RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W ALK2P32789 676 aaPredicted RBP10.23□□□□□ -0.77
PTP1YDL230W PSD1P39006 500 aa10.23□□□□□ -0.77
PTP1YDL230W NSA2P40078 261 aaKnown RBP10.23□□□□□ -0.77
PTP1YDL230W RPL9BP51401 191 aaKnown RBP10.23□□□□□ -0.77
PTP1YDL230W YPS3Q12303 508 aa10.23□□□□□ -0.77
PTP1YDL230W RAX2Q12465 1220 aa10.23□□□□□ -0.77
PTP1YDL230W ATP10P18496 279 aa10.22□□□□□ -0.77
PTP1YDL230W RPS0AP32905 252 aaKnown RBP10.22□□□□□ -0.77
PTP1YDL230W ATP3P38077 311 aaKnown RBP10.22□□□□□ -0.77
PTP1YDL230W ECM14P38836 430 aa10.22□□□□□ -0.77
PTP1YDL230W YGL114WP53134 725 aa10.22□□□□□ -0.77
PTP1YDL230W DMA2P53924 522 aa10.22□□□□□ -0.77
PTP1YDL230W DER1P38307 211 aa10.21□□□□□ -0.77
PTP1YDL230W HIT1P46973 164 aa10.21□□□□□ -0.77
PTP1YDL230W YHP1Q04116 353 aa10.21□□□□□ -0.77
PTP1YDL230W PET494P07390 489 aaPredicted RBP10.2□□□□□ -0.78
PTP1YDL230W NOP1P15646 327 aaKnown RBP10.2□□□□□ -0.78
PTP1YDL230W YBR184WP38299 523 aa10.2□□□□□ -0.78
PTP1YDL230W YPT31P38555 223 aaKnown RBP10.2□□□□□ -0.78
PTP1YDL230W BOR1P53838 576 aa10.2□□□□□ -0.78
PTP1YDL230W SHH3Q04487 196 aa10.2□□□□□ -0.78
PTP1YDL230W YMR316C-AI2HB70 103 aa10.19□□□□□ -0.78
PTP1YDL230W CDC7P06243 507 aa10.19□□□□□ -0.78
PTP1YDL230W SPS18P32572 300 aa10.19□□□□□ -0.78
PTP1YDL230W YER121WP40076 114 aa10.19□□□□□ -0.78
PTP1YDL230W SPC29P33419 253 aa10.18□□□□□ -0.78
PTP1YDL230W PTC7P38797 343 aa10.18□□□□□ -0.78
PTP1YDL230W YJL118WP47022 219 aa10.18□□□□□ -0.78
PTP1YDL230W LST7P53237 242 aa10.18□□□□□ -0.78
PTP1YDL230W DAD3P69850 94 aa10.18□□□□□ -0.78
PTP1YDL230W ARL3Q02804 198 aa10.18□□□□□ -0.78
PTP1YDL230W FRS1P15624 595 aaKnown RBP10.17□□□□□ -0.78
PTP1YDL230W BGL2P15703 313 aaKnown RBP10.17□□□□□ -0.78
PTP1YDL230W ALG14P38242 237 aa10.17□□□□□ -0.78
PTP1YDL230W YGP1P38616 354 aaKnown RBP10.17□□□□□ -0.78
PTP1YDL230W IMD2P38697 523 aaKnown RBP10.17□□□□□ -0.78
PTP1YDL230W POS5Q06892 414 aa10.17□□□□□ -0.78
PTP1YDL230W ATG27P46989 271 aa10.16□□□□□ -0.78
PTP1YDL230W DSK2P48510 373 aa10.16□□□□□ -0.78
PTP1YDL230W MIC27P50945 234 aa10.16□□□□□ -0.78
PTP1YDL230W YNL046WP53956 172 aa10.16□□□□□ -0.78
PTP1YDL230W LOA1Q06508 300 aa10.16□□□□□ -0.78
PTP1YDL230W STP4Q07351 490 aa10.16□□□□□ -0.78
PTP1YDL230W LDS2Q08218 356 aa10.16□□□□□ -0.78
PTP1YDL230W NHP6AP11632 93 aaKnown RBP10.15□□□□□ -0.78
PTP1YDL230W SPS100P13130 326 aa10.15□□□□□ -0.78
PTP1YDL230W AFR1P33304 620 aa10.15□□□□□ -0.78
PTP1YDL230W SOR1P35497 357 aaKnown RBP10.15□□□□□ -0.78
PTP1YDL230W ATC1Q04005 294 aa10.15□□□□□ -0.78
PTP1YDL230W SOR2Q07786 357 aa10.15□□□□□ -0.78
PTP1YDL230W LAS17Q12446 633 aa10.15□□□□□ -0.78
