Protein–RNA interactions for Protein: P07560

SEC4, Ras-related protein SEC4, yeastyeast

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC4P07560 NSR1YGR159C 1245 nt15.25■□□□□ 0.03
SEC4P07560 YML009W-BYML009W-B 477 nt14.8□□□□□ -0.04
SEC4P07560 NOP1YDL014W 984 nt14.15□□□□□ -0.14
SEC4P07560 MDJ1YFL016C 1536 nt14.1□□□□□ -0.15
SEC4P07560 YJL027CYJL027C 417 nt12.93□□□□□ -0.34
SEC4P07560 YKL036CYKL036C 393 nt12.52□□□□□ -0.41
SEC4P07560 SSA3YBL075C 1950 nt12.46□□□□□ -0.41
SEC4P07560 SRX1YKL086W 384 nt12.38□□□□□ -0.43
SEC4P07560 DBP2YNL112W 1641 nt12.27□□□□□ -0.44
SEC4P07560 Q0297Q0297 156 nt12.23□□□□□ -0.45
SEC4P07560 YBR190WYBR190W 312 nt12.18□□□□□ -0.46
SEC4P07560 RTC3YHR087W 336 nt11.82□□□□□ -0.52
SEC4P07560 YCR051WYCR051W 669 nt11.66□□□□□ -0.54
SEC4P07560 TRN1tP(UGG)A 72 nt11.57□□□□□ -0.56
SEC4P07560 SUF9tP(UGG)F 72 nt11.57□□□□□ -0.56
SEC4P07560 SUF8tP(UGG)H 72 nt11.57□□□□□ -0.56
SEC4P07560 tP(UGG)LtP(UGG)L 72 nt11.57□□□□□ -0.56
SEC4P07560 SUF7tP(UGG)M 72 nt11.57□□□□□ -0.56
SEC4P07560 tP(UGG)N1tP(UGG)N1 72 nt11.57□□□□□ -0.56
SEC4P07560 tP(UGG)N2tP(UGG)N2 72 nt11.57□□□□□ -0.56
SEC4P07560 tP(UGG)O1tP(UGG)O1 72 nt11.57□□□□□ -0.56
SEC4P07560 SUF11tP(UGG)O2 72 nt11.57□□□□□ -0.56
SEC4P07560 PUT4YOR348C 1884 nt11.55□□□□□ -0.56
SEC4P07560 CCC1YLR220W 969 nt11.37□□□□□ -0.59
SEC4P07560 RVS167YDR388W 1449 nt11.35□□□□□ -0.59
SEC4P07560 SCJ1YMR214W 1134 nt11.22□□□□□ -0.61
SEC4P07560 ARE1YCR048W 1833 nt11.14□□□□□ -0.63
SEC4P07560 SCS3YGL126W 1143 nt11.1□□□□□ -0.63
SEC4P07560 POA1YBR022W 534 nt11.08□□□□□ -0.64
SEC4P07560 SPT5YML010W 3192 nt11□□□□□ -0.65
SEC4P07560 BSC6YOL137W 1494 nt10.99□□□□□ -0.65
SEC4P07560 YHR049C-AYHR049C-A 297 nt10.98□□□□□ -0.65
SEC4P07560 RPP1BYDL130W 321 nt10.96□□□□□ -0.65
SEC4P07560 SAH1YER043C 1350 nt10.93□□□□□ -0.66
SEC4P07560 URN1YPR152C 1398 nt10.89□□□□□ -0.67
SEC4P07560 OPI9YLR338W 858 nt10.87□□□□□ -0.67
SEC4P07560 YOL085CYOL085C 342 nt10.87□□□□□ -0.67
SEC4P07560 SSA4YER103W 1929 nt10.85□□□□□ -0.67
SEC4P07560 SHR5YOL110W 714 nt10.84□□□□□ -0.67
SEC4P07560 PKP1YIL042C 1185 nt10.74□□□□□ -0.69
SEC4P07560 tP(UGG)O3tP(UGG)O3 72 nt10.72□□□□□ -0.69
SEC4P07560 DEP1YAL013W 1218 nt10.69□□□□□ -0.7
SEC4P07560 BUD23YCR047C 828 nt10.64□□□□□ -0.71
SEC4P07560 RPN10YHR200W 807 nt10.58□□□□□ -0.72
SEC4P07560 PAC11YDR488C 1602 nt10.57□□□□□ -0.72
SEC4P07560 PET122YER153C 765 nt10.55□□□□□ -0.72
SEC4P07560 PUN1YLR414C 792 nt10.53□□□□□ -0.72
SEC4P07560 BDF1YLR399C 2061 nt10.53□□□□□ -0.72
SEC4P07560 PTC2YER089C 1395 nt10.5□□□□□ -0.73
SEC4P07560 YNL208WYNL208W 600 nt10.48□□□□□ -0.73
SEC4P07560 NAB2YGL122C 1578 nt10.45□□□□□ -0.74
SEC4P07560 YDJ1YNL064C 1230 nt10.39□□□□□ -0.75
SEC4P07560 MEP2YNL142W 1500 nt10.38□□□□□ -0.75
SEC4P07560 TAT1YBR069C 1860 nt10.38□□□□□ -0.75
SEC4P07560 NVJ2YPR091C 2313 nt10.38□□□□□ -0.75
SEC4P07560 YJR018WYJR018W 363 nt10.35□□□□□ -0.75
SEC4P07560 YJL225CYJL225C 5277 nt10.35□□□□□ -0.75
SEC4P07560 FIS1YIL065C 468 nt10.29□□□□□ -0.76
SEC4P07560 SCR1SCR1 522 nt10.23□□□□□ -0.77
SEC4P07560 GAR1YHR089C 618 nt10.22□□□□□ -0.77
SEC4P07560 DAL1YIR027C 1383 nt10.2□□□□□ -0.78
SEC4P07560 DCW1YKL046C 1350 nt10.2□□□□□ -0.78
SEC4P07560 RRN5YLR141W 1092 nt10.15□□□□□ -0.78
SEC4P07560 YPS1YLR120C 1710 nt10.15□□□□□ -0.78
SEC4P07560 PHO4YFR034C 939 nt10.12□□□□□ -0.79
SEC4P07560 YJR120WYJR120W 351 nt10.11□□□□□ -0.79
SEC4P07560 FPR4YLR449W 1179 nt10.11□□□□□ -0.79
SEC4P07560 YBR220CYBR220C 1683 nt10.09□□□□□ -0.79
SEC4P07560 FPS1YLL043W 2010 nt10.07□□□□□ -0.8
SEC4P07560 INM2YDR287W 879 nt10.05□□□□□ -0.8
SEC4P07560 EMI2YDR516C 1503 nt10.04□□□□□ -0.8
SEC4P07560 YHR165W-AYHR165W-A 312 nt10.03□□□□□ -0.8
SEC4P07560 RDN37-1RDN37-1 5354 nt10.02□□□□□ -0.81
SEC4P07560 RDN37-2RDN37-2 5354 nt10.02□□□□□ -0.81
SEC4P07560 YDR095CYDR095C 411 nt9.99□□□□□ -0.81
SEC4P07560 YMR090WYMR090W 684 nt9.99□□□□□ -0.81
SEC4P07560 RPP2BYDR382W 333 nt9.96□□□□□ -0.82
SEC4P07560 YER088W-BYER088W-B 147 nt9.96□□□□□ -0.82
SEC4P07560 SSA1YAL005C 1929 nt9.94□□□□□ -0.82
SEC4P07560 YDL221WYDL221W 552 nt9.93□□□□□ -0.82
SEC4P07560 SDH1YKL148C 1923 nt9.93□□□□□ -0.82
SEC4P07560 TIR1YER011W 765 nt9.92□□□□□ -0.82
SEC4P07560 YBL100CYBL100C 315 nt9.86□□□□□ -0.83
SEC4P07560 CAC2YML102W 1407 nt9.85□□□□□ -0.83
SEC4P07560 PCH2YBR186W 1695 nt9.84□□□□□ -0.83
SEC4P07560 PTP1YDL230W 1008 nt9.84□□□□□ -0.83
SEC4P07560 GUT2YIL155C 1950 nt9.83□□□□□ -0.84
SEC4P07560 SEC11YIR022W 504 nt9.79□□□□□ -0.84
SEC4P07560 RPP2AYOL039W 321 nt9.78□□□□□ -0.84
SEC4P07560 Q0182Q0182 405 nt9.77□□□□□ -0.85
SEC4P07560 SCC4YER147C 1875 nt9.76□□□□□ -0.85
SEC4P07560 RSB1YOR049C 1065 nt9.76□□□□□ -0.85
SEC4P07560 ATS1YAL020C 1002 nt9.75□□□□□ -0.85
SEC4P07560 FUN26YAL022C 1554 nt9.74□□□□□ -0.85
SEC4P07560 IRC15YPL017C 1500 nt9.72□□□□□ -0.85
SEC4P07560 PIB2YGL023C 1908 nt9.69□□□□□ -0.86
SEC4P07560 BDH2YAL061W 1254 nt9.69□□□□□ -0.86
SEC4P07560 SRB2YHR041C 633 nt9.68□□□□□ -0.86
SEC4P07560 ALF1YNL148C 765 nt9.68□□□□□ -0.86
SEC4P07560 GIS3YLR094C 1509 nt9.65□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms