Protein–RNA interactions for Protein: Q3E7B6

VMA9, V-type proton ATPase subunit e, yeastyeast

Predictions only

Length 73 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA9Q3E7B6 NSR1YGR159C 1245 nt16.3■□□□□ 0.2
VMA9Q3E7B6 YML009W-BYML009W-B 477 nt15.79■□□□□ 0.12
VMA9Q3E7B6 MDJ1YFL016C 1536 nt15.26■□□□□ 0.03
VMA9Q3E7B6 NOP1YDL014W 984 nt15□□□□□ -0.01
VMA9Q3E7B6 YJL027CYJL027C 417 nt13.96□□□□□ -0.17
VMA9Q3E7B6 SSA3YBL075C 1950 nt13.6□□□□□ -0.23
VMA9Q3E7B6 DBP2YNL112W 1641 nt13.18□□□□□ -0.3
VMA9Q3E7B6 YKL036CYKL036C 393 nt13.16□□□□□ -0.3
VMA9Q3E7B6 YBR190WYBR190W 312 nt13.16□□□□□ -0.3
VMA9Q3E7B6 SRX1YKL086W 384 nt13.12□□□□□ -0.31
VMA9Q3E7B6 Q0297Q0297 156 nt12.91□□□□□ -0.34
VMA9Q3E7B6 RTC3YHR087W 336 nt12.82□□□□□ -0.36
VMA9Q3E7B6 PUT4YOR348C 1884 nt12.56□□□□□ -0.4
VMA9Q3E7B6 YCR051WYCR051W 669 nt12.39□□□□□ -0.43
VMA9Q3E7B6 TRN1tP(UGG)A 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 SUF9tP(UGG)F 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 SUF8tP(UGG)H 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 tP(UGG)LtP(UGG)L 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 SUF7tP(UGG)M 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 tP(UGG)N1tP(UGG)N1 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 tP(UGG)N2tP(UGG)N2 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 tP(UGG)O1tP(UGG)O1 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 SUF11tP(UGG)O2 72 nt12.35□□□□□ -0.43
VMA9Q3E7B6 RVS167YDR388W 1449 nt12.18□□□□□ -0.46
VMA9Q3E7B6 CCC1YLR220W 969 nt12.17□□□□□ -0.46
VMA9Q3E7B6 ARE1YCR048W 1833 nt12.1□□□□□ -0.47
VMA9Q3E7B6 POA1YBR022W 534 nt12.08□□□□□ -0.48
VMA9Q3E7B6 SCJ1YMR214W 1134 nt12.05□□□□□ -0.48
VMA9Q3E7B6 SPT5YML010W 3192 nt12□□□□□ -0.49
VMA9Q3E7B6 BSC6YOL137W 1494 nt12□□□□□ -0.49
VMA9Q3E7B6 YHR049C-AYHR049C-A 297 nt11.97□□□□□ -0.49
VMA9Q3E7B6 SSA4YER103W 1929 nt11.96□□□□□ -0.49
VMA9Q3E7B6 SAH1YER043C 1350 nt11.85□□□□□ -0.51
VMA9Q3E7B6 URN1YPR152C 1398 nt11.74□□□□□ -0.53
VMA9Q3E7B6 OPI9YLR338W 858 nt11.73□□□□□ -0.53
VMA9Q3E7B6 SCS3YGL126W 1143 nt11.62□□□□□ -0.55
VMA9Q3E7B6 BUD23YCR047C 828 nt11.6□□□□□ -0.55
VMA9Q3E7B6 SHR5YOL110W 714 nt11.6□□□□□ -0.55
VMA9Q3E7B6 RPP1BYDL130W 321 nt11.58□□□□□ -0.56
VMA9Q3E7B6 BDF1YLR399C 2061 nt11.58□□□□□ -0.56
VMA9Q3E7B6 DEP1YAL013W 1218 nt11.53□□□□□ -0.56
VMA9Q3E7B6 YOL085CYOL085C 342 nt11.43□□□□□ -0.58
VMA9Q3E7B6 TAT1YBR069C 1860 nt11.42□□□□□ -0.58
VMA9Q3E7B6 tP(UGG)O3tP(UGG)O3 72 nt11.4□□□□□ -0.58
VMA9Q3E7B6 RPN10YHR200W 807 nt11.38□□□□□ -0.59
VMA9Q3E7B6 PUN1YLR414C 792 nt11.38□□□□□ -0.59
VMA9Q3E7B6 PTC2YER089C 1395 nt11.37□□□□□ -0.59
VMA9Q3E7B6 PKP1YIL042C 1185 nt11.36□□□□□ -0.59
VMA9Q3E7B6 MEP2YNL142W 1500 nt11.33□□□□□ -0.6
VMA9Q3E7B6 PAC11YDR488C 1602 nt11.32□□□□□ -0.6
VMA9Q3E7B6 NAB2YGL122C 1578 nt11.31□□□□□ -0.6
VMA9Q3E7B6 YNL208WYNL208W 600 nt11.24□□□□□ -0.61
VMA9Q3E7B6 PET122YER153C 765 nt11.19□□□□□ -0.62
VMA9Q3E7B6 FIS1YIL065C 468 nt11.16□□□□□ -0.62
VMA9Q3E7B6 DCW1YKL046C 1350 nt11.16□□□□□ -0.62
VMA9Q3E7B6 YJR018WYJR018W 363 nt11.15□□□□□ -0.62
VMA9Q3E7B6 YDJ1YNL064C 1230 nt11.04□□□□□ -0.64
VMA9Q3E7B6 DAL1YIR027C 1383 nt11.03□□□□□ -0.64
VMA9Q3E7B6 YBR220CYBR220C 1683 nt11.02□□□□□ -0.64
VMA9Q3E7B6 YPS1YLR120C 1710 nt11□□□□□ -0.65
VMA9Q3E7B6 NVJ2YPR091C 2313 nt10.98□□□□□ -0.65
VMA9Q3E7B6 FPR4YLR449W 1179 nt10.98□□□□□ -0.65
VMA9Q3E7B6 EMI2YDR516C 1503 nt10.96□□□□□ -0.65
VMA9Q3E7B6 PHO4YFR034C 939 nt10.96□□□□□ -0.65
VMA9Q3E7B6 YHR165W-AYHR165W-A 312 nt10.92□□□□□ -0.66
VMA9Q3E7B6 GAR1YHR089C 618 nt10.91□□□□□ -0.66
VMA9Q3E7B6 YMR090WYMR090W 684 nt10.9□□□□□ -0.66
VMA9Q3E7B6 YJR120WYJR120W 351 nt10.89□□□□□ -0.67
VMA9Q3E7B6 SDH1YKL148C 1923 nt10.84□□□□□ -0.67
VMA9Q3E7B6 YDL221WYDL221W 552 nt10.83□□□□□ -0.68
VMA9Q3E7B6 YDR095CYDR095C 411 nt10.82□□□□□ -0.68
VMA9Q3E7B6 INM2YDR287W 879 nt10.82□□□□□ -0.68
VMA9Q3E7B6 PCH2YBR186W 1695 nt10.8□□□□□ -0.68
VMA9Q3E7B6 SCR1SCR1 522 nt10.8□□□□□ -0.68
VMA9Q3E7B6 GUT2YIL155C 1950 nt10.78□□□□□ -0.68
VMA9Q3E7B6 RRN5YLR141W 1092 nt10.75□□□□□ -0.69
VMA9Q3E7B6 SEC11YIR022W 504 nt10.71□□□□□ -0.69
VMA9Q3E7B6 CAC2YML102W 1407 nt10.71□□□□□ -0.69
VMA9Q3E7B6 RPP2BYDR382W 333 nt10.7□□□□□ -0.7
VMA9Q3E7B6 PTP1YDL230W 1008 nt10.66□□□□□ -0.7
VMA9Q3E7B6 SCC4YER147C 1875 nt10.64□□□□□ -0.71
VMA9Q3E7B6 YBL100CYBL100C 315 nt10.63□□□□□ -0.71
VMA9Q3E7B6 SSA1YAL005C 1929 nt10.62□□□□□ -0.71
VMA9Q3E7B6 PIB2YGL023C 1908 nt10.6□□□□□ -0.71
VMA9Q3E7B6 RPP2AYOL039W 321 nt10.59□□□□□ -0.71
VMA9Q3E7B6 TIR1YER011W 765 nt10.58□□□□□ -0.72
VMA9Q3E7B6 IRC15YPL017C 1500 nt10.56□□□□□ -0.72
VMA9Q3E7B6 YER088W-BYER088W-B 147 nt10.54□□□□□ -0.72
VMA9Q3E7B6 YSC84YHR016C 1407 nt10.51□□□□□ -0.73
VMA9Q3E7B6 GIS3YLR094C 1509 nt10.49□□□□□ -0.73
VMA9Q3E7B6 FUN26YAL022C 1554 nt10.48□□□□□ -0.73
VMA9Q3E7B6 ALF1YNL148C 765 nt10.47□□□□□ -0.73
VMA9Q3E7B6 RTF1YGL244W 1677 nt10.47□□□□□ -0.73
VMA9Q3E7B6 YHL050CYHL050C 2094 nt10.42□□□□□ -0.74
VMA9Q3E7B6 BDH2YAL061W 1254 nt10.38□□□□□ -0.75
VMA9Q3E7B6 FPS1YLL043W 2010 nt10.36□□□□□ -0.75
VMA9Q3E7B6 SRB2YHR041C 633 nt10.35□□□□□ -0.75
VMA9Q3E7B6 SIS1YNL007C 1059 nt10.33□□□□□ -0.76
VMA9Q3E7B6 BOP3YNL042W 1191 nt10.33□□□□□ -0.76
VMA9Q3E7B6 PTK1YKL198C 1989 nt10.32□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms