RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W SNF4P12904 322 aa3.91□□□□□ -1.78
ABF1YKL112W GLC7P32598 312 aaKnown RBP3.91□□□□□ -1.78
ABF1YKL112W UTR5P32630 166 aa3.91□□□□□ -1.78
ABF1YKL112W PAM17P36147 197 aa3.91□□□□□ -1.78
ABF1YKL112W MRPL11P36521 249 aaPredicted RBP3.91□□□□□ -1.78
ABF1YKL112W GPI2P46961 280 aa3.91□□□□□ -1.78
ABF1YKL112W GRX5Q02784 150 aa3.91□□□□□ -1.78
ABF1YKL112W YPL039WQ03080 316 aa3.91□□□□□ -1.78
ABF1YKL112W RRG7Q08774 242 aaPredicted RBP3.91□□□□□ -1.78
ABF1YKL112W MPD1Q12404 318 aaKnown RBP3.91□□□□□ -1.78
ABF1YKL112W HEM2P05373 342 aa3.9□□□□□ -1.78
ABF1YKL112W HSP26P15992 214 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
ABF1YKL112W FHN1P53279 174 aa3.9□□□□□ -1.78
ABF1YKL112W YGR164WP53291 111 aa3.9□□□□□ -1.78
ABF1YKL112W LSM7P53905 115 aaKnown RBP3.9□□□□□ -1.78
ABF1YKL112W FIT1Q04433 528 aa3.9□□□□□ -1.78
ABF1YKL112W DDP1Q99321 188 aaKnown RBP3.9□□□□□ -1.78
ABF1YKL112W DYN1P36022 4092 aa3.9□□□□□ -1.78
ABF1YKL112W YCR006CP25350 157 aa3.9□□□□□ -1.79
ABF1YKL112W ARN2P38724 620 aa3.9□□□□□ -1.79
ABF1YKL112W YJL213WP40896 331 aa3.9□□□□□ -1.79
ABF1YKL112W RNH201P53942 307 aa3.9□□□□□ -1.79
ABF1YKL112W ROT1Q03691 256 aa3.9□□□□□ -1.79
ABF1YKL112W PAU23Q07987 124 aa3.9□□□□□ -1.79
ABF1YKL112W PAU17Q12370 124 aa3.9□□□□□ -1.79
ABF1YKL112W VMA9Q3E7B6 73 aa3.9□□□□□ -1.79
ABF1YKL112W ECM12O13529 151 aa3.89□□□□□ -1.79
ABF1YKL112W RPL16BP26785 198 aaKnown RBP3.89□□□□□ -1.79
ABF1YKL112W CNE1P27825 502 aa3.89□□□□□ -1.79
ABF1YKL112W YRA2P36036 203 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
ABF1YKL112W UBC13P52490 153 aa3.89□□□□□ -1.79
ABF1YKL112W SCW11P53189 542 aa3.89□□□□□ -1.79
ABF1YKL112W ALG9P53868 555 aaKnown RBP3.89□□□□□ -1.79
ABF1YKL112W PGA1P53896 198 aa3.89□□□□□ -1.79
ABF1YKL112W PIN3Q06449 215 aa3.89□□□□□ -1.79
ABF1YKL112W SNX3Q08826 162 aaKnown RBP3.89□□□□□ -1.79
ABF1YKL112W KSH1Q8TGJ3 72 aa3.89□□□□□ -1.79
ABF1YKL112W MRP10O75012 95 aa3.89□□□□□ -1.79
ABF1YKL112W RPS25BP0C0T4 108 aaKnown RBP3.89□□□□□ -1.79
ABF1YKL112W GAT4P40569 121 aa3.89□□□□□ -1.79
ABF1YKL112W YMR252CQ04814 134 aa3.89□□□□□ -1.79
ABF1YKL112W YDL180WQ12301 547 aa3.89□□□□□ -1.79
ABF1YKL112W RPS25AQ3E792 108 aaPredicted RBP3.89□□□□□ -1.79
ABF1YKL112W YHR214C-EQ8TGK0 99 aa3.89□□□□□ -1.79
ABF1YKL112W MED11Q99278 115 aa3.89□□□□□ -1.79
ABF1YKL112W APS1P35181 156 aa3.88□□□□□ -1.79
ABF1YKL112W MRP21P38175 177 aa3.88□□□□□ -1.79
ABF1YKL112W MPM1P40364 252 aa3.88□□□□□ -1.79
ABF1YKL112W MSL1P40567 111 aaPredicted RBP3.88□□□□□ -1.79
