RNA–Protein interactions for RNA: YNL008C

ASI3, Transcript of Subunit of the nuclear inner membrane Asi ubiquitin ligase complex, yeast

Gene ASI3, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASI3	YNL008C	TCB3	Q03640	1545 aa	Known RBP	0.82	□□□□□ -2.28
ASI3	YNL008C	YCR101C	P25607	182 aa		0.82	□□□□□ -2.28
ASI3	YNL008C	SRB6	P32570	121 aa		0.82	□□□□□ -2.28
ASI3	YNL008C	IMP2	P46972	177 aa		0.82	□□□□□ -2.28
ASI3	YNL008C	SEC7	P11075	2009 aa	Known RBP	0.82	□□□□□ -2.28
ASI3	YNL008C	TY1B-DR4	Q07793	1604 aa		0.82	□□□□□ -2.28
ASI3	YNL008C	YMR090W	Q04304	227 aa	Known RBP	0.81	□□□□□ -2.28
ASI3	YNL008C	TSC11	P40061	1430 aa		0.81	□□□□□ -2.28
ASI3	YNL008C	MDS3	P53094	1487 aa		0.81	□□□□□ -2.28
ASI3	YNL008C	UBC4	P15731	148 aa		0.81	□□□□□ -2.28
ASI3	YNL008C	KRE5	P22023	1365 aa		0.81	□□□□□ -2.28
ASI3	YNL008C	BUD4	P47136	1447 aa		0.81	□□□□□ -2.28
ASI3	YNL008C	YLR419W	Q06698	1435 aa	Known RBP	0.81	□□□□□ -2.28
ASI3	YNL008C	URB1	P34241	1764 aa	Known RBP	0.8	□□□□□ -2.28
ASI3	YNL008C	REV3	P14284	1504 aa		0.8	□□□□□ -2.28
ASI3	YNL008C	SKI3	P17883	1432 aa	Known RBP	0.8	□□□□□ -2.28
ASI3	YNL008C	UBC5	P15732	148 aa		0.8	□□□□□ -2.28
ASI3	YNL008C	YBR090C	P38253	122 aa		0.8	□□□□□ -2.28
ASI3	YNL008C	BPT1	P14772	1559 aa		0.79	□□□□□ -2.28
ASI3	YNL008C	HIR3	P47171	1648 aa		0.79	□□□□□ -2.28
ASI3	YNL008C	XRN1	P22147	1528 aa	Known RBP	0.78	□□□□□ -2.28
ASI3	YNL008C	BRR2	P32639	2163 aa	Known RBP	0.78	□□□□□ -2.28
ASI3	YNL008C	SHU1	P38751	150 aa		0.78	□□□□□ -2.28
ASI3	YNL008C	GCV3	P39726	170 aa	Predicted RBP	0.78	□□□□□ -2.28
ASI3	YNL008C	YPL038W-A	Q3E7B4	63 aa		0.78	□□□□□ -2.28
ASI3	YNL008C	CCW14	O13547	238 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	YIL086C	P40503	102 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	YDR210W	Q03482	75 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	VPS13	Q07878	3144 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	TOM1	Q03280	3268 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	MMS1	Q06211	1407 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	PEP1	P32319	1579 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	THO2	P53552	1597 aa	Known RBP	0.77	□□□□□ -2.29
ASI3	YNL008C	YCF1	P39109	1515 aa	Known RBP	0.77	□□□□□ -2.29
ASI3	YNL008C	YHR173C	P38864	112 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	PAU5	P43575	122 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	FYV7	Q12247	151 aa		0.77	□□□□□ -2.29
ASI3	YNL008C	UFD4	P33202	1483 aa		0.76	□□□□□ -2.29
ASI3	YNL008C	RSM19	P53733	91 aa	Predicted RBP	0.76	□□□□□ -2.29
ASI3	YNL008C	YCR095W-A	Q3E787	52 aa		0.76	□□□□□ -2.29
ASI3	YNL008C	YRF1-6	P53819	1859 aa		0.76	□□□□□ -2.29
ASI3	YNL008C	BNI1	P41832	1953 aa		0.76	□□□□□ -2.29
ASI3	YNL008C	BLM10	P43583	2143 aa		0.76	□□□□□ -2.29
ASI3	YNL008C	YBR072C-A	Q3E794	53 aa		0.76	□□□□□ -2.29
ASI3	YNL008C	TOP2	P06786	1428 aa	Known RBP	0.75	□□□□□ -2.29
ASI3	YNL008C	LTE1	P07866	1435 aa		0.75	□□□□□ -2.29
ASI3	YNL008C	DNF1	P32660	1571 aa		0.75	□□□□□ -2.29
ASI3	YNL008C	ATG2	P53855	1592 aa		0.75	□□□□□ -2.29
ASI3	YNL008C	CDC25	P04821	1589 aa		0.75	□□□□□ -2.29
ASI3	YNL008C	YDR010C	Q12426	110 aa		0.75	□□□□□ -2.29
ASI3	YNL008C	GEA2	P39993	1459 aa	Known RBP	0.75	□□□□□ -2.29
ASI3	YNL008C	KSH1	Q8TGJ3	72 aa		0.74	□□□□□ -2.29
ASI3	YNL008C	RPA190	P10964	1664 aa	Known RBP	0.74	□□□□□ -2.29
ASI3	YNL008C	SNA2	P56508	79 aa		0.74	□□□□□ -2.29
ASI3	YNL008C	MIX14	Q04341	121 aa		0.74	□□□□□ -2.29
ASI3	YNL008C	POL2	P21951	2222 aa	Known RBP	0.74	□□□□□ -2.29
ASI3	YNL008C	SSK2	P53599	1579 aa		0.73	□□□□□ -2.29
ASI3	YNL008C	PDR11	P40550	1411 aa		0.73	□□□□□ -2.29
ASI3	YNL008C	MPC2	P38857	129 aa		0.73	□□□□□ -2.29
ASI3	YNL008C	YOL164W-A	Q3E7A5	60 aa		0.73	□□□□□ -2.29
ASI3	YNL008C	RPO31	P04051	1460 aa		0.73	□□□□□ -2.29
ASI3	YNL008C	SCC2	Q04002	1493 aa		0.73	□□□□□ -2.29
ASI3	YNL008C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.73	□□□□□ -2.29
ASI3	YNL008C	ESC1	Q03661	1658 aa	Known RBP	0.73	□□□□□ -2.29
ASI3	YNL008C	PAU6	P0CE90	120 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	PAU18	P0CE91	120 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	ROX3	P25046	220 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	COX12	Q01519	83 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	VPS15	P22219	1454 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	RKR1	Q04781	1562 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	SNF2	P22082	1703 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	IRC20	Q06554	1556 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	NUP159	P40477	1460 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	MRX7	P53869	86 aa		0.72	□□□□□ -2.29
ASI3	YNL008C	MMS22	Q06164	1454 aa		0.71	□□□□□ -2.3
ASI3	YNL008C	NUM1	Q00402	2748 aa		0.71	□□□□□ -2.3
ASI3	YNL008C	COX19	Q3E731	98 aa		0.71	□□□□□ -2.3
ASI3	YNL008C	DNF2	Q12675	1612 aa		0.71	□□□□□ -2.3
ASI3	YNL008C	YOR289W	Q12012	251 aa	Predicted RBP	0.71	□□□□□ -2.3
ASI3	YNL008C	SSN2	P38931	1420 aa		0.7	□□□□□ -2.3
ASI3	YNL008C	GEA1	P47102	1408 aa	Predicted RBP	0.7	□□□□□ -2.3
ASI3	YNL008C	YSP2	Q06681	1438 aa		0.7	□□□□□ -2.3
ASI3	YNL008C	TY4B-H	P0C2J7	1802 aa		0.7	□□□□□ -2.3
ASI3	YNL008C	YOR093C	Q12275	1648 aa		0.7	□□□□□ -2.3
ASI3	YNL008C	YNR034W-A	Q3E841	98 aa		0.7	□□□□□ -2.3
ASI3	YNL008C	SRB8	P25648	1427 aa		0.7	□□□□□ -2.3
ASI3	YNL008C	ESP1	Q03018	1630 aa		0.7	□□□□□ -2.3
ASI3	YNL008C	DOP1	Q03921	1698 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	NUP170	P38181	1502 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	HMRA1	P0CY11	126 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	YRF1-1	P0CX20	1796 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	YRF1-5	P0CX21	1796 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	YRF1-8	P0CX22	1796 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	SIN3	P22579	1536 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	PDR10	P51533	1564 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	TY2B-LR1	P0C2J3	1770 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	TY2B-F	P0CX63	1770 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	TY2B-GR2	P0CX64	1770 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	TY2B-C	P25384	1770 aa		0.69	□□□□□ -2.3
ASI3	YNL008C	TY2B-DR2	Q03494	1770 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms