RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W YML108WQ03759 105 aa1.49□□□□□ -2.17
PDP3YLR455W SPG3Q04398 127 aaPredicted RBP1.49□□□□□ -2.17
PDP3YLR455W YMR226CQ05016 267 aaKnown RBP1.49□□□□□ -2.17
PDP3YLR455W SSQ1Q05931 657 aaPredicted RBP1.49□□□□□ -2.17
PDP3YLR455W YRA1Q12159 226 aaKnown RBP1.49□□□□□ -2.17
PDP3YLR455W YLR126CQ12288 251 aa1.49□□□□□ -2.17
PDP3YLR455W DCN1Q12395 269 aa1.49□□□□□ -2.17
PDP3YLR455W YHR139C-AO13536 103 aa1.48□□□□□ -2.17
PDP3YLR455W RPL28P02406 149 aaKnown RBP1.48□□□□□ -2.17
PDP3YLR455W CDC10P25342 322 aaKnown RBP1.48□□□□□ -2.17
PDP3YLR455W MEI4P29467 408 aa1.48□□□□□ -2.17
PDP3YLR455W YBR063CP38083 404 aa1.48□□□□□ -2.17
PDP3YLR455W MAK5P38112 773 aaPredicted RBP1.48□□□□□ -2.17
PDP3YLR455W YAR068WP39564 161 aa1.48□□□□□ -2.17
PDP3YLR455W EDC3P39998 551 aaKnown RBP1.48□□□□□ -2.17
PDP3YLR455W RFC4P40339 323 aaKnown RBP1.48□□□□□ -2.17
PDP3YLR455W PRM10P42946 383 aa1.48□□□□□ -2.17
PDP3YLR455W TOS8P53147 276 aa1.48□□□□□ -2.17
PDP3YLR455W ATG38Q05789 226 aaKnown RBP1.48□□□□□ -2.17
PDP3YLR455W YPR114WQ06107 315 aa1.48□□□□□ -2.17
PDP3YLR455W DDP1Q99321 188 aaKnown RBP1.48□□□□□ -2.17
PDP3YLR455W IRA2P19158 3079 aa1.47□□□□□ -2.17
PDP3YLR455W BCY1P07278 416 aaKnown RBP1.47□□□□□ -2.17
PDP3YLR455W FCY2P17064 533 aa1.47□□□□□ -2.17
PDP3YLR455W IDH1P28834 360 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
PDP3YLR455W ERG28P40030 148 aa1.47□□□□□ -2.17
PDP3YLR455W PEX17P40155 199 aa1.47□□□□□ -2.17
PDP3YLR455W YNL194CP40169 301 aa1.47□□□□□ -2.17
PDP3YLR455W NSA1P53136 463 aaPredicted RBP1.47□□□□□ -2.17
PDP3YLR455W BUD25P85052 153 aa1.47□□□□□ -2.17
PDP3YLR455W MRPS17Q03246 237 aaPredicted RBP1.47□□□□□ -2.17
PDP3YLR455W YML096WQ04489 525 aa1.47□□□□□ -2.17
PDP3YLR455W CDC123Q05791 360 aa1.47□□□□□ -2.17
PDP3YLR455W LDB18Q07887 179 aa1.47□□□□□ -2.17
PDP3YLR455W GET4Q12125 312 aa1.47□□□□□ -2.17
PDP3YLR455W YLR046CQ12253 270 aa1.47□□□□□ -2.17
PDP3YLR455W GTT2Q12390 233 aa1.47□□□□□ -2.17
PDP3YLR455W PEX11Q12462 236 aa1.47□□□□□ -2.17
PDP3YLR455W PSF1Q12488 208 aa1.47□□□□□ -2.17
PDP3YLR455W YIL046W-AQ3E7Z4 54 aa1.47□□□□□ -2.17
PDP3YLR455W CDC8P00572 216 aa1.46□□□□□ -2.18
PDP3YLR455W CPA1P07258 411 aaKnown RBP1.46□□□□□ -2.18
PDP3YLR455W MER1P16523 270 aa1.46□□□□□ -2.18
PDP3YLR455W CBF1P17106 351 aa1.46□□□□□ -2.18
PDP3YLR455W PET9P18239 318 aaKnown RBP1.46□□□□□ -2.18
PDP3YLR455W MGM101P32787 269 aaKnown RBP1.46□□□□□ -2.18
PDP3YLR455W NTF2P33331 125 aaKnown RBP1.46□□□□□ -2.18
PDP3YLR455W MRPL15P36523 253 aa1.46□□□□□ -2.18
PDP3YLR455W URA8P38627 578 aaPredicted RBP1.46□□□□□ -2.18
PDP3YLR455W RTC3P38804 111 aaPredicted RBP1.46□□□□□ -2.18
PDP3YLR455W AIM18P38884 321 aa1.46□□□□□ -2.18
PDP3YLR455W ICE2P40499 491 aa1.46□□□□□ -2.18
PDP3YLR455W YIL001WP40560 513 aa1.46□□□□□ -2.18
PDP3YLR455W TRM9P49957 279 aa1.46□□□□□ -2.18
PDP3YLR455W MIC26P50087 233 aa1.46□□□□□ -2.18
PDP3YLR455W CUS2P53830 285 aaPredicted RBP1.46□□□□□ -2.18
PDP3YLR455W FYV6P53913 173 aa1.46□□□□□ -2.18
PDP3YLR455W PIR1Q03178 341 aa1.46□□□□□ -2.18
PDP3YLR455W JLP1Q12358 412 aa1.46□□□□□ -2.18
PDP3YLR455W YKL183C-AQ3E765 70 aa1.46□□□□□ -2.18
PDP3YLR455W LSO2Q3E772 92 aaKnown RBP1.46□□□□□ -2.18
PDP3YLR455W IRA1P18963 3092 aa1.45□□□□□ -2.18
PDP3YLR455W HTB1P02293 131 aaKnown RBP1.45□□□□□ -2.18
PDP3YLR455W HTB2P02294 131 aa1.45□□□□□ -2.18
PDP3YLR455W RPL27AP0C2H6 136 aaKnown RBP1.45□□□□□ -2.18
PDP3YLR455W RPL27BP0C2H7 136 aaKnown RBP1.45□□□□□ -2.18
PDP3YLR455W VTC1P40046 129 aaRIP-Chip data1.45□□□□□ -2.18not detected
PDP3YLR455W ADO1P47143 340 aaKnown RBP1.45□□□□□ -2.18
PDP3YLR455W CWC23P52868 283 aaPredicted RBP1.45□□□□□ -2.18
PDP3YLR455W ERV29P53337 310 aa1.45□□□□□ -2.18
PDP3YLR455W GCN1P33892 2672 aaKnown RBP1.44□□□□□ -2.18
PDP3YLR455W ACC1Q00955 2233 aaKnown RBP1.44□□□□□ -2.18
PDP3YLR455W PRP8P33334 2413 aaKnown RBP1.44□□□□□ -2.18
PDP3YLR455W YDR157WA0A023PZE8 133 aa1.44□□□□□ -2.18
PDP3YLR455W QCR6P00127 147 aa1.44□□□□□ -2.18
PDP3YLR455W REP2P03872 296 aa1.44□□□□□ -2.18
PDP3YLR455W RPL43AP0CX25 92 aaKnown RBP1.44□□□□□ -2.18
PDP3YLR455W RPL43BP0CX26 92 aa1.44□□□□□ -2.18
PDP3YLR455W URA6P15700 204 aa1.44□□□□□ -2.18
PDP3YLR455W YPK2P18961 677 aa1.44□□□□□ -2.18
PDP3YLR455W YGL010WP25338 174 aa1.44□□□□□ -2.18
PDP3YLR455W YEL028WP39989 153 aa1.44□□□□□ -2.18
PDP3YLR455W GIM4P40005 111 aaKnown RBP1.44□□□□□ -2.18
PDP3YLR455W IRC22P40006 225 aa1.44□□□□□ -2.18
PDP3YLR455W YRB2P40517 327 aa1.44□□□□□ -2.18
PDP3YLR455W NUP57P48837 541 aa1.44□□□□□ -2.18
PDP3YLR455W ALG13P53178 202 aa1.44□□□□□ -2.18
PDP3YLR455W GET1P53192 235 aa1.44□□□□□ -2.18
PDP3YLR455W ATG10Q07879 167 aa1.44□□□□□ -2.18
PDP3YLR455W YOL162WP0CF19 215 aa1.43□□□□□ -2.18
PDP3YLR455W YBR220CP38318 560 aa1.43□□□□□ -2.18
PDP3YLR455W TRM5P38793 499 aa1.43□□□□□ -2.18
PDP3YLR455W IKI1P38874 309 aa1.43□□□□□ -2.18
PDP3YLR455W CYC2P38909 366 aa1.43□□□□□ -2.18
PDP3YLR455W AGE2P40529 298 aa1.43□□□□□ -2.18
PDP3YLR455W TIR3P40552 269 aa1.43□□□□□ -2.18
PDP3YLR455W MGA1P53050 456 aa1.43□□□□□ -2.18
PDP3YLR455W BRR6P53062 197 aa1.43□□□□□ -2.18
PDP3YLR455W EMC4P53073 190 aa1.43□□□□□ -2.18
PDP3YLR455W TRM12Q04235 462 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 116.8 ms