Protein–RNA interactions for Protein: P23248

RPS1B, 40S ribosomal protein S1-B, yeastyeast

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS1BP23248 NSR1YGR159C 1245 nt19.09■□□□□ 0.65
RPS1BP23248 YML009W-BYML009W-B 477 nt19.02■□□□□ 0.64
RPS1BP23248 NOP1YDL014W 984 nt18.41■□□□□ 0.54
RPS1BP23248 MDJ1YFL016C 1536 nt17.16■□□□□ 0.34
RPS1BP23248 YKL036CYKL036C 393 nt16.76■□□□□ 0.27
RPS1BP23248 SRX1YKL086W 384 nt16.06■□□□□ 0.16
RPS1BP23248 Q0297Q0297 156 nt16.01■□□□□ 0.15
RPS1BP23248 YJL027CYJL027C 417 nt15.83■□□□□ 0.12
RPS1BP23248 YCR051WYCR051W 669 nt15.25■□□□□ 0.03
RPS1BP23248 SCS3YGL126W 1143 nt15.12■□□□□ 0.01
RPS1BP23248 DBP2YNL112W 1641 nt15.06■□□□□ 0
RPS1BP23248 YBR190WYBR190W 312 nt14.69□□□□□ -0.06
RPS1BP23248 TRN1tP(UGG)A 72 nt14.64□□□□□ -0.07
RPS1BP23248 SUF9tP(UGG)F 72 nt14.64□□□□□ -0.07
RPS1BP23248 SUF8tP(UGG)H 72 nt14.64□□□□□ -0.07
RPS1BP23248 tP(UGG)LtP(UGG)L 72 nt14.64□□□□□ -0.07
RPS1BP23248 SUF7tP(UGG)M 72 nt14.64□□□□□ -0.07
RPS1BP23248 tP(UGG)N1tP(UGG)N1 72 nt14.64□□□□□ -0.07
RPS1BP23248 tP(UGG)N2tP(UGG)N2 72 nt14.64□□□□□ -0.07
RPS1BP23248 tP(UGG)O1tP(UGG)O1 72 nt14.64□□□□□ -0.07
RPS1BP23248 SUF11tP(UGG)O2 72 nt14.64□□□□□ -0.07
RPS1BP23248 CCC1YLR220W 969 nt14.55□□□□□ -0.08
RPS1BP23248 YOL085CYOL085C 342 nt14.52□□□□□ -0.09
RPS1BP23248 RTC3YHR087W 336 nt14.39□□□□□ -0.11
RPS1BP23248 RPP1BYDL130W 321 nt14.38□□□□□ -0.11
RPS1BP23248 PKP1YIL042C 1185 nt14.35□□□□□ -0.11
RPS1BP23248 RVS167YDR388W 1449 nt14.17□□□□□ -0.14
RPS1BP23248 SCJ1YMR214W 1134 nt13.99□□□□□ -0.17
RPS1BP23248 SSA3YBL075C 1950 nt13.8□□□□□ -0.2
RPS1BP23248 tP(UGG)O3tP(UGG)O3 72 nt13.8□□□□□ -0.2
RPS1BP23248 PET122YER153C 765 nt13.76□□□□□ -0.21
RPS1BP23248 SHR5YOL110W 714 nt13.59□□□□□ -0.23
RPS1BP23248 SCR1SCR1 522 nt13.58□□□□□ -0.24
RPS1BP23248 PUT4YOR348C 1884 nt13.5□□□□□ -0.25
RPS1BP23248 ATS1YAL020C 1002 nt13.47□□□□□ -0.25
RPS1BP23248 URN1YPR152C 1398 nt13.37□□□□□ -0.27
RPS1BP23248 RRN5YLR141W 1092 nt13.35□□□□□ -0.27
RPS1BP23248 YDJ1YNL064C 1230 nt13.34□□□□□ -0.27
RPS1BP23248 DEP1YAL013W 1218 nt13.31□□□□□ -0.28
RPS1BP23248 OPI9YLR338W 858 nt13.2□□□□□ -0.3
RPS1BP23248 ARE1YCR048W 1833 nt13.19□□□□□ -0.3
RPS1BP23248 SAH1YER043C 1350 nt13.19□□□□□ -0.3
RPS1BP23248 RPN10YHR200W 807 nt13.12□□□□□ -0.31
RPS1BP23248 GAR1YHR089C 618 nt13.11□□□□□ -0.31
RPS1BP23248 POA1YBR022W 534 nt13.09□□□□□ -0.31
RPS1BP23248 YER088W-BYER088W-B 147 nt13.08□□□□□ -0.32
RPS1BP23248 YNL208WYNL208W 600 nt13.07□□□□□ -0.32
RPS1BP23248 YHR049C-AYHR049C-A 297 nt13.02□□□□□ -0.33
RPS1BP23248 RSB1YOR049C 1065 nt13.02□□□□□ -0.33
RPS1BP23248 BSC6YOL137W 1494 nt12.83□□□□□ -0.36
RPS1BP23248 PUN1YLR414C 792 nt12.82□□□□□ -0.36
RPS1BP23248 BUD23YCR047C 828 nt12.74□□□□□ -0.37
RPS1BP23248 YJR018WYJR018W 363 nt12.74□□□□□ -0.37
RPS1BP23248 PTC2YER089C 1395 nt12.72□□□□□ -0.37
RPS1BP23248 TIR1YER011W 765 nt12.67□□□□□ -0.38
RPS1BP23248 NAB2YGL122C 1578 nt12.58□□□□□ -0.4
RPS1BP23248 SSA1YAL005C 1929 nt12.55□□□□□ -0.4
RPS1BP23248 PST2YDR032C 597 nt12.51□□□□□ -0.41
RPS1BP23248 RPP2BYDR382W 333 nt12.44□□□□□ -0.42
RPS1BP23248 YJR120WYJR120W 351 nt12.44□□□□□ -0.42
RPS1BP23248 FPR4YLR449W 1179 nt12.38□□□□□ -0.43
RPS1BP23248 DAL1YIR027C 1383 nt12.36□□□□□ -0.43
RPS1BP23248 SPT5YML010W 3192 nt12.34□□□□□ -0.43
RPS1BP23248 FIS1YIL065C 468 nt12.34□□□□□ -0.43
RPS1BP23248 INM2YDR287W 879 nt12.32□□□□□ -0.44
RPS1BP23248 SRB2YHR041C 633 nt12.27□□□□□ -0.45
RPS1BP23248 PHO4YFR034C 939 nt12.24□□□□□ -0.45
RPS1BP23248 YBL100CYBL100C 315 nt12.16□□□□□ -0.46
RPS1BP23248 BDH2YAL061W 1254 nt12.13□□□□□ -0.47
RPS1BP23248 SSA4YER103W 1929 nt12.09□□□□□ -0.47
RPS1BP23248 YPS1YLR120C 1710 nt12.08□□□□□ -0.48
RPS1BP23248 WWM1YFL010C 636 nt12.07□□□□□ -0.48
RPS1BP23248 MEP2YNL142W 1500 nt12.06□□□□□ -0.48
RPS1BP23248 SHU1YHL006C 453 nt12.05□□□□□ -0.48
RPS1BP23248 FUN26YAL022C 1554 nt12.01□□□□□ -0.49
RPS1BP23248 YHR165W-AYHR165W-A 312 nt11.99□□□□□ -0.49
RPS1BP23248 TRM9YML014W 840 nt11.97□□□□□ -0.49
RPS1BP23248 YDR095CYDR095C 411 nt11.96□□□□□ -0.49
RPS1BP23248 YAL037C-BYAL037C-B 975 nt11.96□□□□□ -0.49
RPS1BP23248 YGR021WYGR021W 873 nt11.93□□□□□ -0.5
RPS1BP23248 LSM3YLR438C-A 270 nt11.93□□□□□ -0.5
RPS1BP23248 YKL097CYKL097C 411 nt11.91□□□□□ -0.5
RPS1BP23248 ALF1YNL148C 765 nt11.91□□□□□ -0.5
RPS1BP23248 YFL021C-AYFL021C-A 855 nt11.87□□□□□ -0.51
RPS1BP23248 HOM6YJR139C 1080 nt11.86□□□□□ -0.51
RPS1BP23248 DCW1YKL046C 1350 nt11.86□□□□□ -0.51
RPS1BP23248 CCT6YDR188W 1641 nt11.82□□□□□ -0.52
RPS1BP23248 MNP1YGL068W 585 nt11.78□□□□□ -0.52
RPS1BP23248 SUF2tP(AGG)C 72 nt11.76□□□□□ -0.53
RPS1BP23248 SUF10tP(AGG)N 72 nt11.76□□□□□ -0.53
RPS1BP23248 RPP2AYOL039W 321 nt11.75□□□□□ -0.53
RPS1BP23248 BDF1YLR399C 2061 nt11.72□□□□□ -0.53
RPS1BP23248 EMI2YDR516C 1503 nt11.71□□□□□ -0.53
RPS1BP23248 PTP1YDL230W 1008 nt11.7□□□□□ -0.54
RPS1BP23248 RKM5YLR137W 1104 nt11.69□□□□□ -0.54
RPS1BP23248 SIS1YNL007C 1059 nt11.69□□□□□ -0.54
RPS1BP23248 YMR090WYMR090W 684 nt11.68□□□□□ -0.54
RPS1BP23248 CAC2YML102W 1407 nt11.66□□□□□ -0.54
RPS1BP23248 YDL221WYDL221W 552 nt11.61□□□□□ -0.55
RPS1BP23248 TAT1YBR069C 1860 nt11.55□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 376.5 ms