PTP1YDL230W HTB1P02293 131 aaKnown RBP10.14□□□□□ -0.79
PTP1YDL230W NAT3Q06504 195 aa10.14□□□□□ -0.79
PTP1YDL230W SNA4Q07549 140 aa10.14□□□□□ -0.79
PTP1YDL230W YDL009CQ12210 107 aa10.14□□□□□ -0.79
PTP1YDL230W YCL048W-AQ2V2Q2 79 aa10.14□□□□□ -0.79
PTP1YDL230W TRP4P07285 380 aaPredicted RBP10.13□□□□□ -0.79
PTP1YDL230W RPS2P25443 254 aaKnown RBP10.13□□□□□ -0.79
PTP1YDL230W SSS1P35179 80 aa10.13□□□□□ -0.79
PTP1YDL230W ADH5P38113 351 aaKnown RBP10.13□□□□□ -0.79
PTP1YDL230W HSP10P38910 106 aa10.13□□□□□ -0.79
PTP1YDL230W YIL163CP40448 117 aa10.13□□□□□ -0.79
PTP1YDL230W SGN1P40561 250 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
PTP1YDL230W PAU5P43575 122 aa10.13□□□□□ -0.79
PTP1YDL230W YGL185CP53100 379 aa10.13□□□□□ -0.79
PTP1YDL230W YOP1Q12402 180 aa10.13□□□□□ -0.79
PTP1YDL230W RPS22AP0C0W1 130 aaKnown RBP10.12□□□□□ -0.79
PTP1YDL230W TOM40P23644 387 aaKnown RBP10.12□□□□□ -0.79
PTP1YDL230W HMX1P32339 317 aa10.12□□□□□ -0.79
PTP1YDL230W MRPL28P36527 147 aa10.12□□□□□ -0.79
PTP1YDL230W FMP49A0A023PZB3 126 aa10.11□□□□□ -0.79
PTP1YDL230W PAU19P0CE85 124 aa10.11□□□□□ -0.79
PTP1YDL230W PAU21P0CE86 164 aa10.11□□□□□ -0.79
PTP1YDL230W PAU22P0CE87 164 aa10.11□□□□□ -0.79
PTP1YDL230W PAU3P25610 124 aa10.11□□□□□ -0.79
PTP1YDL230W YKL187CP34231 750 aa10.11□□□□□ -0.79
PTP1YDL230W PHD1P36093 366 aa10.11□□□□□ -0.79
PTP1YDL230W SSU72P53538 206 aaPredicted RBP10.11□□□□□ -0.79
PTP1YDL230W PIS1P06197 220 aaKnown RBP10.1□□□□□ -0.79
PTP1YDL230W TY1A-HP0C2I4 478 aaKnown RBP10.1□□□□□ -0.79
PTP1YDL230W RNA15P25299 296 aaPredicted RBP10.1□□□□□ -0.79
PTP1YDL230W PMU1P36069 295 aa10.1□□□□□ -0.79
PTP1YDL230W GPI2P46961 280 aa10.1□□□□□ -0.79
PTP1YDL230W PUS4P48567 403 aaKnown RBP10.1□□□□□ -0.79
PTP1YDL230W YNR064CP53750 290 aa10.1□□□□□ -0.79
PTP1YDL230W NDE2Q07500 545 aa10.1□□□□□ -0.79
PTP1YDL230W PAA1Q12447 191 aaKnown RBP10.1□□□□□ -0.79
PTP1YDL230W CMC2Q3E7A4 109 aa10.1□□□□□ -0.79
PTP1YDL230W SOD1P00445 154 aaKnown RBP10.09□□□□□ -0.79
PTP1YDL230W DFR1P07807 211 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
PTP1YDL230W YGL010WP25338 174 aa10.09□□□□□ -0.79
PTP1YDL230W ACP1P32463 125 aa10.09□□□□□ -0.79
PTP1YDL230W MTR2P34232 184 aaKnown RBP10.09□□□□□ -0.79
PTP1YDL230W CDS1P38221 457 aa10.09□□□□□ -0.79
PTP1YDL230W CGR1P53188 120 aa10.09□□□□□ -0.79
PTP1YDL230W SEN15Q04675 128 aa10.09□□□□□ -0.79
PTP1YDL230W GEP5Q12393 293 aa10.09□□□□□ -0.79
PTP1YDL230W GCN1P33892 2672 aaKnown RBP10.08□□□□□ -0.8
PTP1YDL230W RAD23P32628 398 aaKnown RBP10.08□□□□□ -0.8
PTP1YDL230W YKR045CP36138 183 aa10.08□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms