RNA–Protein interactions for RNA: YCR024C-A

PMP1, Transcript of Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p, yeast

Gene PMP1, Length 123 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMP1	YCR024C-A	YHR138C	P38841	114 aa	Predicted RBP	-0.05	□□□□□ -2.42
PMP1	YCR024C-A	VMA21	P41806	77 aa		-0.05	□□□□□ -2.42
PMP1	YCR024C-A	COX12	Q01519	83 aa		-0.05	□□□□□ -2.42
PMP1	YCR024C-A	RTR2	Q12378	196 aa		-0.05	□□□□□ -2.42
PMP1	YCR024C-A	DNA2	P38859	1522 aa		-0.05	□□□□□ -2.42
PMP1	YCR024C-A	SEN1	Q00416	2231 aa	Known RBP	-0.06	□□□□□ -2.42
PMP1	YCR024C-A	RPS11A	P0CX47	156 aa	Known RBP	-0.06	□□□□□ -2.42
PMP1	YCR024C-A	RPS11B	P0CX48	156 aa	Known RBP	-0.06	□□□□□ -2.42
PMP1	YCR024C-A	ATX1	P38636	73 aa		-0.06	□□□□□ -2.42
PMP1	YCR024C-A	YAR029W	P39549	74 aa		-0.06	□□□□□ -2.42
PMP1	YCR024C-A	YCR101C	P25607	182 aa		-0.07	□□□□□ -2.42
PMP1	YCR024C-A	YBR292C	P38357	123 aa		-0.07	□□□□□ -2.42
PMP1	YCR024C-A	YLR042C	Q07990	161 aa		-0.07	□□□□□ -2.42
PMP1	YCR024C-A	YPL038W-A	Q3E7B4	63 aa		-0.07	□□□□□ -2.42
PMP1	YCR024C-A	YOS1	Q3E834	85 aa		-0.07	□□□□□ -2.42
PMP1	YCR024C-A	RIM15	P43565	1770 aa		-0.08	□□□□□ -2.42
PMP1	YCR024C-A	MRPL38	P35996	138 aa	Predicted RBP	-0.08	□□□□□ -2.42
PMP1	YCR024C-A	YBR016W	P38216	128 aa		-0.08	□□□□□ -2.42
PMP1	YCR024C-A	PAU15	P40585	124 aa		-0.08	□□□□□ -2.42
PMP1	YCR024C-A	BPT1	P14772	1559 aa		-0.08	□□□□□ -2.42
PMP1	YCR024C-A	RPO41	P13433	1351 aa	Known RBP	-0.08	□□□□□ -2.42
PMP1	YCR024C-A	SRB8	P25648	1427 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	SPP41	P38904	1435 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	SSN2	P38931	1420 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	MRP17	P28778	131 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	RPA12	P32529	125 aa	Known RBP	-0.09	□□□□□ -2.42
PMP1	YCR024C-A	SRB6	P32570	121 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	PAU16	P35994	123 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	ICY1	Q04329	127 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	WIP1	Q2V2P8	89 aa		-0.09	□□□□□ -2.42
PMP1	YCR024C-A	YER039C-A	P0CD97	72 aa		-0.1	□□□□□ -2.43
PMP1	YCR024C-A	YNL198C	P40166	100 aa		-0.1	□□□□□ -2.43
PMP1	YCR024C-A	MRX7	P53869	86 aa		-0.1	□□□□□ -2.43
PMP1	YCR024C-A	TY1B-BL	Q12490	1755 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	UTP20	P35194	2493 aa	Known RBP	-0.11	□□□□□ -2.43
PMP1	YCR024C-A	UBC4	P15731	148 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	UBC5	P15732	148 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	BUD23	P25627	275 aa	Predicted RBP	-0.11	□□□□□ -2.43
PMP1	YCR024C-A	RSM18	P40033	138 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	GNA1	P43577	159 aa	Predicted RBP	-0.11	□□□□□ -2.43
PMP1	YCR024C-A	RUB1	Q03919	77 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	MIC10	Q96VH5	97 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	LYS2	P07702	1392 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	YRF1-2	P40105	1681 aa		-0.11	□□□□□ -2.43
PMP1	YCR024C-A	YOR304C-A	O14468	76 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	YFR009W-A	P0C5M9	85 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	AIM19	P40502	157 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	SNA2	P56508	79 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	MIX14	Q04341	121 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	YMR103C	Q04436	120 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	YCR095W-A	Q3E787	52 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	NTE1	Q04958	1679 aa		-0.12	□□□□□ -2.43