ABF1YKL112W OST1P41543 476 aaKnown RBP3.88□□□□□ -1.79
ABF1YKL112W VMA21P41806 77 aa3.88□□□□□ -1.79
ABF1YKL112W KEG1P43614 200 aa3.88□□□□□ -1.79
ABF1YKL112W ERV29P53337 310 aa3.88□□□□□ -1.79
ABF1YKL112W YPR174CQ06616 221 aaPredicted RBP3.88□□□□□ -1.79
ABF1YKL112W YPL264CQ08980 353 aa3.88□□□□□ -1.79
ABF1YKL112W CDC5P32562 705 aa3.87□□□□□ -1.79
ABF1YKL112W MTR2P34232 184 aaKnown RBP3.87□□□□□ -1.79
ABF1YKL112W CTP1P38152 299 aa3.87□□□□□ -1.79
ABF1YKL112W POP8P38208 133 aa3.87□□□□□ -1.79
ABF1YKL112W WWM1P43582 211 aaKnown RBP3.87□□□□□ -1.79
ABF1YKL112W VHT1P53241 593 aa3.87□□□□□ -1.79
ABF1YKL112W SPG4Q04438 115 aa3.87□□□□□ -1.79
ABF1YKL112W EAF3Q12432 401 aa3.87□□□□□ -1.79
ABF1YKL112W MRS4P23500 304 aa3.87□□□□□ -1.79
ABF1YKL112W FUN19P28003 413 aaPredicted RBP3.87□□□□□ -1.79
ABF1YKL112W SHE1P38200 338 aa3.87□□□□□ -1.79
ABF1YKL112W ANS1P38832 159 aa3.87□□□□□ -1.79
ABF1YKL112W YER181CP40097 107 aa3.87□□□□□ -1.79
ABF1YKL112W CYB5P40312 120 aa3.87□□□□□ -1.79
ABF1YKL112W GAT3Q07928 141 aa3.87□□□□□ -1.79
ABF1YKL112W TSC3Q3E790 80 aa3.87□□□□□ -1.79
ABF1YKL112W MHF1Q3E835 90 aa3.87□□□□□ -1.79
ABF1YKL112W TAD3Q9URQ3 322 aa3.87□□□□□ -1.79
ABF1YKL112W RAS2P01120 322 aaKnown RBP3.86□□□□□ -1.79
ABF1YKL112W Q0255P03881 472 aa3.86□□□□□ -1.79
ABF1YKL112W RPL22AP05749 121 aaKnown RBP3.86□□□□□ -1.79
ABF1YKL112W YJL218WP40892 196 aaKnown RBP3.86□□□□□ -1.79
ABF1YKL112W NMA1Q06178 401 aaKnown RBP3.86□□□□□ -1.79
ABF1YKL112W YDL242WQ07746 117 aa3.86□□□□□ -1.79
ABF1YKL112W TIM18Q08749 192 aa3.86□□□□□ -1.79
ABF1YKL112W CDC39P25655 2108 aaKnown RBP3.86□□□□□ -1.79
ABF1YKL112W TRP1P00912 224 aa3.86□□□□□ -1.79
ABF1YKL112W HEM4P06174 275 aa3.86□□□□□ -1.79
ABF1YKL112W YGL010WP25338 174 aa3.86□□□□□ -1.79
ABF1YKL112W URA10P30402 227 aa3.86□□□□□ -1.79
ABF1YKL112W SFT2P38166 215 aa3.86□□□□□ -1.79
ABF1YKL112W YBR032WP38223 100 aa3.86□□□□□ -1.79
ABF1YKL112W YHR138CP38841 114 aaPredicted RBP3.86□□□□□ -1.79
ABF1YKL112W PEX17P40155 199 aa3.86□□□□□ -1.79
ABF1YKL112W FLX1P40464 311 aa3.86□□□□□ -1.79
ABF1YKL112W YMR090WQ04304 227 aaKnown RBP3.86□□□□□ -1.79
ABF1YKL112W RAF1Q06891 181 aa3.86□□□□□ -1.79
ABF1YKL112W JID1Q12350 301 aa3.86□□□□□ -1.79
ABF1YKL112W YHR139C-AO13536 103 aa3.85□□□□□ -1.79
ABF1YKL112W CKS1P20486 150 aaKnown RBP3.85□□□□□ -1.79
ABF1YKL112W YCR085WP25650 117 aa3.85□□□□□ -1.79
ABF1YKL112W SMP1P38128 452 aa3.85□□□□□ -1.79
ABF1YKL112W GPX2P38143 162 aa3.85□□□□□ -1.79
ABF1YKL112W GGC1P38988 300 aa3.85□□□□□ -1.79
ABF1YKL112W YNL198CP40166 100 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms