RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B RPA190P10964 1664 aaKnown RBP-3.17□□□□□ -2.92
HTL1YCR020W-B RPS12P48589 143 aaKnown RBP-3.18□□□□□ -2.92
HTL1YCR020W-B GEA2P39993 1459 aaKnown RBP-3.18□□□□□ -2.92
HTL1YCR020W-B UTP10P42945 1769 aaKnown RBP-3.18□□□□□ -2.92
HTL1YCR020W-B YDR042CQ03205 200 aa-3.19□□□□□ -2.92
HTL1YCR020W-B RPO21P04050 1733 aaKnown RBP-3.19□□□□□ -2.92
HTL1YCR020W-B YIL156W-BQ2V2P4 73 aa-3.21□□□□□ -2.92
HTL1YCR020W-B SMC4Q12267 1418 aa-3.22□□□□□ -2.93
HTL1YCR020W-B LSM2P38203 95 aaKnown RBP-3.23□□□□□ -2.93
HTL1YCR020W-B MSL1P40567 111 aaPredicted RBP-3.23□□□□□ -2.93
HTL1YCR020W-B OLI1P61829 76 aa-3.23□□□□□ -2.93
HTL1YCR020W-B SCP1Q08873 200 aa-3.23□□□□□ -2.93
HTL1YCR020W-B SUS1Q6WNK7 96 aa-3.23□□□□□ -2.93
HTL1YCR020W-B GDB1Q06625 1536 aa-3.24□□□□□ -2.93
HTL1YCR020W-B IRC20Q06554 1556 aa-3.25□□□□□ -2.93
HTL1YCR020W-B YOR394C-AQ8TGJ0 55 aa-3.32□□□□□ -2.94
HTL1YCR020W-B APC1P53886 1748 aa-3.34□□□□□ -2.94
HTL1YCR020W-B YDL022C-AP0C5L6 82 aa-3.35□□□□□ -2.95
HTL1YCR020W-B YOR343CQ12484 108 aa-3.35□□□□□ -2.95
HTL1YCR020W-B YBR200W-AQ3E755 54 aa-3.36□□□□□ -2.95
HTL1YCR020W-B YER137CP40083 148 aaKnown RBP-3.37□□□□□ -2.95
HTL1YCR020W-B YLR146W-AQ2V2P1 62 aa-3.4□□□□□ -2.95
HTL1YCR020W-B SWR1Q05471 1514 aa-3.43□□□□□ -2.96
HTL1YCR020W-B YOR105WQ08504 108 aa-3.43□□□□□ -2.96
HTL1YCR020W-B YOR011W-AQ3E807 68 aa-3.43□□□□□ -2.96
HTL1YCR020W-B YDR524C-BQ3E6R4 66 aa-3.44□□□□□ -2.96
HTL1YCR020W-B TY3B-GQ99315 1547 aa-3.46□□□□□ -2.96
HTL1YCR020W-B YMR175W-AQ3E766 64 aa-3.47□□□□□ -2.96
HTL1YCR020W-B YLL006W-AQ3E814 58 aa-3.48□□□□□ -2.97
HTL1YCR020W-B KOG1P38873 1557 aa-3.48□□□□□ -2.97
HTL1YCR020W-B ATP17Q06405 101 aa-3.49□□□□□ -2.97
HTL1YCR020W-B YKL065W-AQ2V2P2 73 aa-3.51□□□□□ -2.97
HTL1YCR020W-B COA2Q3E823 68 aa-3.52□□□□□ -2.97
HTL1YCR020W-B YBL039W-BP0C268 59 aa-3.54□□□□□ -2.98
HTL1YCR020W-B YOR314WQ12506 109 aa-3.54□□□□□ -2.98
HTL1YCR020W-B RPS27BP38711 82 aa-3.55□□□□□ -2.98
HTL1YCR020W-B PDR10P51533 1564 aa-3.56□□□□□ -2.98
HTL1YCR020W-B YMR082CQ04276 118 aa-3.57□□□□□ -2.98
HTL1YCR020W-B MDS3P53094 1487 aa-3.58□□□□□ -2.98
HTL1YCR020W-B YDR119W-AQ2V2P9 66 aa-3.58□□□□□ -2.98
HTL1YCR020W-B HAP1P0CE41 1502 aa-3.6□□□□□ -2.98
HTL1YCR020W-B SIN3P22579 1536 aa-3.6□□□□□ -2.98
HTL1YCR020W-B YPL225WQ08971 146 aaKnown RBP-3.6□□□□□ -2.99
HTL1YCR020W-B YGL258W-AQ3E740 77 aa-3.61□□□□□ -2.99
HTL1YCR020W-B YCL001W-BQ96VH2 84 aa-3.65□□□□□ -2.99
HTL1YCR020W-B YPR145C-AQ2V2P0 78 aa-3.68□□□□□ -3
HTL1YCR020W-B YGR146C-AQ8TGT9 53 aa-3.69□□□□□ -3
HTL1YCR020W-B YGR121W-AQ3E816 71 aa-3.71□□□□□ -3
HTL1YCR020W-B YOR032W-AQ8TGS1 66 aa-3.71□□□□□ -3
HTL1YCR020W-B YGR035W-AQ45U48 73 aa-3.73□□□□□ -3.01
HTL1YCR020W-B VPS15P22219 1454 aa-3.74□□□□□ -3.01
HTL1YCR020W-B QCR9P22289 66 aa-3.75□□□□□ -3.01
HTL1YCR020W-B YCR075W-AQ3E830 75 aa-3.79□□□□□ -3.02
HTL1YCR020W-B SWM2P40342 146 aa-3.81□□□□□ -3.02
HTL1YCR020W-B YOR072W-BQ3E832 53 aa-3.81□□□□□ -3.02
HTL1YCR020W-B ZEO1Q08245 113 aa-3.83□□□□□ -3.02
HTL1YCR020W-B MMS22Q06164 1454 aa-3.84□□□□□ -3.02
HTL1YCR020W-B YBR230W-AQ3E762 66 aa-3.85□□□□□ -3.03
HTL1YCR020W-B PAU7P39545 55 aa-3.89□□□□□ -3.03
HTL1YCR020W-B SSS1P35179 80 aa-3.91□□□□□ -3.04
HTL1YCR020W-B FKS3Q04952 1785 aa-3.94□□□□□ -3.04
HTL1YCR020W-B CWP2P43497 92 aa-3.94□□□□□ -3.04
HTL1YCR020W-B HUB1Q6Q546 73 aa-3.95□□□□□ -3.04
HTL1YCR020W-B YSP2Q06681 1438 aa-3.95□□□□□ -3.04
HTL1YCR020W-B SPI1P40092 148 aa-3.98□□□□□ -3.05
HTL1YCR020W-B LTE1P07866 1435 aa-3.98□□□□□ -3.05
HTL1YCR020W-B FIG2P25653 1609 aa-3.99□□□□□ -3.05
HTL1YCR020W-B MLP1Q02455 1875 aaKnown RBP-4.01□□□□□ -3.05
HTL1YCR020W-B CUP1-1P0CX80 61 aa-4.03□□□□□ -3.05
HTL1YCR020W-B CUP1-2P0CX81 61 aa-4.03□□□□□ -3.05
HTL1YCR020W-B TIM12P32830 109 aa-4.03□□□□□ -3.05
HTL1YCR020W-B YGL194C-AQ2V2P6 80 aa-4.03□□□□□ -3.05
HTL1YCR020W-B Q0017Q9ZZX8 53 aa-4.07□□□□□ -3.06
HTL1YCR020W-B ARO1P08566 1588 aaKnown RBP-4.1□□□□□ -3.07
HTL1YCR020W-B ERI1P62651 68 aaKnown RBP-4.14□□□□□ -3.07
HTL1YCR020W-B ESP1Q03018 1630 aa-4.15□□□□□ -3.07
HTL1YCR020W-B CSF1Q12150 2958 aa-4.16□□□□□ -3.08
HTL1YCR020W-B DNF1P32660 1571 aa-4.17□□□□□ -3.08
HTL1YCR020W-B THO2P53552 1597 aaKnown RBP-4.19□□□□□ -3.08
HTL1YCR020W-B PDR12Q02785 1511 aa-4.2□□□□□ -3.08
HTL1YCR020W-B ESC1Q03661 1658 aaKnown RBP-4.2□□□□□ -3.08
HTL1YCR020W-B RPS30AP0CX33 63 aaKnown RBP-4.22□□□□□ -3.08
HTL1YCR020W-B RPS30BP0CX34 63 aaKnown RBP-4.22□□□□□ -3.08
HTL1YCR020W-B YOR192C-CQ3E736 78 aa-4.22□□□□□ -3.08
HTL1YCR020W-B IQG1Q12280 1495 aa-4.27□□□□□ -3.09
HTL1YCR020W-B YLR157W-DP0CE99 70 aa-4.28□□□□□ -3.09
HTL1YCR020W-B SNQ2P32568 1501 aaKnown RBP-4.28□□□□□ -3.09
HTL1YCR020W-B DNF2Q12675 1612 aa-4.28□□□□□ -3.1
HTL1YCR020W-B TRA1P38811 3744 aa-4.33□□□□□ -3.1
HTL1YCR020W-B PDR15Q04182 1529 aaKnown RBP-4.35□□□□□ -3.11
HTL1YCR020W-B RRP5Q05022 1729 aaKnown RBP-4.35□□□□□ -3.11
HTL1YCR020W-B YOL131WQ08270 108 aa-4.39□□□□□ -3.11
HTL1YCR020W-B UFD4P33202 1483 aa-4.39□□□□□ -3.11
HTL1YCR020W-B IML1P47170 1584 aa-4.4□□□□□ -3.11
HTL1YCR020W-B BCK1Q01389 1478 aa-4.4□□□□□ -3.11
HTL1YCR020W-B YOL166W-AQ8TGJ1 51 aa-4.41□□□□□ -3.12
HTL1YCR020W-B YML054C-AQ3E809 52 aa-4.42□□□□□ -3.12
HTL1YCR020W-B TY1B-DR4Q07793 1604 aa-4.43□□□□□ -3.12
HTL1YCR020W-B YOR093CQ12275 1648 aa-4.46□□□□□ -3.12
HTL1YCR020W-B NUM1Q00402 2748 aa-4.51□□□□□ -3.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms