Protein–RNA interactions for Protein: P40074

AVT6, Vacuolar amino acid transporter 6, yeastyeast

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT6P40074 NSR1YGR159C 1245 nt18.58■□□□□ 0.56
AVT6P40074 YML009W-BYML009W-B 477 nt18.14■□□□□ 0.49
AVT6P40074 NOP1YDL014W 984 nt17.33■□□□□ 0.36
AVT6P40074 MDJ1YFL016C 1536 nt17.14■□□□□ 0.33
AVT6P40074 YJL027CYJL027C 417 nt15.7■□□□□ 0.1
AVT6P40074 YKL036CYKL036C 393 nt15.44■□□□□ 0.06
AVT6P40074 SRX1YKL086W 384 nt15.19■□□□□ 0.02
AVT6P40074 Q0297Q0297 156 nt15.02■□□□□ -0
AVT6P40074 DBP2YNL112W 1641 nt14.95□□□□□ -0.02
AVT6P40074 SSA3YBL075C 1950 nt14.86□□□□□ -0.03
AVT6P40074 YBR190WYBR190W 312 nt14.74□□□□□ -0.05
AVT6P40074 RTC3YHR087W 336 nt14.36□□□□□ -0.11
AVT6P40074 YCR051WYCR051W 669 nt14.35□□□□□ -0.11
AVT6P40074 TRN1tP(UGG)A 72 nt14.12□□□□□ -0.15
AVT6P40074 SUF9tP(UGG)F 72 nt14.12□□□□□ -0.15
AVT6P40074 SUF8tP(UGG)H 72 nt14.12□□□□□ -0.15
AVT6P40074 tP(UGG)LtP(UGG)L 72 nt14.12□□□□□ -0.15
AVT6P40074 SUF7tP(UGG)M 72 nt14.12□□□□□ -0.15
AVT6P40074 tP(UGG)N1tP(UGG)N1 72 nt14.12□□□□□ -0.15
AVT6P40074 tP(UGG)N2tP(UGG)N2 72 nt14.12□□□□□ -0.15
AVT6P40074 tP(UGG)O1tP(UGG)O1 72 nt14.12□□□□□ -0.15
AVT6P40074 SUF11tP(UGG)O2 72 nt14.12□□□□□ -0.15
AVT6P40074 CCC1YLR220W 969 nt13.97□□□□□ -0.17
AVT6P40074 PUT4YOR348C 1884 nt13.92□□□□□ -0.18
AVT6P40074 RVS167YDR388W 1449 nt13.76□□□□□ -0.21
AVT6P40074 SCS3YGL126W 1143 nt13.75□□□□□ -0.21
AVT6P40074 SCJ1YMR214W 1134 nt13.69□□□□□ -0.22
AVT6P40074 ARE1YCR048W 1833 nt13.48□□□□□ -0.25
AVT6P40074 RPP1BYDL130W 321 nt13.47□□□□□ -0.25
AVT6P40074 POA1YBR022W 534 nt13.44□□□□□ -0.26
AVT6P40074 YOL085CYOL085C 342 nt13.43□□□□□ -0.26
AVT6P40074 PKP1YIL042C 1185 nt13.32□□□□□ -0.28
AVT6P40074 SAH1YER043C 1350 nt13.28□□□□□ -0.28
AVT6P40074 YHR049C-AYHR049C-A 297 nt13.27□□□□□ -0.29
AVT6P40074 BSC6YOL137W 1494 nt13.25□□□□□ -0.29
AVT6P40074 URN1YPR152C 1398 nt13.23□□□□□ -0.29
AVT6P40074 SHR5YOL110W 714 nt13.2□□□□□ -0.3
AVT6P40074 SPT5YML010W 3192 nt13.18□□□□□ -0.3
AVT6P40074 OPI9YLR338W 858 nt13.18□□□□□ -0.3
AVT6P40074 tP(UGG)O3tP(UGG)O3 72 nt13.16□□□□□ -0.3
AVT6P40074 DEP1YAL013W 1218 nt13.07□□□□□ -0.32
AVT6P40074 SSA4YER103W 1929 nt12.98□□□□□ -0.33
AVT6P40074 PET122YER153C 765 nt12.97□□□□□ -0.33
AVT6P40074 BUD23YCR047C 828 nt12.9□□□□□ -0.34
AVT6P40074 RPN10YHR200W 807 nt12.82□□□□□ -0.36
AVT6P40074 PUN1YLR414C 792 nt12.75□□□□□ -0.37
AVT6P40074 YNL208WYNL208W 600 nt12.75□□□□□ -0.37
AVT6P40074 PTC2YER089C 1395 nt12.74□□□□□ -0.37
AVT6P40074 YDJ1YNL064C 1230 nt12.71□□□□□ -0.37
AVT6P40074 NAB2YGL122C 1578 nt12.64□□□□□ -0.39
AVT6P40074 BDF1YLR399C 2061 nt12.62□□□□□ -0.39
AVT6P40074 YJR018WYJR018W 363 nt12.59□□□□□ -0.39
AVT6P40074 SCR1SCR1 522 nt12.58□□□□□ -0.4
AVT6P40074 GAR1YHR089C 618 nt12.55□□□□□ -0.4
AVT6P40074 RRN5YLR141W 1092 nt12.54□□□□□ -0.4
AVT6P40074 MEP2YNL142W 1500 nt12.51□□□□□ -0.41
AVT6P40074 FIS1YIL065C 468 nt12.44□□□□□ -0.42
AVT6P40074 TAT1YBR069C 1860 nt12.4□□□□□ -0.42
AVT6P40074 PAC11YDR488C 1602 nt12.37□□□□□ -0.43
AVT6P40074 DAL1YIR027C 1383 nt12.35□□□□□ -0.43
AVT6P40074 YJR120WYJR120W 351 nt12.35□□□□□ -0.43
AVT6P40074 DCW1YKL046C 1350 nt12.33□□□□□ -0.44
AVT6P40074 FPR4YLR449W 1179 nt12.3□□□□□ -0.44
AVT6P40074 YER088W-BYER088W-B 147 nt12.29□□□□□ -0.44
AVT6P40074 PHO4YFR034C 939 nt12.26□□□□□ -0.45
AVT6P40074 YPS1YLR120C 1710 nt12.25□□□□□ -0.45
AVT6P40074 INM2YDR287W 879 nt12.2□□□□□ -0.46
AVT6P40074 SSA1YAL005C 1929 nt12.17□□□□□ -0.46
AVT6P40074 TIR1YER011W 765 nt12.15□□□□□ -0.46
AVT6P40074 NVJ2YPR091C 2313 nt12.14□□□□□ -0.47
AVT6P40074 YBR220CYBR220C 1683 nt12.13□□□□□ -0.47
AVT6P40074 YHR165W-AYHR165W-A 312 nt12.13□□□□□ -0.47
AVT6P40074 EMI2YDR516C 1503 nt12.12□□□□□ -0.47
AVT6P40074 ATS1YAL020C 1002 nt12.12□□□□□ -0.47
AVT6P40074 RPP2BYDR382W 333 nt12.1□□□□□ -0.47
AVT6P40074 YDR095CYDR095C 411 nt12.08□□□□□ -0.48
AVT6P40074 RSB1YOR049C 1065 nt12.05□□□□□ -0.48
AVT6P40074 YMR090WYMR090W 684 nt12.01□□□□□ -0.49
AVT6P40074 YBL100CYBL100C 315 nt11.99□□□□□ -0.49
AVT6P40074 CAC2YML102W 1407 nt11.96□□□□□ -0.49
AVT6P40074 YDL221WYDL221W 552 nt11.96□□□□□ -0.49
AVT6P40074 SDH1YKL148C 1923 nt11.95□□□□□ -0.5
AVT6P40074 PTP1YDL230W 1008 nt11.93□□□□□ -0.5
AVT6P40074 SRB2YHR041C 633 nt11.92□□□□□ -0.5
AVT6P40074 RPP2AYOL039W 321 nt11.85□□□□□ -0.51
AVT6P40074 FUN26YAL022C 1554 nt11.84□□□□□ -0.51
AVT6P40074 PCH2YBR186W 1695 nt11.81□□□□□ -0.52
AVT6P40074 BDH2YAL061W 1254 nt11.8□□□□□ -0.52
AVT6P40074 GUT2YIL155C 1950 nt11.78□□□□□ -0.52
AVT6P40074 IRC15YPL017C 1500 nt11.77□□□□□ -0.52
AVT6P40074 SCC4YER147C 1875 nt11.77□□□□□ -0.53
AVT6P40074 ALF1YNL148C 765 nt11.75□□□□□ -0.53
AVT6P40074 SEC11YIR022W 504 nt11.72□□□□□ -0.53
AVT6P40074 GIS3YLR094C 1509 nt11.69□□□□□ -0.54
AVT6P40074 TRM9YML014W 840 nt11.67□□□□□ -0.54
AVT6P40074 SIS1YNL007C 1059 nt11.66□□□□□ -0.54
AVT6P40074 PIB2YGL023C 1908 nt11.64□□□□□ -0.55
AVT6P40074 CCT6YDR188W 1641 nt11.6□□□□□ -0.55
AVT6P40074 YSC84YHR016C 1407 nt11.59□□□□□ -0.55
AVT6P40074 GFD2YCL036W 1701 nt11.56□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms