RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C ARL3Q02804 198 aa1.98□□□□□ -2.09
SUB1YMR039C DIG2Q03373 323 aaKnown RBP1.98□□□□□ -2.09
SUB1YMR039C LDB18Q07887 179 aa1.98□□□□□ -2.09
SUB1YMR039C IRC23Q08416 157 aa1.98□□□□□ -2.09
SUB1YMR039C SLO1Q3E784 85 aa1.98□□□□□ -2.09
SUB1YMR039C NMT1P14743 455 aa1.97□□□□□ -2.09
SUB1YMR039C BUD23P25627 275 aaPredicted RBP1.97□□□□□ -2.09
SUB1YMR039C PAM17P36147 197 aa1.97□□□□□ -2.09
SUB1YMR039C RRT1P38192 103 aa1.97□□□□□ -2.09
SUB1YMR039C YBR220CP38318 560 aa1.97□□□□□ -2.09
SUB1YMR039C DSE2P38844 325 aa1.97□□□□□ -2.09
SUB1YMR039C TVP23P38962 199 aa1.97□□□□□ -2.09
SUB1YMR039C GAA1P39012 614 aa1.97□□□□□ -2.09
SUB1YMR039C YPL073CP40323 161 aa1.97□□□□□ -2.09
SUB1YMR039C YJL027CP47063 138 aaPredicted RBP1.97□□□□□ -2.09
SUB1YMR039C SBH1P52870 82 aa1.97□□□□□ -2.09
SUB1YMR039C YNL033WP53964 284 aa1.97□□□□□ -2.09
SUB1YMR039C CYT2Q00873 224 aa1.97□□□□□ -2.09
SUB1YMR039C SYM1Q06563 197 aa1.97□□□□□ -2.09
SUB1YMR039C HRD1Q08109 551 aa1.97□□□□□ -2.09
SUB1YMR039C TRM3Q07527 1436 aa1.97□□□□□ -2.09
SUB1YMR039C HSL1P34244 1518 aa1.96□□□□□ -2.09
SUB1YMR039C YOR304C-AO14468 76 aa1.96□□□□□ -2.1
SUB1YMR039C SEC11P15367 167 aa1.96□□□□□ -2.1
SUB1YMR039C RPS1BP23248 255 aaKnown RBP1.96□□□□□ -2.1
SUB1YMR039C LHP1P33399 275 aaKnown RBP1.96□□□□□ -2.1
SUB1YMR039C POP3P53833 195 aaPredicted RBP1.96□□□□□ -2.1
SUB1YMR039C YDR391CQ04170 232 aa1.96□□□□□ -2.1
SUB1YMR039C SDH7Q04401 133 aa1.96□□□□□ -2.1
SUB1YMR039C YDR278CQ05612 105 aa1.96□□□□□ -2.1
SUB1YMR039C ANT1Q06497 328 aa1.96□□□□□ -2.1
SUB1YMR039C PRP11Q07350 266 aaPredicted RBP1.96□□□□□ -2.1
SUB1YMR039C YPL225WQ08971 146 aaKnown RBP1.96□□□□□ -2.1
SUB1YMR039C YOR015WQ12169 119 aa1.96□□□□□ -2.1
SUB1YMR039C YIR021W-AQ3E739 70 aa1.96□□□□□ -2.1
SUB1YMR039C MDH2P22133 377 aa1.95□□□□□ -2.1
SUB1YMR039C MRP49P32388 137 aa1.95□□□□□ -2.1
SUB1YMR039C SUI1P32911 108 aaKnown RBP1.95□□□□□ -2.1
SUB1YMR039C PTC1P35182 281 aa1.95□□□□□ -2.1
SUB1YMR039C RPS20P38701 121 aaKnown RBP1.95□□□□□ -2.1
SUB1YMR039C RGI1P40043 161 aaPredicted RBP1.95□□□□□ -2.1
SUB1YMR039C YER181CP40097 107 aa1.95□□□□□ -2.1
SUB1YMR039C FIP1P45976 327 aa1.95□□□□□ -2.1
SUB1YMR039C KNH1P50112 268 aa1.95□□□□□ -2.1
SUB1YMR039C SML1Q04964 104 aa1.95□□□□□ -2.1
SUB1YMR039C YPR174CQ06616 221 aaPredicted RBP1.95□□□□□ -2.1
SUB1YMR039C RAD28Q12021 506 aa1.95□□□□□ -2.1
SUB1YMR039C FYV7Q12247 151 aa1.95□□□□□ -2.1
SUB1YMR039C DUR1,2P32528 1835 aaKnown RBP1.95□□□□□ -2.1
SUB1YMR039C TMA19P35691 167 aaKnown RBP1.94□□□□□ -2.1
SUB1YMR039C YRA2P36036 203 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SUB1YMR039C MRPL24P36525 258 aaPredicted RBP1.94□□□□□ -2.1
SUB1YMR039C HTD2P38790 280 aaKnown RBP1.94□□□□□ -2.1
SUB1YMR039C YEL073CP39974 107 aa1.94□□□□□ -2.1
SUB1YMR039C RIO2P40160 425 aaKnown RBP1.94□□□□□ -2.1
SUB1YMR039C DAD4P69851 72 aa1.94□□□□□ -2.1
SUB1YMR039C BUD25P85052 153 aa1.94□□□□□ -2.1
SUB1YMR039C YDR366CP87287 132 aa1.94□□□□□ -2.1
SUB1YMR039C FYV12Q08559 129 aa1.94□□□□□ -2.1
SUB1YMR039C BOL1Q3E793 110 aa1.94□□□□□ -2.1
SUB1YMR039C ADK1P07170 222 aaKnown RBP1.93□□□□□ -2.1
SUB1YMR039C PHO13P19881 312 aa1.93□□□□□ -2.1
SUB1YMR039C YEL028WP39989 153 aa1.93□□□□□ -2.1
SUB1YMR039C YER135CP40082 130 aa1.93□□□□□ -2.1
SUB1YMR039C DAN1P47178 298 aa1.93□□□□□ -2.1
SUB1YMR039C PAC10P48363 199 aa1.93□□□□□ -2.1
SUB1YMR039C COF1Q03048 143 aaKnown RBP1.93□□□□□ -2.1
SUB1YMR039C LIP1Q03579 150 aa1.93□□□□□ -2.1
SUB1YMR039C DML1Q03652 475 aa1.93□□□□□ -2.1
SUB1YMR039C YPR013CQ12145 317 aa1.93□□□□□ -2.1
SUB1YMR039C ATP14Q12349 124 aa1.93□□□□□ -2.1
SUB1YMR039C YLR099W-AQ3E798 87 aa1.93□□□□□ -2.1
SUB1YMR039C YOR381W-AQ3E804 55 aa1.93□□□□□ -2.1
SUB1YMR039C TRM732Q03496 1420 aa1.92□□□□□ -2.1
SUB1YMR039C SPT14P32363 452 aa1.92□□□□□ -2.1
SUB1YMR039C HYM1P32464 399 aa1.92□□□□□ -2.1
SUB1YMR039C VMA7P39111 118 aa1.92□□□□□ -2.1
SUB1YMR039C PEP8P40335 379 aa1.92□□□□□ -2.1
SUB1YMR039C AYR1P40471 297 aa1.92□□□□□ -2.1
SUB1YMR039C BAT2P47176 376 aaKnown RBP1.92□□□□□ -2.1
SUB1YMR039C YGL193CP53097 103 aa1.92□□□□□ -2.1
SUB1YMR039C YGR039WP53225 103 aa1.92□□□□□ -2.1
SUB1YMR039C HHO1P53551 258 aa1.92□□□□□ -2.1
SUB1YMR039C YNR064CP53750 290 aa1.92□□□□□ -2.1
SUB1YMR039C CWC27Q02770 301 aa1.92□□□□□ -2.1
SUB1YMR039C PIR1Q03178 341 aa1.92□□□□□ -2.1
SUB1YMR039C YDR102CQ03864 110 aa1.92□□□□□ -2.1
SUB1YMR039C RNH202Q05635 350 aa1.92□□□□□ -2.1
SUB1YMR039C CNL1Q06333 122 aa1.92□□□□□ -2.1
SUB1YMR039C REV3P14284 1504 aa1.91□□□□□ -2.1
SUB1YMR039C NRG2P38082 220 aa1.91□□□□□ -2.1
SUB1YMR039C NSE4P43124 402 aa1.91□□□□□ -2.1
SUB1YMR039C THG1P53215 237 aaKnown RBP1.91□□□□□ -2.1
SUB1YMR039C APS2Q00381 147 aa1.91□□□□□ -2.1
SUB1YMR039C AIM36Q03798 255 aa1.91□□□□□ -2.1
SUB1YMR039C ATG10Q07879 167 aa1.91□□□□□ -2.1
SUB1YMR039C SPC3Q12133 184 aa1.91□□□□□ -2.1
SUB1YMR039C YLR118CQ12354 227 aa1.91□□□□□ -2.1
SUB1YMR039C RTR2Q12378 196 aa1.91□□□□□ -2.1
SUB1YMR039C SPP41P38904 1435 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 105.5 ms