RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	LSO1	Q3E827	93 aa		5.15	□□□□□ -1.59
GDE1	YPL110C	SSA4	P22202	642 aa	Known RBP	5.14	□□□□□ -1.59
GDE1	YPL110C	EFB1	P32471	206 aa	Known RBP	5.14	□□□□□ -1.59
GDE1	YPL110C	YGL081W	P53156	320 aa		5.14	□□□□□ -1.59
GDE1	YPL110C	CLB5	P30283	435 aa		5.14	□□□□□ -1.59
GDE1	YPL110C	STE5	P32917	917 aa		5.14	□□□□□ -1.59
GDE1	YPL110C	ATG26	Q06321	1198 aa		5.14	□□□□□ -1.59
GDE1	YPL110C	APC2	Q12440	853 aa		5.14	□□□□□ -1.59
GDE1	YPL110C	CDC31	P06704	161 aa	Known RBP	5.13	□□□□□ -1.59
GDE1	YPL110C	RAD2	P07276	1031 aa		5.13	□□□□□ -1.59
GDE1	YPL110C	RKM3	P38222	552 aa		5.13	□□□□□ -1.59
GDE1	YPL110C	BNI5	P53890	448 aa	Known RBP	5.13	□□□□□ -1.59
GDE1	YPL110C	HSP42	Q12329	375 aa		5.13	□□□□□ -1.59
GDE1	YPL110C	MPE1	P35728	441 aa	Known RBP	5.13	□□□□□ -1.59
GDE1	YPL110C	COG8	Q04632	607 aa		5.13	□□□□□ -1.59
GDE1	YPL110C	HOS2	P53096	452 aa	Predicted RBP	5.13	□□□□□ -1.59
GDE1	YPL110C	GIR2	Q03768	265 aa	Predicted RBP	5.13	□□□□□ -1.59
GDE1	YPL110C	UBX5	Q06682	500 aa		5.13	□□□□□ -1.59
GDE1	YPL110C	SEC39	Q12745	709 aa		5.13	□□□□□ -1.59
GDE1	YPL110C	RPA135	P22138	1203 aa	Known RBP	5.12	□□□□□ -1.59
GDE1	YPL110C	PPH3	P32345	308 aa		5.12	□□□□□ -1.59
GDE1	YPL110C	BLI1	P35727	113 aa		5.12	□□□□□ -1.59
GDE1	YPL110C	VPS70	P47161	811 aa		5.12	□□□□□ -1.59
GDE1	YPL110C	RIX7	Q07844	837 aa	Known RBP	5.12	□□□□□ -1.59
GDE1	YPL110C	ZUO1	P32527	433 aa	Known RBP	5.12	□□□□□ -1.59
GDE1	YPL110C	IES2	P40154	320 aa		5.12	□□□□□ -1.59
GDE1	YPL110C	ALD2	P47771	506 aa		5.12	□□□□□ -1.59
GDE1	YPL110C	BRF1	P29056	596 aa		5.12	□□□□□ -1.59
GDE1	YPL110C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
GDE1	YPL110C	YDR338C	Q05497	695 aa		5.12	□□□□□ -1.59
GDE1	YPL110C	SET1	P38827	1080 aa	Known RBP	5.11	□□□□□ -1.59
GDE1	YPL110C	HPC2	Q01448	625 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	RAD9	P14737	1309 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	GLC3	P32775	704 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	YAF9	P53930	226 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	YLR257W	Q06146	321 aa	Known RBP	5.11	□□□□□ -1.59
GDE1	YPL110C	HMI1	Q12039	706 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	YOR093C	Q12275	1648 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	BUD14	P27637	709 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	SEC6	P32844	805 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	YPP1	P46951	817 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	UBP10	P53874	792 aa	Predicted RBP	5.11	□□□□□ -1.59
GDE1	YPL110C	RNT1	Q02555	471 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	VPS60	Q03390	229 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	RSC2	Q06488	889 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	MDM38	Q08179	573 aa		5.11	□□□□□ -1.59
GDE1	YPL110C	OPI1	P21957	404 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	RAM2	P29703	316 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	MRF1	P30775	413 aa	Predicted RBP	5.1	□□□□□ -1.59
GDE1	YPL110C	GLN1	P32288	370 aa	Known RBP	5.1	□□□□□ -1.59
GDE1	YPL110C	MPH1	P40562	993 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	RSC1	P53236	928 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	DNF3	Q12674	1656 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	VMR1	P38735	1592 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	SPT5	P27692	1063 aa	Known RBP	5.1	□□□□□ -1.59
GDE1	YPL110C	PAP2	P53632	584 aa	Known RBP	5.1	□□□□□ -1.59
GDE1	YPL110C	YAH1	Q12184	172 aa	Known RBP	5.1	□□□□□ -1.59
GDE1	YPL110C	CAT8	P39113	1433 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	NMD3	P38861	518 aa	Known RBP	5.1	□□□□□ -1.59
GDE1	YPL110C	ALD4	P46367	519 aa	Known RBP	5.1	□□□□□ -1.59
GDE1	YPL110C	YRM1	Q12340	786 aa		5.1	□□□□□ -1.59
GDE1	YPL110C	BDP1	P46678	594 aa		5.09	□□□□□ -1.59
GDE1	YPL110C	NUP42	P49686	430 aa	Known RBP	5.09	□□□□□ -1.59
GDE1	YPL110C	ITC1	P53125	1264 aa		5.09	□□□□□ -1.59
GDE1	YPL110C	NUP188	P52593	1655 aa	Known RBP	5.09	□□□□□ -1.59
GDE1	YPL110C	HMG1	P12683	1054 aa		5.09	□□□□□ -1.59
GDE1	YPL110C	PHO84	P25297	587 aa	Known RBP	5.09	□□□□□ -1.59
GDE1	YPL110C	ELM1	P32801	640 aa		5.09	□□□□□ -1.59
GDE1	YPL110C	NDC80	P40460	691 aa		5.09	□□□□□ -1.59
GDE1	YPL110C	CLP1	Q08685	445 aa	Predicted RBP	5.09	□□□□□ -1.59
GDE1	YPL110C	GCD6	P32501	712 aa	Known RBP	5.09	□□□□□ -1.6
GDE1	YPL110C	SWH1	P35845	1188 aa		5.09	□□□□□ -1.6
GDE1	YPL110C	TCD1	P38756	429 aa		5.09	□□□□□ -1.6
GDE1	YPL110C	ERP2	P39704	215 aa		5.09	□□□□□ -1.6
GDE1	YPL110C	SDS3	P40505	327 aa		5.09	□□□□□ -1.6
GDE1	YPL110C	PDR15	Q04182	1529 aa	Known RBP	5.08	□□□□□ -1.6
GDE1	YPL110C	PUP2	P32379	260 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	EFM2	P38347	419 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	PET100	P38958	111 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	UBP12	P39538	1254 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	BNI4	P53858	892 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	ADE12	P80210	433 aa	Known RBP	5.08	□□□□□ -1.6
GDE1	YPL110C	SLP1	Q12232	587 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	HEM3	P28789	327 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	KNS1	P32350	737 aa	Predicted RBP	5.08	□□□□□ -1.6
GDE1	YPL110C	EXO84	P38261	753 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	APC5	Q08683	685 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	SLX4	Q12098	748 aa		5.08	□□□□□ -1.6
GDE1	YPL110C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.07	□□□□□ -1.6
GDE1	YPL110C	SSK22	P25390	1331 aa	Predicted RBP	5.07	□□□□□ -1.6
GDE1	YPL110C	SNF2	P22082	1703 aa		5.07	□□□□□ -1.6
GDE1	YPL110C	CEF1	Q03654	590 aa	Predicted RBP	5.07	□□□□□ -1.6
GDE1	YPL110C	TCB1	Q12466	1186 aa		5.07	□□□□□ -1.6
GDE1	YPL110C	PBS2	P08018	668 aa		5.07	□□□□□ -1.6
GDE1	YPL110C	HGH1	P48362	394 aa	Known RBP	5.07	□□□□□ -1.6
GDE1	YPL110C	TFB3	Q03290	321 aa		5.07	□□□□□ -1.6
GDE1	YPL110C	RUD3	Q12234	484 aa	Known RBP	5.07	□□□□□ -1.6
GDE1	YPL110C	CEX1	Q12453	761 aa		5.07	□□□□□ -1.6
GDE1	YPL110C	RAD50	P12753	1312 aa		5.07	□□□□□ -1.6
GDE1	YPL110C	GEA1	P47102	1408 aa	Predicted RBP	5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms