RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W CRZ1P53968 678 aa2.96□□□□□ -1.94
LCB5YLR260W YML018CQ03730 393 aa2.96□□□□□ -1.94
LCB5YLR260W SDH7Q04401 133 aa2.96□□□□□ -1.94
LCB5YLR260W YIR021W-AQ3E739 70 aa2.96□□□□□ -1.94
LCB5YLR260W CYC3P06182 269 aa2.96□□□□□ -1.94
LCB5YLR260W SEC4P07560 215 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W RPL23AP0CX41 137 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W RPL23BP0CX42 137 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W RPL2AP0CX45 254 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W RPL2BP0CX46 254 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W MRPL20P22354 195 aaPredicted RBP2.96□□□□□ -1.94
LCB5YLR260W AHC2P25649 128 aa2.96□□□□□ -1.94
LCB5YLR260W GLC7P32598 312 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W APS1P35181 156 aa2.96□□□□□ -1.94
LCB5YLR260W PMU1P36069 295 aa2.96□□□□□ -1.94
LCB5YLR260W ARN2P38724 620 aa2.96□□□□□ -1.94
LCB5YLR260W PEX17P40155 199 aa2.96□□□□□ -1.94
LCB5YLR260W RFC2P40348 353 aa2.96□□□□□ -1.94
LCB5YLR260W RPA43P46669 326 aa2.96□□□□□ -1.94
LCB5YLR260W YAE1P47118 141 aaPredicted RBP2.96□□□□□ -1.94
LCB5YLR260W SDC1Q03323 175 aa2.96□□□□□ -1.94
LCB5YLR260W LIP2Q06005 328 aa2.96□□□□□ -1.94
LCB5YLR260W SHH4Q06236 168 aa2.96□□□□□ -1.94
LCB5YLR260W PRP11Q07350 266 aaPredicted RBP2.96□□□□□ -1.94
LCB5YLR260W MSA1Q08471 629 aa2.96□□□□□ -1.94
LCB5YLR260W FSF1Q12029 327 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W YDL211CQ12121 372 aa2.96□□□□□ -1.94
LCB5YLR260W RDL1Q12305 139 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W SEC16P48415 2195 aaKnown RBP2.95□□□□□ -1.94
LCB5YLR260W YHR214C-DP0CX93 97 aa2.95□□□□□ -1.94
LCB5YLR260W MRPL39P36533 70 aa2.95□□□□□ -1.94
LCB5YLR260W YGP1P38616 354 aaKnown RBP2.95□□□□□ -1.94
LCB5YLR260W REE1P40893 198 aa2.95□□□□□ -1.94
LCB5YLR260W SER2P42941 309 aa2.95□□□□□ -1.94
LCB5YLR260W ERJ5P43613 295 aaPredicted RBP2.95□□□□□ -1.94
LCB5YLR260W LSM7P53905 115 aaKnown RBP2.95□□□□□ -1.94
LCB5YLR260W YNL046WP53956 172 aa2.95□□□□□ -1.94
LCB5YLR260W YNL033WP53964 284 aa2.95□□□□□ -1.94
LCB5YLR260W YNL019CP53975 284 aa2.95□□□□□ -1.94
LCB5YLR260W API2Q04413 109 aa2.95□□□□□ -1.94
LCB5YLR260W YMR253CQ04835 414 aa2.95□□□□□ -1.94
LCB5YLR260W SNX3Q08826 162 aaKnown RBP2.95□□□□□ -1.94
LCB5YLR260W PBI2P0CT04 75 aaKnown RBP2.94□□□□□ -1.94
LCB5YLR260W SEC59P20048 519 aa2.94□□□□□ -1.94
LCB5YLR260W MDH2P22133 377 aa2.94□□□□□ -1.94
LCB5YLR260W TRS65P32893 560 aa2.94□□□□□ -1.94
LCB5YLR260W GPX1P36014 167 aa2.94□□□□□ -1.94
LCB5YLR260W MRPL24P36525 258 aaPredicted RBP2.94□□□□□ -1.94
LCB5YLR260W MBA1P38300 278 aa2.94□□□□□ -1.94
LCB5YLR260W AVT6P40074 448 aa2.94□□□□□ -1.94
LCB5YLR260W MPM1P40364 252 aa2.94□□□□□ -1.94
LCB5YLR260W YFL051CP43552 160 aa2.94□□□□□ -1.94
LCB5YLR260W YGR018CP53211 109 aa2.94□□□□□ -1.94
LCB5YLR260W ATG39Q06159 398 aa2.94□□□□□ -1.94
LCB5YLR260W YLR179CQ06252 201 aaKnown RBP2.94□□□□□ -1.94
LCB5YLR260W YOR186WQ08560 144 aa2.94□□□□□ -1.94
LCB5YLR260W UIP4Q08926 304 aa2.94□□□□□ -1.94
LCB5YLR260W PCL9Q12477 304 aa2.94□□□□□ -1.94
LCB5YLR260W YHR214C-EQ8TGK0 99 aa2.94□□□□□ -1.94
LCB5YLR260W HEM4P06174 275 aa2.94□□□□□ -1.94
LCB5YLR260W ADK1P07170 222 aaKnown RBP2.94□□□□□ -1.94
LCB5YLR260W YCL042WP25572 119 aa2.94□□□□□ -1.94
LCB5YLR260W NAT2P37293 288 aa2.94□□□□□ -1.94
LCB5YLR260W MNN5P46982 586 aa2.94□□□□□ -1.94
LCB5YLR260W YGL101WP53144 215 aa2.94□□□□□ -1.94
LCB5YLR260W YMR181CQ03231 154 aa2.94□□□□□ -1.94
LCB5YLR260W HRI1Q05905 244 aaKnown RBP2.94□□□□□ -1.94
LCB5YLR260W MIM1Q08176 113 aa2.94□□□□□ -1.94
LCB5YLR260W DGK1Q12382 290 aa2.94□□□□□ -1.94
LCB5YLR260W YHR139C-AO13536 103 aa2.93□□□□□ -1.94
LCB5YLR260W SNF4P12904 322 aa2.93□□□□□ -1.94
LCB5YLR260W PRE1P22141 198 aaKnown RBP2.93□□□□□ -1.94
LCB5YLR260W RCN1P36054 211 aa2.93□□□□□ -1.94
LCB5YLR260W PRY2P36110 329 aa2.93□□□□□ -1.94
LCB5YLR260W TRS20P38334 175 aa2.93□□□□□ -1.94
LCB5YLR260W COS8P38723 381 aa2.93□□□□□ -1.94
LCB5YLR260W RPF1P38805 295 aaKnown RBP2.93□□□□□ -1.94
LCB5YLR260W CHL4P38907 458 aa2.93□□□□□ -1.94
LCB5YLR260W VMA7P39111 118 aa2.93□□□□□ -1.94
LCB5YLR260W YEA4P40004 342 aa2.93□□□□□ -1.94
LCB5YLR260W YNL234WP53857 426 aa2.93□□□□□ -1.94
LCB5YLR260W GPI17Q04080 534 aa2.93□□□□□ -1.94
LCB5YLR260W MCP1Q12106 302 aa2.93□□□□□ -1.94
LCB5YLR260W TIM9O74700 87 aa2.92□□□□□ -1.94
LCB5YLR260W YCR022CP25620 114 aa2.92□□□□□ -1.94
LCB5YLR260W YKL102CP34249 101 aa2.92□□□□□ -1.94
LCB5YLR260W YHL044WP38727 235 aa2.92□□□□□ -1.94
LCB5YLR260W GTT1P40582 234 aa2.92□□□□□ -1.94
LCB5YLR260W SNM1P40993 198 aa2.92□□□□□ -1.94
LCB5YLR260W LCB3P47013 409 aa2.92□□□□□ -1.94
LCB5YLR260W YGL034CP53186 121 aa2.92□□□□□ -1.94
LCB5YLR260W RNH202Q05635 350 aa2.92□□□□□ -1.94
LCB5YLR260W GPI11Q06636 219 aa2.92□□□□□ -1.94
LCB5YLR260W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
LCB5YLR260W YLR112WQ12130 139 aa2.92□□□□□ -1.94
LCB5YLR260W GEP5Q12393 293 aa2.92□□□□□ -1.94
LCB5YLR260W YGL194C-AQ2V2P6 80 aa2.92□□□□□ -1.94
LCB5YLR260W BLM10P43583 2143 aa2.92□□□□□ -1.94
LCB5YLR260W YMR316C-AI2HB70 103 aa2.92□□□□□ -1.94
LCB5YLR260W PIS1P06197 220 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms