR097W ZEO1Q08245 113 aa-2.87□□□□□ -2.87
HMRA1YCR097W YCR075W-AQ3E830 75 aa-2.87□□□□□ -2.87
HMRA1YCR097W HUB1Q6Q546 73 aa-2.87□□□□□ -2.87
HMRA1YCR097W Q0017Q9ZZX8 53 aa-2.87□□□□□ -2.87
HMRA1YCR097W FIG2P25653 1609 aa-2.87□□□□□ -2.87
HMRA1YCR097W YSP2Q06681 1438 aa-2.87□□□□□ -2.87
HMRA1YCR097W SPI1P40092 148 aa-2.9□□□□□ -2.87
HMRA1YCR097W YGL194C-AQ2V2P6 80 aa-2.9□□□□□ -2.87
HMRA1YCR097W CWP2P43497 92 aa-2.95□□□□□ -2.88
HMRA1YCR097W LTE1P07866 1435 aa-2.95□□□□□ -2.88
HMRA1YCR097W YOR192C-CQ3E736 78 aa-2.96□□□□□ -2.88
HMRA1YCR097W DNF1P32660 1571 aa-3□□□□□ -2.89
HMRA1YCR097W TIM12P32830 109 aa-3.01□□□□□ -2.89
HMRA1YCR097W FKS3Q04952 1785 aa-3.02□□□□□ -2.89
HMRA1YCR097W THO2P53552 1597 aaKnown RBP-3.02□□□□□ -2.89
HMRA1YCR097W PDR12Q02785 1511 aa-3.06□□□□□ -2.9
HMRA1YCR097W ARO1P08566 1588 aaKnown RBP-3.07□□□□□ -2.9
HMRA1YCR097W ERI1P62651 68 aaKnown RBP-3.07□□□□□ -2.9
HMRA1YCR097W RPS30AP0CX33 63 aaKnown RBP-3.1□□□□□ -2.91
HMRA1YCR097W RPS30BP0CX34 63 aaKnown RBP-3.1□□□□□ -2.91
HMRA1YCR097W ESP1Q03018 1630 aa-3.11□□□□□ -2.91
HMRA1YCR097W YLR157W-DP0CE99 70 aa-3.11□□□□□ -2.91
HMRA1YCR097W YML054C-AQ3E809 52 aa-3.11□□□□□ -2.91
HMRA1YCR097W SNQ2P32568 1501 aaKnown RBP-3.11□□□□□ -2.91
HMRA1YCR097W MLP1Q02455 1875 aaKnown RBP-3.13□□□□□ -2.91
HMRA1YCR097W CSF1Q12150 2958 aa-3.14□□□□□ -2.91
HMRA1YCR097W IQG1Q12280 1495 aa-3.14□□□□□ -2.91
HMRA1YCR097W PDR15Q04182 1529 aaKnown RBP-3.17□□□□□ -2.92
HMRA1YCR097W NUM1Q00402 2748 aa-3.18□□□□□ -2.92
HMRA1YCR097W DNF2Q12675 1612 aa-3.19□□□□□ -2.92
HMRA1YCR097W BCK1Q01389 1478 aa-3.21□□□□□ -2.92
HMRA1YCR097W YOL131WQ08270 108 aa-3.22□□□□□ -2.92
HMRA1YCR097W ESC1Q03661 1658 aaKnown RBP-3.23□□□□□ -2.93
HMRA1YCR097W IML1P47170 1584 aa-3.24□□□□□ -2.93
HMRA1YCR097W TY1B-DR4Q07793 1604 aa-3.24□□□□□ -2.93
HMRA1YCR097W RPL29P05747 59 aaPredicted RBP-3.25□□□□□ -2.93
HMRA1YCR097W UFD4P33202 1483 aa-3.25□□□□□ -2.93
HMRA1YCR097W TRA1P38811 3744 aa-3.25□□□□□ -2.93
HMRA1YCR097W YOR093CQ12275 1648 aa-3.26□□□□□ -2.93
HMRA1YCR097W YDR034C-AP0C289 58 aa-3.26□□□□□ -2.93
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms