RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W YPR098CQ06089 161 aa6.36□□□□□ -1.39
SNF7YLR025W DXO1Q06349 442 aa6.36□□□□□ -1.39
SNF7YLR025W PIN3Q06449 215 aa6.36□□□□□ -1.39
SNF7YLR025W YOR015WQ12169 119 aa6.36□□□□□ -1.39
SNF7YLR025W RPL7BQ12213 244 aaKnown RBP6.36□□□□□ -1.39
SNF7YLR025W Q0142Q9ZZW4 58 aa6.36□□□□□ -1.39
SNF7YLR025W FMP27Q06179 2628 aa6.36□□□□□ -1.39
SNF7YLR025W ADH3P07246 375 aaKnown RBP6.35□□□□□ -1.39
SNF7YLR025W MSI1P13712 422 aa6.35□□□□□ -1.39
SNF7YLR025W AGA2P32781 87 aa6.35□□□□□ -1.39
SNF7YLR025W RPB7P34087 171 aa6.35□□□□□ -1.39
SNF7YLR025W SLM6P38343 150 aa6.35□□□□□ -1.39
SNF7YLR025W UME6P39001 836 aa6.35□□□□□ -1.39
SNF7YLR025W CCS1P40202 249 aaKnown RBP6.35□□□□□ -1.39
SNF7YLR025W RFC2P40348 353 aa6.35□□□□□ -1.39
SNF7YLR025W YIL169CP40442 995 aa6.35□□□□□ -1.39
SNF7YLR025W YDR209CQ03480 137 aa6.35□□□□□ -1.39
SNF7YLR025W SME1Q12330 94 aaPredicted RBP6.35□□□□□ -1.39
SNF7YLR025W SEC16P48415 2195 aaKnown RBP6.35□□□□□ -1.39
SNF7YLR025W CDC7P06243 507 aa6.34□□□□□ -1.39
SNF7YLR025W SAG1P20840 650 aa6.34□□□□□ -1.39
SNF7YLR025W ERG2P32352 222 aa6.34□□□□□ -1.39
SNF7YLR025W ATG8P38182 117 aaRIP-Chip data6.34□□□□□ -1.39not detected
SNF7YLR025W UBS1P38290 277 aa6.34□□□□□ -1.39
SNF7YLR025W NTC20P38302 140 aaPredicted RBP6.34□□□□□ -1.39
SNF7YLR025W FLX1P40464 311 aa6.34□□□□□ -1.39
SNF7YLR025W RTS2P40962 232 aa6.34□□□□□ -1.39
SNF7YLR025W NSE4P43124 402 aa6.34□□□□□ -1.39
SNF7YLR025W BNA2P47125 453 aa6.34□□□□□ -1.39
SNF7YLR025W RCE1Q03530 315 aa6.34□□□□□ -1.39
SNF7YLR025W HOF1Q05080 669 aa6.34□□□□□ -1.39
SNF7YLR025W FRE8Q12209 686 aa6.34□□□□□ -1.39
SNF7YLR025W COX19Q3E731 98 aa6.34□□□□□ -1.39
SNF7YLR025W YPR108W-AQ3E7B3 70 aa6.34□□□□□ -1.39
SNF7YLR025W HUG1Q6Q5K6 68 aa6.34□□□□□ -1.39
SNF7YLR025W HFA1P32874 2273 aa6.34□□□□□ -1.39
SNF7YLR025W ACC1Q00955 2233 aaKnown RBP6.34□□□□□ -1.39
SNF7YLR025W FLO9P39712 1322 aa6.33□□□□□ -1.4
SNF7YLR025W STE4P18851 423 aa6.33□□□□□ -1.4
SNF7YLR025W ERV1P27882 189 aa6.33□□□□□ -1.4
SNF7YLR025W SIP1P32578 815 aa6.33□□□□□ -1.4
SNF7YLR025W UPS2P35200 230 aa6.33□□□□□ -1.4
SNF7YLR025W SHM2P37291 469 aaKnown RBP6.33□□□□□ -1.4
SNF7YLR025W SWD3P38123 315 aa6.33□□□□□ -1.4
SNF7YLR025W PCL7P40186 285 aa6.33□□□□□ -1.4
SNF7YLR025W VMA21P41806 77 aa6.33□□□□□ -1.4
SNF7YLR025W YPL067CQ02754 198 aa6.33□□□□□ -1.4
SNF7YLR025W YPL077CQ02831 240 aa6.33□□□□□ -1.4
SNF7YLR025W UPS1Q05776 175 aa6.33□□□□□ -1.4
SNF7YLR025W ATG33Q06485 197 aa6.33□□□□□ -1.4
SNF7YLR025W YDL086WQ07505 273 aa6.33□□□□□ -1.4
SNF7YLR025W SWT1Q12104 458 aa6.33□□□□□ -1.4
SNF7YLR025W MAK32P23060 363 aa6.32□□□□□ -1.4
SNF7YLR025W IMP1P28627 190 aa6.32□□□□□ -1.4
SNF7YLR025W RTC3P38804 111 aaPredicted RBP6.32□□□□□ -1.4
SNF7YLR025W PUS4P48567 403 aaKnown RBP6.32□□□□□ -1.4
SNF7YLR025W YGL262WP53054 175 aa6.32□□□□□ -1.4
SNF7YLR025W TIM21P53220 239 aa6.32□□□□□ -1.4
SNF7YLR025W PDR17P53844 350 aa6.32□□□□□ -1.4
SNF7YLR025W YMR082CQ04276 118 aa6.32□□□□□ -1.4
SNF7YLR025W RIM9Q04734 239 aa6.32□□□□□ -1.4
SNF7YLR025W YLR179CQ06252 201 aaKnown RBP6.32□□□□□ -1.4
SNF7YLR025W RAF1Q06891 181 aa6.32□□□□□ -1.4
SNF7YLR025W YDL242WQ07746 117 aa6.32□□□□□ -1.4
SNF7YLR025W MET3P08536 511 aa6.31□□□□□ -1.4
SNF7YLR025W RPB3P16370 318 aaKnown RBP6.31□□□□□ -1.4
SNF7YLR025W SEC59P20048 519 aa6.31□□□□□ -1.4
SNF7YLR025W LAC1P28496 418 aa6.31□□□□□ -1.4
SNF7YLR025W RMD6P39975 231 aa6.31□□□□□ -1.4
SNF7YLR025W NOP16P40007 231 aaKnown RBP6.31□□□□□ -1.4
SNF7YLR025W PIG2P40187 538 aa6.31□□□□□ -1.4
SNF7YLR025W SMD3P43321 101 aaKnown RBP6.31□□□□□ -1.4
SNF7YLR025W ATG4P53867 494 aa6.31□□□□□ -1.4
SNF7YLR025W YMR279CQ03263 540 aa6.31□□□□□ -1.4
SNF7YLR025W LIP2Q06005 328 aa6.31□□□□□ -1.4
SNF7YLR025W RRS1Q08746 203 aaKnown RBP6.31□□□□□ -1.4
SNF7YLR025W NCE102Q12207 173 aaRIP-Chip data6.31□□□□□ -1.4not detected
SNF7YLR025W SPO13P23624 291 aa6.3□□□□□ -1.4
SNF7YLR025W LDB16P25587 256 aa6.3□□□□□ -1.4
SNF7YLR025W ACP1P32463 125 aa6.3□□□□□ -1.4
SNF7YLR025W CLB6P32943 380 aa6.3□□□□□ -1.4
SNF7YLR025W MRPS5P33759 307 aa6.3□□□□□ -1.4
SNF7YLR025W SEC24P40482 926 aaKnown RBP6.3□□□□□ -1.4
SNF7YLR025W XPT1P47165 209 aa6.3□□□□□ -1.4
SNF7YLR025W TAF4P50105 388 aa6.3□□□□□ -1.4
SNF7YLR025W YDC1Q02896 317 aa6.3□□□□□ -1.4
SNF7YLR025W YDR391CQ04170 232 aa6.3□□□□□ -1.4
SNF7YLR025W YMR253CQ04835 414 aa6.3□□□□□ -1.4
SNF7YLR025W FIT3Q08907 204 aa6.3□□□□□ -1.4
SNF7YLR025W LAS17Q12446 633 aa6.3□□□□□ -1.4
SNF7YLR025W YLR415CO13578 112 aa6.29□□□□□ -1.4
SNF7YLR025W TRP4P07285 380 aaPredicted RBP6.29□□□□□ -1.4
SNF7YLR025W SEC62P21825 274 aa6.29□□□□□ -1.4
SNF7YLR025W ELO2P25358 347 aa6.29□□□□□ -1.4
SNF7YLR025W LSB5P25369 354 aa6.29□□□□□ -1.4
SNF7YLR025W RPL14AP36105 138 aaKnown RBP6.29□□□□□ -1.4
SNF7YLR025W ATP3P38077 311 aaKnown RBP6.29□□□□□ -1.4
SNF7YLR025W TRS20P38334 175 aa6.29□□□□□ -1.4
SNF7YLR025W SDH8P38345 138 aa6.29□□□□□ -1.4
SNF7YLR025W RPL14BP38754 138 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 122.5 ms