PMP1	YCR024C-A	TY3B-I	Q7LHG5	1498 aa	Known RBP	-0.13	□□□□□ -2.43
PMP1	YCR024C-A	KRE5	P22023	1365 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	ROX3	P25046	220 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	PDX3	P38075	228 aa	Known RBP	-0.13	□□□□□ -2.43
PMP1	YCR024C-A	YBR090C	P38253	122 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	YHL005C	P38752	130 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	RPC10	P40422	70 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	YMR090W	Q04304	227 aa	Known RBP	-0.13	□□□□□ -2.43
PMP1	YCR024C-A	PAU20	Q08322	120 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	CAT8	P39113	1433 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	TSC11	P40061	1430 aa		-0.13	□□□□□ -2.43
PMP1	YCR024C-A	GEA1	P47102	1408 aa	Predicted RBP	-0.13	□□□□□ -2.43
PMP1	YCR024C-A	RPL38	P49167	78 aa	Known RBP	-0.14	□□□□□ -2.43
PMP1	YCR024C-A	YNR034W-A	Q3E841	98 aa		-0.14	□□□□□ -2.43
PMP1	YCR024C-A	PAU6	P0CE90	120 aa		-0.15	□□□□□ -2.43
PMP1	YCR024C-A	PAU18	P0CE91	120 aa		-0.15	□□□□□ -2.43
PMP1	YCR024C-A	COX7	P10174	60 aa		-0.15	□□□□□ -2.43
PMP1	YCR024C-A	LHP1	P33399	275 aa	Known RBP	-0.15	□□□□□ -2.43
PMP1	YCR024C-A	PAU5	P43575	122 aa		-0.15	□□□□□ -2.43
PMP1	YCR024C-A	RPS12	P48589	143 aa	Known RBP	-0.15	□□□□□ -2.43
PMP1	YCR024C-A	SGF11	Q03067	99 aa		-0.15	□□□□□ -2.43
PMP1	YCR024C-A	KSH1	Q8TGJ3	72 aa		-0.15	□□□□□ -2.43
PMP1	YCR024C-A	RSF2	P46974	1380 aa		-0.16	□□□□□ -2.43
PMP1	YCR024C-A	YJR107C-A	P0CT86	78 aa		-0.16	□□□□□ -2.44
PMP1	YCR024C-A	YBL071C	P38185	102 aa		-0.16	□□□□□ -2.44
PMP1	YCR024C-A	EMC5	P40540	141 aa		-0.16	□□□□□ -2.44
PMP1	YCR024C-A	YGR025W	P53216	100 aa		-0.16	□□□□□ -2.44
PMP1	YCR024C-A	YNL042W-B	Q3E7Z2	85 aa		-0.16	□□□□□ -2.44
PMP1	YCR024C-A	BPH1	P25356	2167 aa		-0.16	□□□□□ -2.44
PMP1	YCR024C-A	PAU1	P0CE88	120 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	PAU14	P0CE89	120 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	PAU8	P0CE92	120 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	PAU11	P0CE93	120 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	PAU13	P38725	120 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	BUD4	P47136	1447 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	RSM19	P53733	91 aa	Predicted RBP	-0.17	□□□□□ -2.44
PMP1	YCR024C-A	PAU10	Q03050	120 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	PAU9	Q3E770	120 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	YRF1-1	P0CX20	1796 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	YRF1-5	P0CX21	1796 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	YRF1-8	P0CX22	1796 aa		-0.17	□□□□□ -2.44
PMP1	YCR024C-A	HMRA1	P0CY11	126 aa		-0.18	□□□□□ -2.44
PMP1	YCR024C-A	PAU4	P53427	120 aa		-0.18	□□□□□ -2.44
PMP1	YCR024C-A	YOR289W	Q12012	251 aa	Predicted RBP	-0.18	□□□□□ -2.44
PMP1	YCR024C-A	GEA2	P39993	1459 aa	Known RBP	-0.18	□□□□□ -2.44
PMP1	YCR024C-A	MDS3	P53094	1487 aa		-0.18	□□□□□ -2.44
PMP1	YCR024C-A	RGI1	P40043	161 aa	Predicted RBP	-0.19	□□□□□ -2.44
PMP1	YCR024C-A	SPC1	P46965	94 aa		-0.19	□□□□□ -2.44

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms