RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W RPL13BP40212 199 aaKnown RBP3.05□□□□□ -1.92
ROD1YOR018W SWM2P40342 146 aa3.05□□□□□ -1.92
ROD1YOR018W ARR2Q06597 130 aa3.05□□□□□ -1.92
ROD1YOR018W RPL13AQ12690 199 aaPredicted RBP3.05□□□□□ -1.92
ROD1YOR018W YPR145C-AQ2V2P0 78 aa3.05□□□□□ -1.92
ROD1YOR018W CNB1P25296 175 aa3.04□□□□□ -1.92
ROD1YOR018W RIB5P38145 238 aa3.04□□□□□ -1.92
ROD1YOR018W AVT5P38176 459 aa3.04□□□□□ -1.92
ROD1YOR018W HXT14P42833 540 aa3.04□□□□□ -1.92
ROD1YOR018W YGR018CP53211 109 aa3.04□□□□□ -1.92
ROD1YOR018W TMA23Q03525 211 aa3.04□□□□□ -1.92
ROD1YOR018W SHH3Q04487 196 aa3.04□□□□□ -1.92
ROD1YOR018W LDS2Q08218 356 aa3.04□□□□□ -1.92
ROD1YOR018W PIS1P06197 220 aaKnown RBP3.04□□□□□ -1.92
ROD1YOR018W DFR1P07807 211 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
ROD1YOR018W SRB6P32570 121 aa3.04□□□□□ -1.92
ROD1YOR018W PHD1P36093 366 aa3.04□□□□□ -1.92
ROD1YOR018W SDH8P38345 138 aa3.04□□□□□ -1.92
ROD1YOR018W YIL163CP40448 117 aa3.04□□□□□ -1.92
ROD1YOR018W SRB7P47822 140 aa3.04□□□□□ -1.92
ROD1YOR018W BNS1P50084 137 aa3.04□□□□□ -1.92
ROD1YOR018W MRPS17Q03246 237 aaPredicted RBP3.04□□□□□ -1.92
ROD1YOR018W YPS3Q12303 508 aa3.04□□□□□ -1.92
ROD1YOR018W SME1Q12330 94 aaPredicted RBP3.04□□□□□ -1.92
ROD1YOR018W RPB9P27999 122 aa3.03□□□□□ -1.92
ROD1YOR018W NTF2P33331 125 aaKnown RBP3.03□□□□□ -1.92
ROD1YOR018W YIL024CP40543 189 aa3.03□□□□□ -1.92
ROD1YOR018W RTS2P40962 232 aa3.03□□□□□ -1.92
ROD1YOR018W FIP1P45976 327 aa3.03□□□□□ -1.92
ROD1YOR018W HIT1P46973 164 aa3.03□□□□□ -1.92
ROD1YOR018W RPS2P25443 254 aaKnown RBP3.03□□□□□ -1.92
ROD1YOR018W COQ3P27680 312 aa3.03□□□□□ -1.92
ROD1YOR018W RAD23P32628 398 aaKnown RBP3.03□□□□□ -1.92
ROD1YOR018W LOC1P43586 204 aaPredicted RBP3.03□□□□□ -1.92
ROD1YOR018W LST7P53237 242 aa3.03□□□□□ -1.92
ROD1YOR018W RKI1Q12189 258 aa3.03□□□□□ -1.92
ROD1YOR018W CCW14O13547 238 aa3.02□□□□□ -1.93
ROD1YOR018W CDC7P06243 507 aa3.02□□□□□ -1.93
ROD1YOR018W MRPL38P35996 138 aaPredicted RBP3.02□□□□□ -1.93
ROD1YOR018W TAX4P47030 604 aa3.02□□□□□ -1.93
ROD1YOR018W MIC27P50945 234 aa3.02□□□□□ -1.93
ROD1YOR018W YIP1P53039 248 aa3.02□□□□□ -1.93
ROD1YOR018W ERG25P53045 309 aa3.02□□□□□ -1.93
ROD1YOR018W TOM7P53507 60 aa3.02□□□□□ -1.93
ROD1YOR018W CAF40P53829 373 aa3.02□□□□□ -1.93
ROD1YOR018W MSA1Q08471 629 aa3.02□□□□□ -1.93
ROD1YOR018W SRL1Q08673 210 aa3.02□□□□□ -1.93
ROD1YOR018W SPO24Q3E752 67 aa3.02□□□□□ -1.93
ROD1YOR018W BGL2P15703 313 aaKnown RBP3.02□□□□□ -1.93
ROD1YOR018W TOM40P23644 387 aaKnown RBP3.02□□□□□ -1.93
ROD1YOR018W CSH1P38287 376 aa3.02□□□□□ -1.93
ROD1YOR018W DOG2P38773 246 aa3.02□□□□□ -1.93
ROD1YOR018W DOG1P38774 246 aa3.02□□□□□ -1.93
ROD1YOR018W BDH1P39714 382 aa3.02□□□□□ -1.93
ROD1YOR018W SPC25P40014 221 aa3.02□□□□□ -1.93
ROD1YOR018W NSE4P43124 402 aa3.02□□□□□ -1.93
ROD1YOR018W ABM1P47146 123 aa3.02□□□□□ -1.93
ROD1YOR018W PAU4P53427 120 aa3.02□□□□□ -1.93
ROD1YOR018W BOR1P53838 576 aa3.02□□□□□ -1.93
ROD1YOR018W DUG3P53871 357 aa3.02□□□□□ -1.93
ROD1YOR018W YLR302CO13544 120 aa3.01□□□□□ -1.93
ROD1YOR018W YBL071CP38185 102 aa3.01□□□□□ -1.93
ROD1YOR018W YPR013CQ12145 317 aa3.01□□□□□ -1.93
ROD1YOR018W YDR157WA0A023PZE8 133 aa3.01□□□□□ -1.93
ROD1YOR018W PAU1P0CE88 120 aa3.01□□□□□ -1.93
ROD1YOR018W PAU14P0CE89 120 aa3.01□□□□□ -1.93
ROD1YOR018W PAU6P0CE90 120 aa3.01□□□□□ -1.93
ROD1YOR018W PAU18P0CE91 120 aa3.01□□□□□ -1.93
ROD1YOR018W PAU8P0CE92 120 aa3.01□□□□□ -1.93
ROD1YOR018W PAU11P0CE93 120 aa3.01□□□□□ -1.93
ROD1YOR018W YHR213WP0CI67 198 aa3.01□□□□□ -1.93
ROD1YOR018W YBR292CP38357 123 aa3.01□□□□□ -1.93
ROD1YOR018W PAU13P38725 120 aa3.01□□□□□ -1.93
ROD1YOR018W YJL027CP47063 138 aaPredicted RBP3.01□□□□□ -1.93
ROD1YOR018W RIB4P50861 169 aaPredicted RBP3.01□□□□□ -1.93
ROD1YOR018W PAU10Q03050 120 aa3.01□□□□□ -1.93
ROD1YOR018W RAV2Q03956 351 aa3.01□□□□□ -1.93
ROD1YOR018W PAU20Q08322 120 aa3.01□□□□□ -1.93
ROD1YOR018W AYT1Q12226 474 aa3.01□□□□□ -1.93
ROD1YOR018W PAU9Q3E770 120 aa3.01□□□□□ -1.93
ROD1YOR018W YER145C-AA0A023PYF4 145 aa3□□□□□ -1.93
ROD1YOR018W RPB3P16370 318 aaKnown RBP3□□□□□ -1.93
ROD1YOR018W QCR9P22289 66 aa3□□□□□ -1.93
ROD1YOR018W ATG8P38182 117 aaRIP-Chip data3□□□□□ -1.93not detected
ROD1YOR018W MST28P39552 234 aa3□□□□□ -1.93
ROD1YOR018W YMR141CP40211 102 aa3□□□□□ -1.93
ROD1YOR018W VMA21P41806 77 aa3□□□□□ -1.93
ROD1YOR018W LCB3P47013 409 aa3□□□□□ -1.93
ROD1YOR018W MST27P53176 234 aa3□□□□□ -1.93
ROD1YOR018W CAX4P53223 239 aa3□□□□□ -1.93
ROD1YOR018W CPD1P53314 239 aa3□□□□□ -1.93
ROD1YOR018W SSU72P53538 206 aaPredicted RBP3□□□□□ -1.93
ROD1YOR018W SWT21P53873 357 aaPredicted RBP3□□□□□ -1.93
ROD1YOR018W YLR179CQ06252 201 aaKnown RBP3□□□□□ -1.93
ROD1YOR018W PET494P07390 489 aaPredicted RBP3□□□□□ -1.93
ROD1YOR018W LDS1P31379 325 aa3□□□□□ -1.93
ROD1YOR018W ALK2P32789 676 aaPredicted RBP3□□□□□ -1.93
ROD1YOR018W YBR013CP38215 129 aa3□□□□□ -1.93
ROD1YOR018W PET100P38958 111 aa3□□□□□ -1.93
ROD1YOR018W IMP2P46972 177 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms